; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G002020 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G002020
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptiontetratricopeptide repeat protein 5-like
Genome locationchr04:2140776..2152360
RNA-Seq ExpressionLsi04G002020
SyntenyLsi04G002020
Gene Ontology termsNA
InterPro domainsIPR032076 - Tetratricopeptide repeat protein 5, OB fold domain
IPR038645 - TTC5, OB fold domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601256.1 Tetratricopeptide repeat protein 5, partial [Cucurbita argyrosperma subsp. sororia]1.2e-17862.31Show/hide
Query:  FHGPSSRRRRPSDHRRAPRCHGGVSDEENQKDIVEANLTVLRARMEDLRKKERRIPVPARREGLEFDNGCKYLSMSDGTKFDRDFDCKILKNFALISECL
        F+ PS  RRRPSDHRRAPRCHGGV DE NQKDIVEANLTVL+ARMEDLRKKERRIP+P R  G+E DNG +Y S  D        D K++KNFALIS CL
Subjt:  FHGPSSRRRRPSDHRRAPRCHGGVSDEENQKDIVEANLTVLRARMEDLRKKERRIPVPARREGLEFDNGCKYLSMSDGTKFDRDFDCKILKNFALISECL

Query:  EVVTTVGGAVGLVFVGGSLGICLVSLLLNDLPTQYLPASRLVVFAPRIVAVGRLTEQMCSEAMEDIFGKATAAVEELYHIRDTFFSVNPDDKTSKLRELS
        E                                 +LPAS LV  APR VAVGRLTE+MCSE  E+ F KATAAVEELYHIRDTFF VNPDDK SKLRELS
Subjt:  EVVTTVGGAVGLVFVGGSLGICLVSLLLNDLPTQYLPASRLVVFAPRIVAVGRLTEQMCSEAMEDIFGKATAAVEELYHIRDTFFSVNPDDKTSKLRELS

Query:  DLALKILDSIPP----------------------------------------------------------------------------------------
        DLA+KILDSI P                                                                                        
Subjt:  DLALKILDSIPP----------------------------------------------------------------------------------------

Query:  -----GTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHSKLLQSLKAYQNA------------------VNKYLENYDRALSGF
             GTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDH+KLLQSLKAYQNA                  VNKYLENY+RALSGF
Subjt:  -----GTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHSKLLQSLKAYQNA------------------VNKYLENYDRALSGF

Query:  EAAALKDPSLGATREVHKMVNLLDKLDNMLKAHAKTRRGASLPSSVDAVNSNFSYKRATVDQLSEGLNKTVAVTGKVLSFIKHDSLAPLYYLVCDSNQTC
        EAAALKDPSL ATREVHKMVNLLDKLDNMLKAHAKTRR  S  SSVD V+SN SYKRATVD LSEGLNK+VAV GKVL FIKHDSLAPLYYL+CDSNQ C
Subjt:  EAAALKDPSLGATREVHKMVNLLDKLDNMLKAHAKTRRGASLPSSVDAVNSNFSYKRATVDQLSEGLNKTVAVTGKVLSFIKHDSLAPLYYLVCDSNQTC

Query:  FVLSLYGMRNDTEKKMSSQVKEGDQITLPEPYYRNLDFSWKGKHYQFKSIRVDFLEQVIVNGKAPSAHQAVQASIYAQHKP
        FV+SLYGMRNDT       VK GDQITL EPYYRN DFSWKGKHYQF SIRVDFLEQV+VNGKAPSAHQAVQ SIYAQHKP
Subjt:  FVLSLYGMRNDTEKKMSSQVKEGDQITLPEPYYRNLDFSWKGKHYQFKSIRVDFLEQVIVNGKAPSAHQAVQASIYAQHKP

KAG7032049.1 Tetratricopeptide repeat protein 5, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-14060.49Show/hide
Query:  LPTQYLPASRLVVFAPRIVAVGRLTEQMCSEAMEDIFGKATAAVEELYHIRDTFFSVNPDDKTSKLRELSDLALKILDSIPP------------------
        + TQ+LPAS LV  APR VAVGRLTE+MCSE  E+ F KATAAVEELYHIRDTFF VNPDDK SKLRELSDLA+KILDSI P                  
Subjt:  LPTQYLPASRLVVFAPRIVAVGRLTEQMCSEAMEDIFGKATAAVEELYHIRDTFFSVNPDDKTSKLRELSDLALKILDSIPP------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------GTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHSKLLQSLKAYQNA------------------VNKYLENYDR
                  GTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDH+KLLQSLKAYQNA                  VNKYLENY+R
Subjt:  ----------GTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHSKLLQSLKAYQNA------------------VNKYLENYDR

Query:  ALSGFEAAALKDPSLGATREVHKMVNLLDKLDNMLKAHAKTRRGASLPSSVDAVNSNFSYKRATVDQLSEGLNKTVAVTGKVLSFIKHDSLAPLYYLVCD
        ALSGFEAAALKDPSL ATREVHKMVNLLDKLDNMLKAHAKTRR  S  SSVD V +N SYKRATVD LSEGLNK+VAV GKVL FIKHDSLAPLYYLVCD
Subjt:  ALSGFEAAALKDPSLGATREVHKMVNLLDKLDNMLKAHAKTRRGASLPSSVDAVNSNFSYKRATVDQLSEGLNKTVAVTGKVLSFIKHDSLAPLYYLVCD

Query:  SNQTCFVLSLYGMRNDTEKKMSSQVKEGDQITLPEPYYRNLDFSWKGKHYQFKSIRVDFLEQVIVNGKAPSAHQAVQASIYAQHKP
        SNQ CFV+SLYGMRNDT       VKEGDQITL EPYYRN DFSWKGKHYQF SIRVDFLEQV+VNGKAPSAHQAVQ SIYAQHKP
Subjt:  SNQTCFVLSLYGMRNDTEKKMSSQVKEGDQITLPEPYYRNLDFSWKGKHYQFKSIRVDFLEQVIVNGKAPSAHQAVQASIYAQHKP

XP_004135065.1 tetratricopeptide repeat protein 5 isoform X2 [Cucumis sativus]2.1e-13866.27Show/hide
Query:  MCSEAMEDIFGKATAAVEELYHIRDTFFSVNPDDKTSKLRELSDLALKILDSIPP---------------------------------------------
        M SEA E  F KATAAVEELY IRDTFF VNPDDKTSKLRELSDLALKILDSIPP                                             
Subjt:  MCSEAMEDIFGKATAAVEELYHIRDTFFSVNPDDKTSKLRELSDLALKILDSIPP---------------------------------------------

Query:  ------------------------------------------------GTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHSKL
                                                        GTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHSKL
Subjt:  ------------------------------------------------GTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHSKL

Query:  LQSLKAYQNA------------------VNKYLENYDRALSGFEAAALKDPSLGATREVHKMVNLLDKLDNMLKAHAKTRRGASLPSSVDAVNSNFSYKR
        LQSLKAYQNA                  VNKYLENYDRALSGFEAAALKDPSL ATREVHKMV LLDKLDNMLKAHAK+R+GAS PSSVDA++SNFSYKR
Subjt:  LQSLKAYQNA------------------VNKYLENYDRALSGFEAAALKDPSLGATREVHKMVNLLDKLDNMLKAHAKTRRGASLPSSVDAVNSNFSYKR

Query:  ATVDQLSEGLNKTVAVTGKVLSFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTEKKMSSQVKEGDQITLPEPYYRNLDFSWKGKHYQFKSIRVDFLEQ
        AT+  LSEGLNKTVAVTGKVL FIKHDSLAPLYYL CDSNQTCFVLSLYGMRNDT       VKEGDQITL EPYYRNL FSWKGKHY+FKSIRVDFLEQ
Subjt:  ATVDQLSEGLNKTVAVTGKVLSFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTEKKMSSQVKEGDQITLPEPYYRNLDFSWKGKHYQFKSIRVDFLEQ

Query:  VIVNGKAPSAHQAVQASIYAQHKP
        V+VNGKAPS HQAV+ASIYAQHKP
Subjt:  VIVNGKAPSAHQAVQASIYAQHKP

XP_008446684.1 PREDICTED: tetratricopeptide repeat protein 5-like isoform X3 [Cucumis melo]2.5e-13966.59Show/hide
Query:  MCSEAMEDIFGKATAAVEELYHIRDTFFSVNPDDKTSKLRELSDLALKILDSIPP---------------------------------------------
        MCSEA ED F KATAAVEELY IRDTFF VNPDDKTSKLRELSDLALKILDSIPP                                             
Subjt:  MCSEAMEDIFGKATAAVEELYHIRDTFFSVNPDDKTSKLRELSDLALKILDSIPP---------------------------------------------

Query:  ------------------------------------------------GTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHSKL
                                                        GTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHSKL
Subjt:  ------------------------------------------------GTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHSKL

Query:  LQSLKAYQNA------------------VNKYLENYDRALSGFEAAALKDPSLGATREVHKMVNLLDKLDNMLK----AHAKTRRGASLPSSVDAVNSNF
        LQSLKAYQNA                  VNKYLENY RALSGFEAAALKDPSL ATREVHKMV LLDKLDNMLK    AHAK+R+GAS PSSVDA++SNF
Subjt:  LQSLKAYQNA------------------VNKYLENYDRALSGFEAAALKDPSLGATREVHKMVNLLDKLDNMLK----AHAKTRRGASLPSSVDAVNSNF

Query:  SYKRATVDQLSEGLNKTVAVTGKVLSFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTEKKMSSQVKEGDQITLPEPYYRNLDFSWKGKHYQFKSIRVD
        SYKR T+D LSEGLNKTVAVTGKVL FIKHDSLAPLYYL CDSNQTCFVLSLYGMRNDT       VKEGDQITL EPYYRNLDFSWKGKHYQF SIRVD
Subjt:  SYKRATVDQLSEGLNKTVAVTGKVLSFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTEKKMSSQVKEGDQITLPEPYYRNLDFSWKGKHYQFKSIRVD

Query:  FLEQVIVNGKAPSAHQAVQASIYAQHKP
        FLEQVIVNGKAPSAHQAV+ASIYAQHKP
Subjt:  FLEQVIVNGKAPSAHQAVQASIYAQHKP

XP_038891369.1 tetratricopeptide repeat protein 5-like [Benincasa hispida]1.1e-14267.92Show/hide
Query:  MCSEAMEDIFGKATAAVEELYHIRDTFFSVNPDDKTSKLRELSDLALKILDSIPP---------------------------------------------
        MCSEA ED F KATAAVEELYHIRDTFF VNPDDKTSK RELSDLALKILDSIPP                                             
Subjt:  MCSEAMEDIFGKATAAVEELYHIRDTFFSVNPDDKTSKLRELSDLALKILDSIPP---------------------------------------------

Query:  ------------------------------------------------GTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHSKL
                                                        GTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHSKL
Subjt:  ------------------------------------------------GTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHSKL

Query:  LQSLKAYQNA------------------VNKYLENYDRALSGFEAAALKDPSLGATREVHKMVNLLDKLDNMLKAHAKTRRGASLPSSVDAVNSNFSYKR
        LQSLKAYQNA                  VNKYLENYDRALSGFEAAALKDPSL A REV KMVNLLDKLDNMLKAH KTRRGASLPSSVDA++SNFSYKR
Subjt:  LQSLKAYQNA------------------VNKYLENYDRALSGFEAAALKDPSLGATREVHKMVNLLDKLDNMLKAHAKTRRGASLPSSVDAVNSNFSYKR

Query:  ATVDQLSEGLNKTVAVTGKVLSFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTEKKMSSQVKEGDQITLPEPYYRNLDFSWKGKHYQFKSIRVDFLEQ
        ATVD LSEGLNKTVAVTGKVL FIKHDSLAPLYYLVCDSNQTCF+LSLYGMRNDT       VKEGDQITL EPYYRNLDFSWKGKHYQFKS RVDFLEQ
Subjt:  ATVDQLSEGLNKTVAVTGKVLSFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTEKKMSSQVKEGDQITLPEPYYRNLDFSWKGKHYQFKSIRVDFLEQ

Query:  VIVNGKAPSAHQAVQASIYAQHKP
        +IVNGKAPSA QAVQASIYAQHKP
Subjt:  VIVNGKAPSAHQAVQASIYAQHKP

TrEMBL top hitse value%identityAlignment
A0A0A0KUM0 Uncharacterized protein1.0e-13866.27Show/hide
Query:  MCSEAMEDIFGKATAAVEELYHIRDTFFSVNPDDKTSKLRELSDLALKILDSIPP---------------------------------------------
        M SEA E  F KATAAVEELY IRDTFF VNPDDKTSKLRELSDLALKILDSIPP                                             
Subjt:  MCSEAMEDIFGKATAAVEELYHIRDTFFSVNPDDKTSKLRELSDLALKILDSIPP---------------------------------------------

Query:  ------------------------------------------------GTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHSKL
                                                        GTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHSKL
Subjt:  ------------------------------------------------GTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHSKL

Query:  LQSLKAYQNA------------------VNKYLENYDRALSGFEAAALKDPSLGATREVHKMVNLLDKLDNMLKAHAKTRRGASLPSSVDAVNSNFSYKR
        LQSLKAYQNA                  VNKYLENYDRALSGFEAAALKDPSL ATREVHKMV LLDKLDNMLKAHAK+R+GAS PSSVDA++SNFSYKR
Subjt:  LQSLKAYQNA------------------VNKYLENYDRALSGFEAAALKDPSLGATREVHKMVNLLDKLDNMLKAHAKTRRGASLPSSVDAVNSNFSYKR

Query:  ATVDQLSEGLNKTVAVTGKVLSFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTEKKMSSQVKEGDQITLPEPYYRNLDFSWKGKHYQFKSIRVDFLEQ
        AT+  LSEGLNKTVAVTGKVL FIKHDSLAPLYYL CDSNQTCFVLSLYGMRNDT       VKEGDQITL EPYYRNL FSWKGKHY+FKSIRVDFLEQ
Subjt:  ATVDQLSEGLNKTVAVTGKVLSFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTEKKMSSQVKEGDQITLPEPYYRNLDFSWKGKHYQFKSIRVDFLEQ

Query:  VIVNGKAPSAHQAVQASIYAQHKP
        V+VNGKAPS HQAV+ASIYAQHKP
Subjt:  VIVNGKAPSAHQAVQASIYAQHKP

A0A1S3BFP3 tetratricopeptide repeat protein 5-like isoform X31.2e-13966.59Show/hide
Query:  MCSEAMEDIFGKATAAVEELYHIRDTFFSVNPDDKTSKLRELSDLALKILDSIPP---------------------------------------------
        MCSEA ED F KATAAVEELY IRDTFF VNPDDKTSKLRELSDLALKILDSIPP                                             
Subjt:  MCSEAMEDIFGKATAAVEELYHIRDTFFSVNPDDKTSKLRELSDLALKILDSIPP---------------------------------------------

Query:  ------------------------------------------------GTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHSKL
                                                        GTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHSKL
Subjt:  ------------------------------------------------GTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHSKL

Query:  LQSLKAYQNA------------------VNKYLENYDRALSGFEAAALKDPSLGATREVHKMVNLLDKLDNMLK----AHAKTRRGASLPSSVDAVNSNF
        LQSLKAYQNA                  VNKYLENY RALSGFEAAALKDPSL ATREVHKMV LLDKLDNMLK    AHAK+R+GAS PSSVDA++SNF
Subjt:  LQSLKAYQNA------------------VNKYLENYDRALSGFEAAALKDPSLGATREVHKMVNLLDKLDNMLK----AHAKTRRGASLPSSVDAVNSNF

Query:  SYKRATVDQLSEGLNKTVAVTGKVLSFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTEKKMSSQVKEGDQITLPEPYYRNLDFSWKGKHYQFKSIRVD
        SYKR T+D LSEGLNKTVAVTGKVL FIKHDSLAPLYYL CDSNQTCFVLSLYGMRNDT       VKEGDQITL EPYYRNLDFSWKGKHYQF SIRVD
Subjt:  SYKRATVDQLSEGLNKTVAVTGKVLSFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTEKKMSSQVKEGDQITLPEPYYRNLDFSWKGKHYQFKSIRVD

Query:  FLEQVIVNGKAPSAHQAVQASIYAQHKP
        FLEQVIVNGKAPSAHQAV+ASIYAQHKP
Subjt:  FLEQVIVNGKAPSAHQAVQASIYAQHKP

A0A6J1DC38 tetratricopeptide repeat protein 5-like isoform X13.5e-13163.72Show/hide
Query:  MEDIFGKATAAVEELYHIRDTFFSVNPDDKTSKLRELSDLALKILDSIPP--------------------------------------------------
        MED F KATAA EELY IRDT+F VNPDDK SKLRELSDLA+KILDSIPP                                                  
Subjt:  MEDIFGKATAAVEELYHIRDTFFSVNPDDKTSKLRELSDLALKILDSIPP--------------------------------------------------

Query:  -------------------------------------------GTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHSKLLQSLK
                                                    TENEAKLVEESIQHA+EAVTLDVKDGNSWYNLGNACLTSFFVTGAWDH+KLLQSLK
Subjt:  -------------------------------------------GTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHSKLLQSLK

Query:  AYQNA------------------VNKYLENYDRALSGFEAAALKDPSLGATREVHKMVNLLDKLDNMLKAHAKTRRGASLPSSVDAVNSNFSYKRATVDQ
        AYQNA                  VNKYLENY+RALSGFEAAALKDPSL AT+EV KMVNLLDKL+NML+AHAKTRR  SL SSVD V+SN SYKRATVD 
Subjt:  AYQNA------------------VNKYLENYDRALSGFEAAALKDPSLGATREVHKMVNLLDKLDNMLKAHAKTRRGASLPSSVDAVNSNFSYKRATVDQ

Query:  LSEGLNKTVAVTGKVLSFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTEKKMSSQVKEGDQITLPEPYYRNLDFSWKGKHYQFKSIRVDFLEQVIVNG
        LSEGLNKTVAV GKVL FIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDT       VKEGDQITL EPYYRN DFSWKGKHY+FKSIRVDFLEQV++NG
Subjt:  LSEGLNKTVAVTGKVLSFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTEKKMSSQVKEGDQITLPEPYYRNLDFSWKGKHYQFKSIRVDFLEQVIVNG

Query:  KAPSAHQAVQASIYAQHKP
        KAP  HQAVQ SIYAQHKP
Subjt:  KAPSAHQAVQASIYAQHKP

A0A6J1H0J5 tetratricopeptide repeat protein 5-like7.5e-13464.39Show/hide
Query:  MCSEAMEDIFGKATAAVEELYHIRDTFFSVNPDDKTSKLRELSDLALKILDSIPP---------------------------------------------
        MCSE  E+ F KATAAVEELYHIRDTFF VN DDK SKLRELSDLA+KILDSI P                                             
Subjt:  MCSEAMEDIFGKATAAVEELYHIRDTFFSVNPDDKTSKLRELSDLALKILDSIPP---------------------------------------------

Query:  ------------------------------------------------GTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHSKL
                                                        GTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDH+KL
Subjt:  ------------------------------------------------GTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHSKL

Query:  LQSLKAYQNA------------------VNKYLENYDRALSGFEAAALKDPSLGATREVHKMVNLLDKLDNMLKAHAKTRRGASLPSSVDAVNSNFSYKR
        LQSLKAYQNA                  VNKYLENY+RALSGFEAAALKDPSL ATREVHKMVNLLDKLDNMLKAHAKTRR  S  SSVD V+SN SYKR
Subjt:  LQSLKAYQNA------------------VNKYLENYDRALSGFEAAALKDPSLGATREVHKMVNLLDKLDNMLKAHAKTRRGASLPSSVDAVNSNFSYKR

Query:  ATVDQLSEGLNKTVAVTGKVLSFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTEKKMSSQVKEGDQITLPEPYYRNLDFSWKGKHYQFKSIRVDFLEQ
        ATVD LSEGLNK+VAV GKVL FIKHDSLAPLYYL+CDSNQ CFV+SLYGMRNDT       VK GDQITL EPYYRN DFSWKGKHYQF SIRVDFLEQ
Subjt:  ATVDQLSEGLNKTVAVTGKVLSFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTEKKMSSQVKEGDQITLPEPYYRNLDFSWKGKHYQFKSIRVDFLEQ

Query:  VIVNGKAPSAHQAVQASIYAQHKP
        V+VNGKAPSAHQAVQ SIYAQHKP
Subjt:  VIVNGKAPSAHQAVQASIYAQHKP

A0A6J1IQB7 tetratricopeptide repeat protein 5-like1.4e-13564.86Show/hide
Query:  MCSEAMEDIFGKATAAVEELYHIRDTFFSVNPDDKTSKLRELSDLALKILDSIPP---------------------------------------------
        MCSE  E+ F KATAAVEELYHIRDTFF VNPDDK SKLRELSDLA+KILDSI P                                             
Subjt:  MCSEAMEDIFGKATAAVEELYHIRDTFFSVNPDDKTSKLRELSDLALKILDSIPP---------------------------------------------

Query:  ------------------------------------------------GTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHSKL
                                                        GTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDH+KL
Subjt:  ------------------------------------------------GTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHSKL

Query:  LQSLKAYQNA------------------VNKYLENYDRALSGFEAAALKDPSLGATREVHKMVNLLDKLDNMLKAHAKTRRGASLPSSVDAVNSNFSYKR
        LQSLKAYQNA                  VNKYLENY+RALSGFEAAALKDPSL ATREVHKMVNLLDKLDNMLKAHAKTRR  S  SSVD V+SN SYKR
Subjt:  LQSLKAYQNA------------------VNKYLENYDRALSGFEAAALKDPSLGATREVHKMVNLLDKLDNMLKAHAKTRRGASLPSSVDAVNSNFSYKR

Query:  ATVDQLSEGLNKTVAVTGKVLSFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTEKKMSSQVKEGDQITLPEPYYRNLDFSWKGKHYQFKSIRVDFLEQ
        ATVD LSEGLNK+VAV GKVL FIKHD LAPLYYLVCDSNQ CFV+SLYGMRNDT       VKEGDQITL EPYYRN DFSWKGKHYQF SIRVDFLEQ
Subjt:  ATVDQLSEGLNKTVAVTGKVLSFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTEKKMSSQVKEGDQITLPEPYYRNLDFSWKGKHYQFKSIRVDFLEQ

Query:  VIVNGKAPSAHQAVQASIYAQHKP
        V+VNGKAPSAHQAVQ SIYAQHKP
Subjt:  VIVNGKAPSAHQAVQASIYAQHKP

SwissProt top hitse value%identityAlignment
Q0P5H9 Tetratricopeptide repeat protein 52.6e-2227.72Show/hide
Query:  LSDLALKILDSIPPGTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHSKL-LQSLKAYQNA-------------------VNKY
        L +L++ +        +  ++ V +S++ AK AV +D+ DG SWY LGNA L+ +F TG   + K+  Q+L AY  A                   ++KY
Subjt:  LSDLALKILDSIPPGTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHSKL-LQSLKAYQNA-------------------VNKY

Query:  LENYDRALSGFEAAALKDPSLGAT-REVHKMVNLLDKLDNML--KAHAKTRRGASLPSSV--------------DAVNSNFSYKRATVDQLSEGLNKTVA
         ENY  AL GF  AA  DP+     +   ++++ L +L + L  K   KT++  S+  ++               A     + +R  ++ L  G+N    
Subjt:  LENYDRALSGFEAAALKDPSLGAT-REVHKMVNLLDKLDNML--KAHAKTRRGASLPSSV--------------DAVNSNFSYKRATVDQLSEGLNKTVA

Query:  VTGKVLSFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTEKKMSSQVKEGDQITLPEPYYRNLDFSWKGKHYQFKSIRVDFLEQVIVNGKAPSAHQAVQ
        V GKV+  +  +   P  + + DS+  C+ + +Y M        S  V  GD + +PEP  R      KGK Y F S+RV+    ++VNGK   +     
Subjt:  VTGKVLSFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTEKKMSSQVKEGDQITLPEPYYRNLDFSWKGKHYQFKSIRVDFLEQVIVNGKAPSAHQAVQ

Query:  ASI
        A++
Subjt:  ASI

Q5BK48 Tetratricopeptide repeat protein 56.8e-2328.05Show/hide
Query:  LSDLALKILDSIPPGTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHSKL-LQSLKAYQNA-------------------VNKY
        L +L++ +        +  ++ V +S++ AK AV +DV DG SWY LGNA L+ +F TG   + K+  Q+L AY  A                   ++KY
Subjt:  LSDLALKILDSIPPGTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHSKL-LQSLKAYQNA-------------------VNKY

Query:  LENYDRALSGFEAAALKDPSLGATRE-VHKMVNLLDKLDNMLKAHAKTR-----------RGASLPSSVD-----AVNSNFSYKRATVDQLSEGLNKTVA
         E+Y  AL GF  AA  DP+    ++   +++  L +L N+L +  KT+           R A L    D     A     + +   +  L  G+N    
Subjt:  LENYDRALSGFEAAALKDPSLGATRE-VHKMVNLLDKLDNMLKAHAKTR-----------RGASLPSSVD-----AVNSNFSYKRATVDQLSEGLNKTVA

Query:  VTGKVLSFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTEKKMSSQVKEGDQITLPEPYYRNLDFSWKGKHYQFKSIRVDFLEQVIVNGKAPSAHQAVQ
        V GKV+  +  +   P  + + DS+  C+ + +Y +        S  V  GD + +PEP  R+     KGK Y F S+RV+    ++VNGK  ++     
Subjt:  VTGKVLSFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTEKKMSSQVKEGDQITLPEPYYRNLDFSWKGKHYQFKSIRVDFLEQVIVNGKAPSAHQAVQ

Query:  ASI
        A++
Subjt:  ASI

Q8N0Z6 Tetratricopeptide repeat protein 51.2e-2230.27Show/hide
Query:  ILDSIPPGTENE-AKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHSKL-LQSLKAYQNA-------------------VNKYLENYDR
        +L  +   TE+E +  V +S++ AK AV +DV DG SWY LGN+ L+ +F TG   + K+  Q+L AY  A                   ++KY E+Y  
Subjt:  ILDSIPPGTENE-AKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHSKL-LQSLKAYQNA-------------------VNKYLENYDR

Query:  ALSGFEAAALKDPSLGATRE-VHKMVNLLDKLDNMLKAHAKTR-----------RGASLPSSVDAVNSNFSYKRATVD-----QLSEGLNKTVAVTGKVL
        AL GF  AA  DP+    R+   +++  LD+L ++L++  K +           R A L    D    + S ++ T++      L  G+N    + GKV+
Subjt:  ALSGFEAAALKDPSLGATRE-VHKMVNLLDKLDNMLKAHAKTR-----------RGASLPSSVDAVNSNFSYKRATVD-----QLSEGLNKTVAVTGKVL

Query:  SFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTEKKMSSQVKEGDQITLPEPYYRNLDFSWKGKHYQFKSIRVDFLEQVIVNGKAP-SAHQAV
          +  +   P  + + DS+  C+ + +Y +        S  V  GD + +PEP  R      KGK Y F S+RV+    ++VNGK   S+ QAV
Subjt:  SFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTEKKMSSQVKEGDQITLPEPYYRNLDFSWKGKHYQFKSIRVDFLEQVIVNGKAP-SAHQAV

Q99LG4 Tetratricopeptide repeat protein 51.5e-2228.05Show/hide
Query:  LSDLALKILDSIPPGTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHSKL-LQSLKAYQNA-------------------VNKY
        L +L++ +        +  ++ V +S++ AK AV +DV DG SWY LGNA L+ +F TG   + K+  Q+L AY  A                   ++KY
Subjt:  LSDLALKILDSIPPGTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHSKL-LQSLKAYQNA-------------------VNKY

Query:  LENYDRALSGFEAAALKDPSLGATRE-VHKMVNLLDKLDNMLKAHAKTR-----------RGASLPSSVDAVNSNFSYKRATVD-----QLSEGLNKTVA
         E+Y  AL GF  AA  DP     ++   +++  L +L ++L++  KT+           R A L    D    + S ++ T++      L  G+N    
Subjt:  LENYDRALSGFEAAALKDPSLGATRE-VHKMVNLLDKLDNMLKAHAKTR-----------RGASLPSSVDAVNSNFSYKRATVD-----QLSEGLNKTVA

Query:  VTGKVLSFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTEKKMSSQVKEGDQITLPEPYYRNLDFSWKGKHYQFKSIRVDFLEQVIVNGKAPSAHQAVQ
        V GKV+  +  +   P  + + DS+  C+ + +Y +        S  V  GD + +PEP  R+     KGK Y F S+RV+    ++VNGK  ++     
Subjt:  VTGKVLSFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTEKKMSSQVKEGDQITLPEPYYRNLDFSWKGKHYQFKSIRVDFLEQVIVNGKAPSAHQAVQ

Query:  ASI
        A++
Subjt:  ASI

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCGCTCGTCTCCCGTCGTTCCATTTCCACGGTCCGTCTTCTCGGCGGCGGAGACCATCCGACCACCGCAGAGCTCCGAGATGCCACGGCGGCGTCAGCGATGA
AGAGAACCAGAAGGACATCGTGGAAGCGAATTTGACGGTGTTGAGAGCGAGAATGGAGGATTTGAGGAAGAAGGAGCGGCGGATTCCGGTTCCGGCACGGCGCGAAGGAC
TCGAATTCGACAATGGCTGTAAGTATTTGTCGATGAGCGACGGCACGAAGTTCGATCGTGATTTTGATTGCAAGATTTTGAAGAATTTTGCCCTAATTTCAGAGTGTTTG
GAGGTGGTGACTACGGTTGGCGGTGCAGTTGGGCTTGTTTTTGTGGGTGGATCTTTAGGCATCTGTTTGGTTTCTCTTTTGCTTAACGATCTGCCAACACAGTATTTGCC
TGCCTCCCGTCTGGTGGTCTTTGCTCCGAGAATTGTCGCCGTCGGCCGATTGACGGAGCAGATGTGTAGCGAAGCCATGGAAGACATATTCGGAAAAGCCACAGCTGCGG
TCGAAGAGCTTTATCACATCAGAGACACTTTTTTTTCTGTAAATCCCGATGACAAAACTTCCAAATTACGGGAGCTATCGGATCTTGCTCTCAAGATCCTCGATTCCATT
CCTCCAGGTACTGAAAATGAGGCAAAACTTGTAGAGGAAAGTATTCAACATGCAAAAGAAGCAGTTACTTTGGATGTGAAGGATGGAAACTCTTGGTATAATCTAGGAAA
TGCATGCCTTACAAGTTTTTTTGTTACTGGAGCATGGGATCATAGTAAGCTTCTGCAATCTTTGAAGGCATATCAAAATGCGGTTAACAAATATCTGGAGAACTATGACA
GGGCCCTTAGTGGATTTGAGGCTGCTGCTTTGAAGGATCCTAGTCTTGGTGCTACTAGGGAGGTACACAAGATGGTGAATCTTCTTGACAAATTGGATAACATGTTGAAG
GCACATGCTAAAACACGAAGAGGTGCGTCTTTGCCATCATCAGTGGATGCTGTTAATTCGAACTTCTCATACAAGAGAGCCACTGTAGACCAGCTGTCAGAGGGTCTGAA
CAAAACAGTTGCAGTAACTGGGAAGGTGTTGTCCTTCATTAAGCATGATAGTCTTGCCCCACTATATTATTTGGTGTGTGATTCAAACCAAACATGCTTTGTTTTATCGT
TGTATGGTATGCGGAATGATACGGAAAAAAAAATGTCCTCACAGGTTAAGGAAGGAGATCAGATAACACTACCGGAACCGTATTATCGCAATCTTGATTTTTCTTGGAAG
GGAAAGCATTACCAGTTCAAATCAATCCGAGTCGATTTCTTAGAACAAGTTATTGTCAATGGAAAAGCTCCCTCTGCTCACCAGGCAGTCCAGGCATCAATATATGCCCA
ACACAAACCCTGA
mRNA sequenceShow/hide mRNA sequence
TTTTTTTTTATCATGTCTATTTTAATTCTTTGATTTTTCAATTTATTTTATTTTAATCCCTAAACTTTTTAAAATATTCCTTTTAGTCTTGAAGGAGCTAGGGTTTTCGT
TATTGGATTATATGGTCTCTTATTTGTCCGACGGTTGATCATTATCGTCACAGTAACCAAGTATTATAAATAGAAGCCTTTAGTTCGAATCAAAATCAACTTCCACACAC
ACAGCATGGTGCAAAATGGCTTCCGCTCGTCTCCCGTCGTTCCATTTCCACGGTCCGTCTTCTCGGCGGCGGAGACCATCCGACCACCGCAGAGCTCCGAGATGCCACGG
CGGCGTCAGCGATGAAGAGAACCAGAAGGACATCGTGGAAGCGAATTTGACGGTGTTGAGAGCGAGAATGGAGGATTTGAGGAAGAAGGAGCGGCGGATTCCGGTTCCGG
CACGGCGCGAAGGACTCGAATTCGACAATGGCTGTAAGTATTTGTCGATGAGCGACGGCACGAAGTTCGATCGTGATTTTGATTGCAAGATTTTGAAGAATTTTGCCCTA
ATTTCAGAGTGTTTGGAGGTGGTGACTACGGTTGGCGGTGCAGTTGGGCTTGTTTTTGTGGGTGGATCTTTAGGCATCTGTTTGGTTTCTCTTTTGCTTAACGATCTGCC
AACACAGTATTTGCCTGCCTCCCGTCTGGTGGTCTTTGCTCCGAGAATTGTCGCCGTCGGCCGATTGACGGAGCAGATGTGTAGCGAAGCCATGGAAGACATATTCGGAA
AAGCCACAGCTGCGGTCGAAGAGCTTTATCACATCAGAGACACTTTTTTTTCTGTAAATCCCGATGACAAAACTTCCAAATTACGGGAGCTATCGGATCTTGCTCTCAAG
ATCCTCGATTCCATTCCTCCAGGTACTGAAAATGAGGCAAAACTTGTAGAGGAAAGTATTCAACATGCAAAAGAAGCAGTTACTTTGGATGTGAAGGATGGAAACTCTTG
GTATAATCTAGGAAATGCATGCCTTACAAGTTTTTTTGTTACTGGAGCATGGGATCATAGTAAGCTTCTGCAATCTTTGAAGGCATATCAAAATGCGGTTAACAAATATC
TGGAGAACTATGACAGGGCCCTTAGTGGATTTGAGGCTGCTGCTTTGAAGGATCCTAGTCTTGGTGCTACTAGGGAGGTACACAAGATGGTGAATCTTCTTGACAAATTG
GATAACATGTTGAAGGCACATGCTAAAACACGAAGAGGTGCGTCTTTGCCATCATCAGTGGATGCTGTTAATTCGAACTTCTCATACAAGAGAGCCACTGTAGACCAGCT
GTCAGAGGGTCTGAACAAAACAGTTGCAGTAACTGGGAAGGTGTTGTCCTTCATTAAGCATGATAGTCTTGCCCCACTATATTATTTGGTGTGTGATTCAAACCAAACAT
GCTTTGTTTTATCGTTGTATGGTATGCGGAATGATACGGAAAAAAAAATGTCCTCACAGGTTAAGGAAGGAGATCAGATAACACTACCGGAACCGTATTATCGCAATCTT
GATTTTTCTTGGAAGGGAAAGCATTACCAGTTCAAATCAATCCGAGTCGATTTCTTAGAACAAGTTATTGTCAATGGAAAAGCTCCCTCTGCTCACCAGGCAGTCCAGGC
ATCAATATATGCCCAACACAAACCCTGAAAAGCTGTTGCAAATGGAATTTTTTAAAGCTGTTGGGGCTGTGTATTCCATGTCTTTGATGGTCATTCTGTGTGTTACCTGT
AAATAGATTTGGAATGTGAATGAAAGATGTGTGGAAATTTTGAACAATCAGCACCAAGAGGAATCAGGAGAAAGAATTTGCATAGGAGTTTTAAGTTTGCACTTTTTTGG
TTGTGAGTTGTAATTGCTGGGTGTTGTGCTTTCATTTGAATTTTTTTACTGAGTGATGTATTTATTATTGTTTTTTACCTCTACATATAACTTACACTCCTAGAATTGTA
AATTTACCACCTAAATGGTTTTGTATACAGTGCCAATCTTGCTAATGATCATCAACAGTTAATTTTATTGTACTCT
Protein sequenceShow/hide protein sequence
MASARLPSFHFHGPSSRRRRPSDHRRAPRCHGGVSDEENQKDIVEANLTVLRARMEDLRKKERRIPVPARREGLEFDNGCKYLSMSDGTKFDRDFDCKILKNFALISECL
EVVTTVGGAVGLVFVGGSLGICLVSLLLNDLPTQYLPASRLVVFAPRIVAVGRLTEQMCSEAMEDIFGKATAAVEELYHIRDTFFSVNPDDKTSKLRELSDLALKILDSI
PPGTENEAKLVEESIQHAKEAVTLDVKDGNSWYNLGNACLTSFFVTGAWDHSKLLQSLKAYQNAVNKYLENYDRALSGFEAAALKDPSLGATREVHKMVNLLDKLDNMLK
AHAKTRRGASLPSSVDAVNSNFSYKRATVDQLSEGLNKTVAVTGKVLSFIKHDSLAPLYYLVCDSNQTCFVLSLYGMRNDTEKKMSSQVKEGDQITLPEPYYRNLDFSWK
GKHYQFKSIRVDFLEQVIVNGKAPSAHQAVQASIYAQHKP