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Lsi04G002210 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G002210
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPB1 domain-containing protein
Genome locationchr04:2313360..2316156
RNA-Seq ExpressionLsi04G002210
SyntenyLsi04G002210
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF2317813.1 hypothetical protein GH714_041128 [Hevea brasiliensis]2.1e-0750.56Show/hide
Query:  ETWQTNGSRRIVTEATTFEQTLSVLLIDKLHNSRRPFSIPTARNPL--FVGSRPTHDKAVTLDLNCDKVVSCLTEDSAVTAHIFTVLSL
        ETW    S   V  A T     S LLI +LH+S    SIPTA+ PL  F        KAVTL LNC KVV+CLTEDS   A I T+LSL
Subjt:  ETWQTNGSRRIVTEATTFEQTLSVLLIDKLHNSRRPFSIPTARNPL--FVGSRPTHDKAVTLDLNCDKVVSCLTEDSAVTAHIFTVLSL
TrEMBL top hitse value%identityAlignment
A0A6A6N050 PB1 domain-containing protein1.0e-0750.56Show/hide
Query:  ETWQTNGSRRIVTEATTFEQTLSVLLIDKLHNSRRPFSIPTARNPL--FVGSRPTHDKAVTLDLNCDKVVSCLTEDSAVTAHIFTVLSL
        ETW    S   V  A T     S LLI +LH+S    SIPTA+ PL  F        KAVTL LNC KVV+CLTEDS   A I T+LSL
Subjt:  ETWQTNGSRRIVTEATTFEQTLSVLLIDKLHNSRRPFSIPTARNPL--FVGSRPTHDKAVTLDLNCDKVVSCLTEDSAVTAHIFTVLSL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGATGTATTCTAGCACTGAGCTGAAACCATTCGTTATGATGAAGAAGATGGATACCTTCTTCAGAGAGGACCACACAATCGTCTTGGATTCCTTTGAAGAAAGGAG
TACTAAGAATCCAATCAAAGTTGATTTTTTTAGCAAGATCTCATTTGAAGATTATGATTGGACTGAAGTCTTGCTTTTGGTGAGATTATCAGCTAATTCAGATTTTCTTC
AAGCAGTTGGCGAAATGATGCTGAAATCGAATCAAGGGGCTAATCGAATTTCAACTCAGATGTCCCATAAGCGACCAAGAACAAAGAATGGCACTTTTTGCAGGACATGT
TTGGACTTAGTTTCTTCTTTCCGATTGGCCAAGCCAACCTTCTTAGACAATGCTCTTAACACAATATCTTTGGCGACTGAAACATTTACCTCAAACACTCTAACACAGTG
GTCAGCGCCACAGGATGCAAGTTGCAGCTTCCTGCATTCTTCACCAATCTTCTCCGGTTCCTTCCATGCCAAACGGTTGACCGAGGAAACATGGCAAACAAATGGATCGA
GGCGTATAGTGACCGAAGCAACTACATTTGAGCAAACATTATCTGTTCTTTTGATAGACAAACTCCACAACTCAAGGAGGCCATTTTCCATTCCAACTGCAAGGAATCCA
TTGTTTGTGGGATCAAGACCGACCCACGATAAAGCGGTGACACTAGATTTGAACTGTGACAAAGTTGTTAGCTGCTTAACTGAAGATTCAGCTGTCACAGCCCATATCTT
CACAGTCTTATCTCTAGAGCCTGTTGCAAACTCA
mRNA sequenceShow/hide mRNA sequence
TGGCTTGCTTGAATCCTTCGGAAGGCTATGGCTCATGTTGATGTATTCTAGCACTGAGCTGAAACCATTCGTTATGATGAAGAAGATGGATACCTTCTTCAGAGAGGACC
ACACAATCGTCTTGGATTCCTTTGAAGAAAGGAGTACTAAGAATCCAATCAAAGTTGATTTTTTTAGCAAGATCTCATTTGAAGATTATGATTGGACTGAAGTCTTGCTT
TTGGTGAGATTATCAGCTAATTCAGATTTTCTTCAAGCAGTTGGCGAAATGATGCTGAAATCGAATCAAGGGGCTAATCGAATTTCAACTCAGATGTCCCATAAGCGACC
AAGAACAAAGAATGGCACTTTTTGCAGGACATGTTTGGACTTAGTTTCTTCTTTCCGATTGGCCAAGCCAACCTTCTTAGACAATGCTCTTAACACAATATCTTTGGCGA
CTGAAACATTTACCTCAAACACTCTAACACAGTGGTCAGCGCCACAGGATGCAAGTTGCAGCTTCCTGCATTCTTCACCAATCTTCTCCGGTTCCTTCCATGCCAAACGG
TTGACCGAGGAAACATGGCAAACAAATGGATCGAGGCGTATAGTGACCGAAGCAACTACATTTGAGCAAACATTATCTGTTCTTTTGATAGACAAACTCCACAACTCAAG
GAGGCCATTTTCCATTCCAACTGCAAGGAATCCATTGTTTGTGGGATCAAGACCGACCCACGATAAAGCGGTGACACTAGATTTGAACTGTGACAAAGTTGTTAGCTGCT
TAACTGAAGATTCAGCTGTCACAGCCCATATCTTCACAGTCTTATCTCTAGAGCCTGTTGCAAACTCA
Protein sequenceShow/hide protein sequence
MLMYSSTELKPFVMMKKMDTFFREDHTIVLDSFEERSTKNPIKVDFFSKISFEDYDWTEVLLLVRLSANSDFLQAVGEMMLKSNQGANRISTQMSHKRPRTKNGTFCRTC
LDLVSSFRLAKPTFLDNALNTISLATETFTSNTLTQWSAPQDASCSFLHSSPIFSGSFHAKRLTEETWQTNGSRRIVTEATTFEQTLSVLLIDKLHNSRRPFSIPTARNP
LFVGSRPTHDKAVTLDLNCDKVVSCLTEDSAVTAHIFTVLSLEPVANS