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Lsi04G001530 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G001530
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDUF2996 family protein
Genome locationchr04:1726405..1729039
RNA-Seq ExpressionLsi04G001530
SyntenyLsi04G001530
Gene Ontology termsNA
InterPro domainsIPR021374 - Protein of unknown function DUF2996


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135038.1 uncharacterized protein LOC101205552 [Cucumis sativus]3.1e-5062.89Show/hide
Query:  MAMILKGGRGIGVSTATYFPHNSKPSPVFSVH-------------------TKSFLSVAAEPKEIKTVPKEAPAKAKPPAKAPVKPLPELMEEDVIPSLK
        MAMILKGGRGIGVSTATYFPHN KPSP+FS+H                     S  +VAAEPKEIKTVPKEAPAKAKPPAKAPVKPLPELM+E+VIPSLK
Subjt:  MAMILKGGRGIGVSTATYFPHNSKPSPVFSVH-------------------TKSFLSVAAEPKEIKTVPKEAPAKAKPPAKAPVKPLPELMEEDVIPSLK

Query:  AILEAQTDVSDIELSFQDDRV-----------------------------------RSSVEPFLVDEKKVTAKLVVFWIEKRLAAQGIIPVWKD
        AILEAQ DVSD+ LSFQDDR+                                    SSVEPFLVDEKKV+ KL+VFWIEKRLAAQGIIPVWKD
Subjt:  AILEAQTDVSDIELSFQDDRV-----------------------------------RSSVEPFLVDEKKVTAKLVVFWIEKRLAAQGIIPVWKD

XP_008446754.1 PREDICTED: uncharacterized protein LOC103489386 [Cucumis melo]1.3e-4863.08Show/hide
Query:  MAMILKGGRGIGVSTATYFP-HNSKPSPVFSVH-------------------TKSFLSVAAEPKEIKTVPKEAPAKAKPPAKAPVKPLPELMEEDVIPSL
        MAMILKGGRG+GVSTATYFP HN KPSP+FS+H                     S  +VAAEPKEIKTVPKEAPAKAKPPAKA VKPLPELMEE+VIPSL
Subjt:  MAMILKGGRGIGVSTATYFP-HNSKPSPVFSVH-------------------TKSFLSVAAEPKEIKTVPKEAPAKAKPPAKAPVKPLPELMEEDVIPSL

Query:  KAILEAQTDVSDIELSFQDDRV-----------------------------------RSSVEPFLVDEKKVTAKLVVFWIEKRLAAQGIIPVWKD
        KAILEAQ DV DIELSFQDDR+                                    SSVEPFLVDEKKV+AKL+VFWIEKRLAAQGIIPVWKD
Subjt:  KAILEAQTDVSDIELSFQDDRV-----------------------------------RSSVEPFLVDEKKVTAKLVVFWIEKRLAAQGIIPVWKD

XP_022956513.1 uncharacterized protein LOC111458230 [Cucurbita moschata]1.5e-4963.73Show/hide
Query:  MAMILKGGRGIGVSTATYFPHNSKPSPVFSVHT------------------KSFLSVAAEPKEIKTVPKEAPAKAKPPAKAPVKPLPELMEEDVIPSLKA
        MAMILKGG GIGVSTATYFP NSKPSPVFSVHT                   S  +V+AEPKEIK V KEAPAK KPPAKAPVKPLP++MEEDVIPSLKA
Subjt:  MAMILKGGRGIGVSTATYFPHNSKPSPVFSVHT------------------KSFLSVAAEPKEIKTVPKEAPAKAKPPAKAPVKPLPELMEEDVIPSLKA

Query:  ILEAQTDVSDIELSFQDDRV-----------------------------------RSSVEPFLVDEKKVTAKLVVFWIEKRLAAQGIIPVWKD
        ILEAQ DV+DIELSFQDDR+                                    SSVEPFLVDEKKVTAKL+VFWIEKRLAAQGIIPVWKD
Subjt:  ILEAQTDVSDIELSFQDDRV-----------------------------------RSSVEPFLVDEKKVTAKLVVFWIEKRLAAQGIIPVWKD

XP_022986445.1 uncharacterized protein LOC111484155 [Cucurbita maxima]1.5e-4963.73Show/hide
Query:  MAMILKGGRGIGVSTATYFPHNSKPSPVFSVHT------------------KSFLSVAAEPKEIKTVPKEAPAKAKPPAKAPVKPLPELMEEDVIPSLKA
        MAMILKGG GIGVSTATYFP NSKPSPVFSVHT                   S  +V+AEPKEIK V KEAPAK KPPAKAPVKPLP++MEEDVIPSLKA
Subjt:  MAMILKGGRGIGVSTATYFPHNSKPSPVFSVHT------------------KSFLSVAAEPKEIKTVPKEAPAKAKPPAKAPVKPLPELMEEDVIPSLKA

Query:  ILEAQTDVSDIELSFQDDRV-----------------------------------RSSVEPFLVDEKKVTAKLVVFWIEKRLAAQGIIPVWKD
        ILEAQ DV+DIELSFQDDR+                                    SSVEPFLVDEKKVTAKL+VFWIEKRLAAQGIIPVWKD
Subjt:  ILEAQTDVSDIELSFQDDRV-----------------------------------RSSVEPFLVDEKKVTAKLVVFWIEKRLAAQGIIPVWKD

XP_038891519.1 uncharacterized protein LOC120080914 isoform X1 [Benincasa hispida]2.0e-5265.98Show/hide
Query:  MAMILKGGRGIGVSTATYFPHNSKPSPVFSVHT-------------------KSFLSVAAEPKEIKTVPKEAPAKAKPPAKAPVKPLPELMEEDVIPSLK
        MAMILKGGRGIGVSTATYFPHNSKPSPVFS+HT                    S  +VAAEPKEIKTVPKEAPAKAKPPAKAPVKPLPELMEEDVIPSLK
Subjt:  MAMILKGGRGIGVSTATYFPHNSKPSPVFSVHT-------------------KSFLSVAAEPKEIKTVPKEAPAKAKPPAKAPVKPLPELMEEDVIPSLK

Query:  AILEAQTDVSDIELSFQDDRV-----------------------------------RSSVEPFLVDEKKVTAKLVVFWIEKRLAAQGIIPVWKD
        AILEAQ DVSDI LSFQD+R+                                    SSVEPFLVDEKKVTAKL+VFWIEKRLAAQGIIPVWK+
Subjt:  AILEAQTDVSDIELSFQDDRV-----------------------------------RSSVEPFLVDEKKVTAKLVVFWIEKRLAAQGIIPVWKD

TrEMBL top hitse value%identityAlignment
A0A0A0KUS0 Uncharacterized protein1.5e-5062.89Show/hide
Query:  MAMILKGGRGIGVSTATYFPHNSKPSPVFSVH-------------------TKSFLSVAAEPKEIKTVPKEAPAKAKPPAKAPVKPLPELMEEDVIPSLK
        MAMILKGGRGIGVSTATYFPHN KPSP+FS+H                     S  +VAAEPKEIKTVPKEAPAKAKPPAKAPVKPLPELM+E+VIPSLK
Subjt:  MAMILKGGRGIGVSTATYFPHNSKPSPVFSVH-------------------TKSFLSVAAEPKEIKTVPKEAPAKAKPPAKAPVKPLPELMEEDVIPSLK

Query:  AILEAQTDVSDIELSFQDDRV-----------------------------------RSSVEPFLVDEKKVTAKLVVFWIEKRLAAQGIIPVWKD
        AILEAQ DVSD+ LSFQDDR+                                    SSVEPFLVDEKKV+ KL+VFWIEKRLAAQGIIPVWKD
Subjt:  AILEAQTDVSDIELSFQDDRV-----------------------------------RSSVEPFLVDEKKVTAKLVVFWIEKRLAAQGIIPVWKD

A0A1S3BGH0 uncharacterized protein LOC1034893866.3e-4963.08Show/hide
Query:  MAMILKGGRGIGVSTATYFP-HNSKPSPVFSVH-------------------TKSFLSVAAEPKEIKTVPKEAPAKAKPPAKAPVKPLPELMEEDVIPSL
        MAMILKGGRG+GVSTATYFP HN KPSP+FS+H                     S  +VAAEPKEIKTVPKEAPAKAKPPAKA VKPLPELMEE+VIPSL
Subjt:  MAMILKGGRGIGVSTATYFP-HNSKPSPVFSVH-------------------TKSFLSVAAEPKEIKTVPKEAPAKAKPPAKAPVKPLPELMEEDVIPSL

Query:  KAILEAQTDVSDIELSFQDDRV-----------------------------------RSSVEPFLVDEKKVTAKLVVFWIEKRLAAQGIIPVWKD
        KAILEAQ DV DIELSFQDDR+                                    SSVEPFLVDEKKV+AKL+VFWIEKRLAAQGIIPVWKD
Subjt:  KAILEAQTDVSDIELSFQDDRV-----------------------------------RSSVEPFLVDEKKVTAKLVVFWIEKRLAAQGIIPVWKD

A0A5A7SZ21 DUF2996 family protein6.3e-4963.08Show/hide
Query:  MAMILKGGRGIGVSTATYFP-HNSKPSPVFSVH-------------------TKSFLSVAAEPKEIKTVPKEAPAKAKPPAKAPVKPLPELMEEDVIPSL
        MAMILKGGRG+GVSTATYFP HN KPSP+FS+H                     S  +VAAEPKEIKTVPKEAPAKAKPPAKA VKPLPELMEE+VIPSL
Subjt:  MAMILKGGRGIGVSTATYFP-HNSKPSPVFSVH-------------------TKSFLSVAAEPKEIKTVPKEAPAKAKPPAKAPVKPLPELMEEDVIPSL

Query:  KAILEAQTDVSDIELSFQDDRV-----------------------------------RSSVEPFLVDEKKVTAKLVVFWIEKRLAAQGIIPVWKD
        KAILEAQ DV DIELSFQDDR+                                    SSVEPFLVDEKKV+AKL+VFWIEKRLAAQGIIPVWKD
Subjt:  KAILEAQTDVSDIELSFQDDRV-----------------------------------RSSVEPFLVDEKKVTAKLVVFWIEKRLAAQGIIPVWKD

A0A6J1GX25 uncharacterized protein LOC1114582307.5e-5063.73Show/hide
Query:  MAMILKGGRGIGVSTATYFPHNSKPSPVFSVHT------------------KSFLSVAAEPKEIKTVPKEAPAKAKPPAKAPVKPLPELMEEDVIPSLKA
        MAMILKGG GIGVSTATYFP NSKPSPVFSVHT                   S  +V+AEPKEIK V KEAPAK KPPAKAPVKPLP++MEEDVIPSLKA
Subjt:  MAMILKGGRGIGVSTATYFPHNSKPSPVFSVHT------------------KSFLSVAAEPKEIKTVPKEAPAKAKPPAKAPVKPLPELMEEDVIPSLKA

Query:  ILEAQTDVSDIELSFQDDRV-----------------------------------RSSVEPFLVDEKKVTAKLVVFWIEKRLAAQGIIPVWKD
        ILEAQ DV+DIELSFQDDR+                                    SSVEPFLVDEKKVTAKL+VFWIEKRLAAQGIIPVWKD
Subjt:  ILEAQTDVSDIELSFQDDRV-----------------------------------RSSVEPFLVDEKKVTAKLVVFWIEKRLAAQGIIPVWKD

A0A6J1JE31 uncharacterized protein LOC1114841557.5e-5063.73Show/hide
Query:  MAMILKGGRGIGVSTATYFPHNSKPSPVFSVHT------------------KSFLSVAAEPKEIKTVPKEAPAKAKPPAKAPVKPLPELMEEDVIPSLKA
        MAMILKGG GIGVSTATYFP NSKPSPVFSVHT                   S  +V+AEPKEIK V KEAPAK KPPAKAPVKPLP++MEEDVIPSLKA
Subjt:  MAMILKGGRGIGVSTATYFPHNSKPSPVFSVHT------------------KSFLSVAAEPKEIKTVPKEAPAKAKPPAKAPVKPLPELMEEDVIPSLKA

Query:  ILEAQTDVSDIELSFQDDRV-----------------------------------RSSVEPFLVDEKKVTAKLVVFWIEKRLAAQGIIPVWKD
        ILEAQ DV+DIELSFQDDR+                                    SSVEPFLVDEKKVTAKL+VFWIEKRLAAQGIIPVWKD
Subjt:  ILEAQTDVSDIELSFQDDRV-----------------------------------RSSVEPFLVDEKKVTAKLVVFWIEKRLAAQGIIPVWKD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G04039.1 unknown protein2.7e-2046.62Show/hide
Query:  KSFLSVAAEPKEIKTVPKEA----PA-KAKPPAKAP--VKPLPELMEEDVIPSLKAILEAQTDVSDIELSFQDDRVR-----------------------
        +S  S  A  K+ K   +E+    PA K KP AKA    KPL ++MEEDVIP L+AILE+Q D+SDI+LSFQDD++                        
Subjt:  KSFLSVAAEPKEIKTVPKEA----PA-KAKPPAKAP--VKPLPELMEEDVIPSLKAILEAQTDVSDIELSFQDDRVR-----------------------

Query:  -------------SSVEPFLVDEKKVTAKLVVFWIEKRLAAQGIIPVW
                     S+VEPFLVDE+K TA  VVFW+EKRLAAQGIIPVW
Subjt:  -------------SSVEPFLVDEKKVTAKLVVFWIEKRLAAQGIIPVW

AT2G04039.2 unknown protein7.2e-2150.41Show/hide
Query:  KAKPPAKAP--VKPLPELMEEDVIPSLKAILEAQTDVSDIELSFQDDRVR------------------------------------SSVEPFLVDEKKVT
        K KP AKA    KPL ++MEEDVIP L+AILE+Q D+SDI+LSFQDD++                                     S+VEPFLVDE+K T
Subjt:  KAKPPAKAP--VKPLPELMEEDVIPSLKAILEAQTDVSDIELSFQDDRVR------------------------------------SSVEPFLVDEKKVT

Query:  AKLVVFWIEKRLAAQGIIPVW
        A  VVFW+EKRLAAQGIIPVW
Subjt:  AKLVVFWIEKRLAAQGIIPVW

AT2G04039.3 unknown protein5.4e-0852.63Show/hide
Query:  KSFLSVAAEPKEIKTVPKEA----PA-KAKPPAKAP--VKPLPELMEEDVIPSLKAILEAQTDVSDIELSFQDDRV
        +S  S  A  K+ K   +E+    PA K KP AKA    KPL ++MEEDVIP L+AILE+Q D+SDI+LSFQDD++
Subjt:  KSFLSVAAEPKEIKTVPKEA----PA-KAKPPAKAP--VKPLPELMEEDVIPSLKAILEAQTDVSDIELSFQDDRV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATGATTCTCAAAGGAGGACGCGGAATTGGAGTTTCAACTGCTACTTACTTTCCTCACAATTCTAAACCATCCCCAGTTTTCTCCGTTCACACGAAGTCTTTTCT
ATCAGTTGCTGCCGAGCCAAAGGAGATAAAGACAGTTCCGAAGGAAGCTCCAGCAAAGGCCAAACCGCCAGCAAAAGCGCCAGTGAAGCCACTGCCTGAGTTGATGGAGG
AAGATGTCATACCTTCGCTGAAAGCGATTCTTGAAGCACAAACCGATGTCTCCGATATTGAATTATCATTCCAAGATGATAGAGTTAGAAGCTCAGTTGAACCCTTTCTG
GTCGATGAGAAAAAAGTTACAGCAAAGCTTGTAGTTTTCTGGATTGAGAAGCGCTTGGCTGCACAAGGAATTATCCCAGTCTGGAAAGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATGATTCTCAAAGGAGGACGCGGAATTGGAGTTTCAACTGCTACTTACTTTCCTCACAATTCTAAACCATCCCCAGTTTTCTCCGTTCACACGAAGTCTTTTCT
ATCAGTTGCTGCCGAGCCAAAGGAGATAAAGACAGTTCCGAAGGAAGCTCCAGCAAAGGCCAAACCGCCAGCAAAAGCGCCAGTGAAGCCACTGCCTGAGTTGATGGAGG
AAGATGTCATACCTTCGCTGAAAGCGATTCTTGAAGCACAAACCGATGTCTCCGATATTGAATTATCATTCCAAGATGATAGAGTTAGAAGCTCAGTTGAACCCTTTCTG
GTCGATGAGAAAAAAGTTACAGCAAAGCTTGTAGTTTTCTGGATTGAGAAGCGCTTGGCTGCACAAGGAATTATCCCAGTCTGGAAAGACTAA
Protein sequenceShow/hide protein sequence
MAMILKGGRGIGVSTATYFPHNSKPSPVFSVHTKSFLSVAAEPKEIKTVPKEAPAKAKPPAKAPVKPLPELMEEDVIPSLKAILEAQTDVSDIELSFQDDRVRSSVEPFL
VDEKKVTAKLVVFWIEKRLAAQGIIPVWKD