; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G001420 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G001420
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCopper transport protein like
Genome locationchr04:1606825..1608515
RNA-Seq ExpressionLsi04G001420
SyntenyLsi04G001420
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA
IPR036163 - Heavy metal-associated domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648832.1 hypothetical protein Csa_008416 [Cucumis sativus]7.0e-3390.32Show/hide
Query:  TTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYWEDDAPAAPAAEATPAPAEAEAKPAETVAA
        TTVLKVAMSCQGCVGAVKRVLGKLEGVET+DIDIDAQKVTVKGNV  DVVFQTVSKTGKKTAYWE+DA AAPA  ATPAPAEAEAKPAE +AA
Subjt:  TTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYWEDDAPAAPAAEATPAPAEAEAKPAETVAA

XP_004150491.1 copper transport protein ATX1 [Cucumis sativus]1.7e-3490.62Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYWEDDAPAAPAAEATPAPAEAEAKPAETVAA
        MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVET+DIDIDAQKVTVKGNV  DVVFQTVSKTGKKTAYWE+DA AAPA  ATPAPAEAEAKPAE +AA
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYWEDDAPAAPAAEATPAPAEAEAKPAETVAA

XP_008446769.1 PREDICTED: copper transport protein ATX1-like [Cucumis melo]3.3e-3591.75Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYWEDDAPAAPAAEATPAPAEAEAKPAETVAAA
        MSQTTVLKVAMSCQGCVGAVKRVLGKLEGV+TFDIDIDAQKVTVKGNV  DVVFQTVSKTGKKTAYWEDDA AAPA  ATPAPAEAEAKPAE +AAA
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYWEDDAPAAPAAEATPAPAEAEAKPAETVAAA

XP_022150677.1 copper transport protein ATX1 [Momordica charantia]1.8e-3385.57Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYWEDDAPAAPAAEATPAPAEAEAKPAETVAAA
        MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVE+FD+DIDAQKVTVKG VG DVVFQTVSKTGKKT++WE +AP   A EA PAPAEAEAKPAE VAAA
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYWEDDAPAAPAAEATPAPAEAEAKPAETVAAA

XP_038893429.1 copper transport protein ATX1-like [Benincasa hispida]4.4e-3589.11Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYWEDDAPAAPAAEAT----PAPAEAEAKPAETVAA
        MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVE FDIDIDAQKVTVKGNV  +VVFQTVSKTGKKTAYWE+DAPAA A EAT    PAPAEAEAKPAETVAA
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYWEDDAPAAPAAEAT----PAPAEAEAKPAETVAA

Query:  A
        A
Subjt:  A

TrEMBL top hitse value%identityAlignment
A0A0A0KTF7 Copper chaperone8.0e-3590.62Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYWEDDAPAAPAAEATPAPAEAEAKPAETVAA
        MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVET+DIDIDAQKVTVKGNV  DVVFQTVSKTGKKTAYWE+DA AAPA  ATPAPAEAEAKPAE +AA
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYWEDDAPAAPAAEATPAPAEAEAKPAETVAA

A0A1S3BFW4 copper transport protein ATX1-like1.6e-3591.75Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYWEDDAPAAPAAEATPAPAEAEAKPAETVAAA
        MSQTTVLKVAMSCQGCVGAVKRVLGKLEGV+TFDIDIDAQKVTVKGNV  DVVFQTVSKTGKKTAYWEDDA AAPA  ATPAPAEAEAKPAE +AAA
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYWEDDAPAAPAAEATPAPAEAEAKPAETVAAA

A0A5A7SZ31 Copper transport protein ATX1-like1.6e-3591.75Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYWEDDAPAAPAAEATPAPAEAEAKPAETVAAA
        MSQTTVLKVAMSCQGCVGAVKRVLGKLEGV+TFDIDIDAQKVTVKGNV  DVVFQTVSKTGKKTAYWEDDA AAPA  ATPAPAEAEAKPAE +AAA
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYWEDDAPAAPAAEATPAPAEAEAKPAETVAAA

A0A6J1DBD6 copper transport protein ATX18.9e-3485.57Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYWEDDAPAAPAAEATPAPAEAEAKPAETVAAA
        MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVE+FD+DIDAQKVTVKG VG DVVFQTVSKTGKKT++WE +AP   A EA PAPAEAEAKPAE VAAA
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYWEDDAPAAPAAEATPAPAEAEAKPAETVAAA

A0A6J1HTV3 copper transport protein ATX1-like isoform X31.3e-3280.56Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYWEDDAP---------AAPAAEATPA---PAEAEA
        MSQTTVLKVAMSCQGCVGAV+RVLGKLEGV+ FDIDIDAQKVTVKGNV  DVVFQTVSKTGKKTAYWED+AP         AAPA EA PA   PAEAEA
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYWEDDAP---------AAPAAEATPA---PAEAEA

Query:  KPAETVAA
        KPAE+VAA
Subjt:  KPAETVAA

SwissProt top hitse value%identityAlignment
B3H6D0 Heavy metal-associated isoprenylated plant protein 451.9e-0947.54Show/hide
Query:  LKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYW
        L V M C+GC   V+R + KL+GV+T +ID+D QKVTV G V  + V + V +TG+   YW
Subjt:  LKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYW

F4JZL7 Heavy metal-associated isoprenylated plant protein 331.6e-0847.69Show/hide
Query:  QTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYW
        QT VLKV + C GC   VK++L K+EGV T  ID +  KVTV GNV   V+ + + K+GK    W
Subjt:  QTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYW

O82089 Copper transport protein CCH3.6e-2465.05Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYWEDDAPAAPAAEATP-------APAEAEAKPAET
        M+QT VLKV MSCQGCVGAV RVLGK+EGVE+FDIDI  QKVTVKGNV  + VFQTVSKTGKKT+YW  +A A P AEA P          EAE K    
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYWEDDAPAAPAAEATP-------APAEAEAKPAET

Query:  VAA
        V A
Subjt:  VAA

Q84J88 Heavy metal-associated isoprenylated plant protein 361.2e-0840.62Show/hide
Query:  TTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYW
        T VL+V++ C+GC   +K++L K++GV T +ID+  QKVTV GNV  +++ + + K G+    W
Subjt:  TTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYW

Q94BT9 Copper transport protein ATX18.0e-2472.37Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYWEDDAPAAPA
        MSQT VL+VAM+C+GCVGAVKRVLGK+EGVE+FD+DI  QKVTVKGNV  D V QTV+KTGKKTA+WE +   A A
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYWEDDAPAAPA

Arabidopsis top hitse value%identityAlignment
AT1G66240.1 homolog of anti-oxidant 15.7e-2572.37Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYWEDDAPAAPA
        MSQT VL+VAM+C+GCVGAVKRVLGK+EGVE+FD+DI  QKVTVKGNV  D V QTV+KTGKKTA+WE +   A A
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYWEDDAPAAPA

AT1G66240.2 homolog of anti-oxidant 16.5e-2171.21Show/hide
Query:  MSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYWEDDAPAAPA
        M+C+GCVGAVKRVLGK+EGVE+FD+DI  QKVTVKGNV  D V QTV+KTGKKTA+WE +   A A
Subjt:  MSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYWEDDAPAAPA

AT3G56240.1 copper chaperone2.6e-2565.05Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYWEDDAPAAPAAEATP-------APAEAEAKPAET
        M+QT VLKV MSCQGCVGAV RVLGK+EGVE+FDIDI  QKVTVKGNV  + VFQTVSKTGKKT+YW  +A A P AEA P          EAE K    
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYWEDDAPAAPAAEATP-------APAEAEAKPAET

Query:  VAA
        V A
Subjt:  VAA

AT3G56891.1 Heavy metal transport/detoxification superfamily protein1.4e-1047.54Show/hide
Query:  LKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYW
        L V M C+GC   V+R + KL+GV+T +ID+D QKVTV G V  + V + V +TG+   YW
Subjt:  LKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYW

AT5G27690.1 Heavy metal transport/detoxification superfamily protein8.8e-1040.62Show/hide
Query:  TTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYW
        T VL+V++ C+GC   +K++L K++GV T +ID+  QKVTV GNV  +++ + + K G+    W
Subjt:  TTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCAGACTACTGTCCTCAAGGTTGCTATGTCATGTCAAGGCTGCGTTGGGGCCGTCAAAAGGGTCTTGGGAAAACTGGAAGGAGTCGAGACGTTTGACATCGATAT
AGATGCACAAAAGGTGACTGTGAAAGGCAATGTAGGGAGCGATGTAGTTTTCCAAACTGTTTCGAAAACTGGGAAGAAGACTGCCTACTGGGAAGATGATGCGCCGGCAG
CACCTGCAGCAGAGGCAACCCCAGCACCGGCTGAAGCAGAAGCTAAACCTGCCGAGACTGTGGCTGCTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCAGACTACTGTCCTCAAGGTTGCTATGTCATGTCAAGGCTGCGTTGGGGCCGTCAAAAGGGTCTTGGGAAAACTGGAAGGAGTCGAGACGTTTGACATCGATAT
AGATGCACAAAAGGTGACTGTGAAAGGCAATGTAGGGAGCGATGTAGTTTTCCAAACTGTTTCGAAAACTGGGAAGAAGACTGCCTACTGGGAAGATGATGCGCCGGCAG
CACCTGCAGCAGAGGCAACCCCAGCACCGGCTGAAGCAGAAGCTAAACCTGCCGAGACTGTGGCTGCTGCTTAA
Protein sequenceShow/hide protein sequence
MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVGSDVVFQTVSKTGKKTAYWEDDAPAAPAAEATPAPAEAEAKPAETVAAA