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Lsi04G002510 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G002510
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 43
Genome locationchr04:2578663..2578992
RNA-Seq ExpressionLsi04G002510
SyntenyLsi04G002510
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR040274 - CLAVATA3/ESR (CLE)-related protein 27/43


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573960.1 CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. sororia]1.8e-2468.87Show/hide
Query:  MFTRRIATSSSSAFAILILILWVSQIWV-CCRCQVRASRIF------PPPPHTADKSLASEEKDNAKNELLQKYFNGRAF-DRHRPDEGFEDSKRKIPSC
        M TRRIA SSS  FAILILILWVSQIWV CC  Q RASRIF      PPPPHT DK+    +  N + ELLQKYF  RAF D HR  EGF DSKRKIPSC
Subjt:  MFTRRIATSSSSAFAILILILWVSQIWV-CCRCQVRASRIF------PPPPHTADKSLASEEKDNAKNELLQKYFNGRAF-DRHRPDEGFEDSKRKIPSC

Query:  PDPLHN
        PDPLHN
Subjt:  PDPLHN

KAG6601288.1 CLAVATA3/ESR (CLE)-related protein 43, partial [Cucurbita argyrosperma subsp. sororia]2.4e-3773.68Show/hide
Query:  MWGFSSGRRQAMFTRRIATSSSSAFAILILILWVSQIWVCCRCQVRASRIF-PPPPHTADKSLASEEK----DNAKNELLQKYFNGRAFDRHRPDEGFED
        M G+SS RR AM TRRIATSSSS+FA+LI ILWVSQIWVC  CQ RASRIF PPPPHTAD +L  ++K     NA+ ELL+KYF G+AFDRHR DEGFED
Subjt:  MWGFSSGRRQAMFTRRIATSSSSAFAILILILWVSQIWVCCRCQVRASRIF-PPPPHTADKSLASEEK----DNAKNELLQKYFNGRAFDRHRPDEGFED

Query:  SKRKIPSCPDPLHN
        SKR+IPSCPDPLHN
Subjt:  SKRKIPSCPDPLHN

KAG7032076.1 CLAVATA3/ESR (CLE)-related protein 43, partial [Cucurbita argyrosperma subsp. argyrosperma]4.2e-3474.76Show/hide
Query:  MFTRRIATSSSSAFAILILILWVSQIWVCCRCQVRASRIF-PPPPHTADKSLASEEK----DNAKNELLQKYFNGRAFDRHRPDEGFEDSKRKIPSCPDP
        M TRRIATSSSS+FA+LI ILWVSQIWVC  CQ RASRIF PPPPHTAD +L  ++K     NA+ ELL+KYF G+AFDRHR DEGFEDSKR+IPSCPDP
Subjt:  MFTRRIATSSSSAFAILILILWVSQIWVCCRCQVRASRIF-PPPPHTADKSLASEEK----DNAKNELLQKYFNGRAFDRHRPDEGFEDSKRKIPSCPDP

Query:  LHN
        LHN
Subjt:  LHN

KGN52083.1 hypothetical protein Csa_008231 [Cucumis sativus]1.7e-4083.18Show/hide
Query:  MFTRRIATSSS----SAFAILILILWVSQIWVCCRCQVRASRIF-----PPPPHTADKSLASEEKDNAKNELLQKYFNGRAFDRHRPDEGFEDSKRKIPS
        MF RRI TSSS    SAFAILILILWVSQIWVCC CQ RASRIF     PPPPH ADKSL+ EEKDNAKN+LLQKYFNGRAFDRHR DEGFEDSKRKIPS
Subjt:  MFTRRIATSSS----SAFAILILILWVSQIWVCCRCQVRASRIF-----PPPPHTADKSLASEEKDNAKNELLQKYFNGRAFDRHRPDEGFEDSKRKIPS

Query:  CPDPLHN
        CPDPLHN
Subjt:  CPDPLHN

XP_022150497.1 uncharacterized protein LOC111018633 [Momordica charantia]1.4e-2165.31Show/hide
Query:  MFTRRIA--TSSSSAFAILILILWVSQIWVCCRCQVRASRIFPPPPHTADKSLASEEKDNA--KNELLQKYFNGRAFDRHRPDEGFEDSKRKIPSCPD
        M TRRIA  +SS+S+FAILILILWVSQIWVCC CQ RASRI PPP       L  + K +A  KNEL+QKY  GRA DRH   EGFEDSKR++PSC D
Subjt:  MFTRRIA--TSSSSAFAILILILWVSQIWVCCRCQVRASRIFPPPPHTADKSLASEEKDNA--KNELLQKYFNGRAFDRHRPDEGFEDSKRKIPSCPD

TrEMBL top hitse value%identityAlignment
A0A061E6F8 Clavata3/esr-related 43, putative6.7e-1442.59Show/hide
Query:  WGFSSGRRQAMFTRRIATSSSSAFAILILILWVSQIWVCCRCQVRASRIFPPPPHTADKSLASEEKDNAKNELLQKYFNGRAFDRHRPDEGFEDSKRKIP
        W FSS        R++  SS     +++LI++  QIWVCC C+  A RI P             + +  K +L QKYFNGR+F  ++ D GFE+SKR++P
Subjt:  WGFSSGRRQAMFTRRIATSSSSAFAILILILWVSQIWVCCRCQVRASRIFPPPPHTADKSLASEEKDNAKNELLQKYFNGRAFDRHRPDEGFEDSKRKIP

Query:  SCPDPLHN
        SCPDPLHN
Subjt:  SCPDPLHN

A0A0A0KR66 Uncharacterized protein8.4e-4183.18Show/hide
Query:  MFTRRIATSSS----SAFAILILILWVSQIWVCCRCQVRASRIF-----PPPPHTADKSLASEEKDNAKNELLQKYFNGRAFDRHRPDEGFEDSKRKIPS
        MF RRI TSSS    SAFAILILILWVSQIWVCC CQ RASRIF     PPPPH ADKSL+ EEKDNAKN+LLQKYFNGRAFDRHR DEGFEDSKRKIPS
Subjt:  MFTRRIATSSS----SAFAILILILWVSQIWVCCRCQVRASRIF-----PPPPHTADKSLASEEKDNAKNELLQKYFNGRAFDRHRPDEGFEDSKRKIPS

Query:  CPDPLHN
        CPDPLHN
Subjt:  CPDPLHN

A0A2C9UKL3 Uncharacterized protein1.0e-1439.45Show/hide
Query:  FSSGRRQAMFTRRIATSSSSAFAILILILWVSQIWVCCRCQVRASRIFPP---PPHTADKSLASEEKDNAKNELLQKYFNGRAFDRHRPDEGFEDSKRKI
        FSS RR  M+       SSS   +++ +++V QIWVC  C+  A RIFP     P+   +++++ +  ++K +L  K+FNGR +  +   +GFE++KR++
Subjt:  FSSGRRQAMFTRRIATSSSSAFAILILILWVSQIWVCCRCQVRASRIFPP---PPHTADKSLASEEKDNAKNELLQKYFNGRAFDRHRPDEGFEDSKRKI

Query:  PSCPDPLHN
        PSCPDPLHN
Subjt:  PSCPDPLHN

A0A2C9VNI0 Uncharacterized protein5.2e-1440.37Show/hide
Query:  FSSGRRQAMFTRRIATSSSSAFAILILILWVSQIWVCCRCQVRASRIFPP---PPHTADKSLASEEKDNAKNELLQKYFNGRAFDRHRPDEGFEDSKRKI
        F+S RR  M+       SSS  A+++ ++++ QIWVC  C+  A RIFP    P     +++ + +    K +LL+K+FNGRA   +   +GFE++KR++
Subjt:  FSSGRRQAMFTRRIATSSSSAFAILILILWVSQIWVCCRCQVRASRIFPP---PPHTADKSLASEEKDNAKNELLQKYFNGRAFDRHRPDEGFEDSKRKI

Query:  PSCPDPLHN
        PSCPDPLHN
Subjt:  PSCPDPLHN

A0A6J1DAV9 uncharacterized protein LOC1110186336.7e-2265.31Show/hide
Query:  MFTRRIA--TSSSSAFAILILILWVSQIWVCCRCQVRASRIFPPPPHTADKSLASEEKDNA--KNELLQKYFNGRAFDRHRPDEGFEDSKRKIPSCPD
        M TRRIA  +SS+S+FAILILILWVSQIWVCC CQ RASRI PPP       L  + K +A  KNEL+QKY  GRA DRH   EGFEDSKR++PSC D
Subjt:  MFTRRIA--TSSSSAFAILILILWVSQIWVCCRCQVRASRIFPPPPHTADKSLASEEKDNA--KNELLQKYFNGRAFDRHRPDEGFEDSKRKIPSCPD

SwissProt top hitse value%identityAlignment
Q6IWB1 CLAVATA3/ESR (CLE)-related protein 438.5e-0635.87Show/hide
Query:  FAILILILWVSQIWVCCRCQVRASRIFPPPPHT---ADKSLASEEKDNAKNE----LLQKYFNGRAFDRHRPDEGFEDSKRKIPSCPDPLHN
        F++ +L++ + QIW+      R  R  P         D++     K+  KNE    L Q+YF GR+F  +  +  FEDS R+IPS PD LHN
Subjt:  FAILILILWVSQIWVCCRCQVRASRIFPPPPHT---ADKSLASEEKDNAKNE----LLQKYFNGRAFDRHRPDEGFEDSKRKIPSCPDPLHN

Q9LUA1 CLAVATA3/ESR (CLE)-related protein 274.7e-0430.93Show/hide
Query:  RRIATSSSSAFAILILILWVSQIWVCCRCQVRASRIFPPPPHTADKSLASEEKDNAKNELLQKYFNGRAFD--RHRPDEGFEDSKRKIPSCPDPLHN
        R   +S ++   ++IL+ ++  ++ C   +V A RIFP  P +  +          + +L++KYF    F        +G  +SKR +PSCPDPLHN
Subjt:  RRIATSSSSAFAILILILWVSQIWVCCRCQVRASRIFPPPPHTADKSLASEEKDNAKNELLQKYFNGRAFD--RHRPDEGFEDSKRKIPSCPDPLHN

Arabidopsis top hitse value%identityAlignment
AT1G25425.1 CLAVATA3/ESR-RELATED 436.0e-0735.87Show/hide
Query:  FAILILILWVSQIWVCCRCQVRASRIFPPPPHT---ADKSLASEEKDNAKNE----LLQKYFNGRAFDRHRPDEGFEDSKRKIPSCPDPLHN
        F++ +L++ + QIW+      R  R  P         D++     K+  KNE    L Q+YF GR+F  +  +  FEDS R+IPS PD LHN
Subjt:  FAILILILWVSQIWVCCRCQVRASRIFPPPPHT---ADKSLASEEKDNAKNE----LLQKYFNGRAFDRHRPDEGFEDSKRKIPSCPDPLHN

AT3G25905.1 CLAVATA3/ESR-RELATED 273.3e-0530.93Show/hide
Query:  RRIATSSSSAFAILILILWVSQIWVCCRCQVRASRIFPPPPHTADKSLASEEKDNAKNELLQKYFNGRAFD--RHRPDEGFEDSKRKIPSCPDPLHN
        R   +S ++   ++IL+ ++  ++ C   +V A RIFP  P +  +          + +L++KYF    F        +G  +SKR +PSCPDPLHN
Subjt:  RRIATSSSSAFAILILILWVSQIWVCCRCQVRASRIFPPPPHTADKSLASEEKDNAKNELLQKYFNGRAFD--RHRPDEGFEDSKRKIPSCPDPLHN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGGTTTTTCTTCCGGCCGCCGGCAAGCCATGTTTACCAGAAGAATCGCCACTTCCTCCTCCTCTGCCTTTGCCATACTAATTTTGATCCTGTGGGTGTCACAGAT
TTGGGTTTGTTGTCGCTGCCAAGTTAGAGCTTCACGGATTTTTCCTCCGCCGCCGCACACGGCGGACAAATCACTTGCTAGCGAAGAAAAAGACAACGCCAAAAATGAAC
TTCTCCAAAAATACTTCAACGGCAGAGCCTTCGATCGCCACCGTCCCGATGAAGGATTCGAAGACAGCAAACGGAAAATACCCAGTTGTCCGGATCCTCTTCATAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGGGTTTTTCTTCCGGCCGCCGGCAAGCCATGTTTACCAGAAGAATCGCCACTTCCTCCTCCTCTGCCTTTGCCATACTAATTTTGATCCTGTGGGTGTCACAGAT
TTGGGTTTGTTGTCGCTGCCAAGTTAGAGCTTCACGGATTTTTCCTCCGCCGCCGCACACGGCGGACAAATCACTTGCTAGCGAAGAAAAAGACAACGCCAAAAATGAAC
TTCTCCAAAAATACTTCAACGGCAGAGCCTTCGATCGCCACCGTCCCGATGAAGGATTCGAAGACAGCAAACGGAAAATACCCAGTTGTCCGGATCCTCTTCATAATTAG
Protein sequenceShow/hide protein sequence
MWGFSSGRRQAMFTRRIATSSSSAFAILILILWVSQIWVCCRCQVRASRIFPPPPHTADKSLASEEKDNAKNELLQKYFNGRAFDRHRPDEGFEDSKRKIPSCPDPLHN