CuGenDBv2

Gene ID	Lsi04G002650
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Heavy metal-associated domain containing protein
Genome location	chr04:2733810..2735092
RNA-Seq Expression	Lsi04G002650
Synteny	Lsi04G002650
Gene Ontology terms	GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR036163 - Heavy metal-associated domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7013033.1 hypothetical protein SDJN02_25789 [Cucurbita argyrosperma subsp. argyrosperma]

8.3e-34

87.76

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Query:  RSMAAAGIGVRKQKIFPHASSLASIESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQIP-SRVSTIKRLFGSSCR
        ++ AAAGIGVRK KIFPHASSLASIESLSLPLVQEIV  ADI CAECQKKLANIL+KMNDTESVVVNLLDKKVILTR+LQIP SRVSTIKRL GSS R
Subjt:  RSMAAAGIGVRKQKIFPHASSLASIESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQIP-SRVSTIKRLFGSSCR

KGN52069.1 hypothetical protein Csa_009028 [Cucumis sativus]

7.5e-35

91.21

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Query:  GIGVRKQKIFPHASSLASIESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQIPSRVSTIKRLFGSSCR
        GIGVRK++IFPHASSLASIESL+LPLVQEIVLTADI CAECQKKLANILSKMNDTESVVVNLLDKKVILTRR QIPSRVSTI+RLF S CR
Subjt:  GIGVRKQKIFPHASSLASIESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQIPSRVSTIKRLFGSSCR

XP_022968296.1 uncharacterized protein LOC111467567 isoform X3 [Cucurbita maxima]

1.7e-34

91.58

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Query:  AAAGIGVRKQKIFPHASSLASIESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQIP-SRVSTIKRLFGSSCR
        AAAGIGVRK KIFPHASSLASIESLSLPLVQEIV TADI CAECQKKLANILSKMNDTESVVVNLLDKKVILTR+LQIP SRVST+KRL GSS R
Subjt:  AAAGIGVRKQKIFPHASSLASIESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQIP-SRVSTIKRLFGSSCR

XP_023542320.1 uncharacterized protein LOC111802252 [Cucurbita pepo subsp. pepo]

1.1e-33

90.53

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Query:  AAAGIGVRKQKIFPHASSLASIESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQIP-SRVSTIKRLFGSSCR
        AAAGIGVRK KIFPHASSLASIESLSLPLVQEIV  ADI CAECQKKLANIL+KMNDTESVVVNLLDKKVILTR+LQIP SRVSTIKRL GSS R
Subjt:  AAAGIGVRKQKIFPHASSLASIESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQIP-SRVSTIKRLFGSSCR

XP_038892707.1 uncharacterized protein LOC120081691 [Benincasa hispida]

9.5e-38

94.68

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Query:  AAAGIGVRKQKIFPHASSLASIESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQIPSRVSTIKRLFGSSCR
        AAAGIGVRK+KIFPHASSLASIESLSLPLVQEIVLTADI CAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQIPSR+STIKRL GS CR
Subjt:  AAAGIGVRKQKIFPHASSLASIESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQIPSRVSTIKRLFGSSCR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KT62 Uncharacterized protein

3.6e-35

91.21

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Query:  GIGVRKQKIFPHASSLASIESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQIPSRVSTIKRLFGSSCR
        GIGVRK++IFPHASSLASIESL+LPLVQEIVLTADI CAECQKKLANILSKMNDTESVVVNLLDKKVILTRR QIPSRVSTI+RLF S CR
Subjt:  GIGVRKQKIFPHASSLASIESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQIPSRVSTIKRLFGSSCR

A0A6J1DB71 uncharacterized protein LOC111018707

3.2e-31

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Query:  AAGIGVRKQKIFPHASSLASIESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQIP-------SRVSTIKRLFGSSCR
        AA IGVRK +IFPHASSLASIESLSLPLVQEIVLTADIRC ECQ KLANILSK+NDTESVVVNLL+KKVILTRRLQ+P       S+V+TIKRL GSS R
Subjt:  AAGIGVRKQKIFPHASSLASIESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQIP-------SRVSTIKRLFGSSCR

A0A6J1G176 uncharacterized protein LOC111449743 isoform X1

3.3e-28

69.17

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Query:  AAAGIGVRKQKIFPHASSLASIESLSLPL---------------------------VQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILT
        AAAGIGVRK KIFPHASSLAS+ESLSLPL                           VQEIV  ADI CAECQKKLANIL+KMNDTESVVVNLLDKKVILT
Subjt:  AAAGIGVRKQKIFPHASSLASIESLSLPL---------------------------VQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILT

Query:  RRLQI-PSRVSTIKRLFGSS
        R+LQI  SRVSTIKRL GSS
Subjt:  RRLQI-PSRVSTIKRLFGSS

A0A6J1G188 uncharacterized protein LOC111449743 isoform X3

1.3e-32

89.25

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Query:  AAAGIGVRKQKIFPHASSLASIESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQI-PSRVSTIKRLFGSS
        AAAGIGVRK KIFPHASSLAS+ESLSLPLVQEIV  ADI CAECQKKLANIL+KMNDTESVVVNLLDKKVILTR+LQI  SRVSTIKRL GSS
Subjt:  AAAGIGVRKQKIFPHASSLASIESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQI-PSRVSTIKRLFGSS

A0A6J1HUG9 uncharacterized protein LOC111467567 isoform X3

8.1e-35

91.58

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Query:  AAAGIGVRKQKIFPHASSLASIESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQIP-SRVSTIKRLFGSSCR
        AAAGIGVRK KIFPHASSLASIESLSLPLVQEIV TADI CAECQKKLANILSKMNDTESVVVNLLDKKVILTR+LQIP SRVST+KRL GSS R
Subjt:  AAAGIGVRKQKIFPHASSLASIESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQIP-SRVSTIKRLFGSSCR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G68585.1 unknown protein

4.6e-14

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Query:  SSLASIESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILT------RRLQ------IPSRVSTIKRL
        +SLAS+ SLS+PL+QEIVL+ADIRC++CQ+K+A+I+++M +T S++V++L+KKV LT      RR+       +  ++STIKRL
Subjt:  SSLASIESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILT------RRLQ------IPSRVSTIKRL

AT2G35730.1 Heavy metal transport/detoxification superfamily protein

1.5e-04

40.3

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Query:  SLASIESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQIPSRVST
        +L   E LSLP  Q I + AD+ C  CQ +++ I+SKM   E  VV+ L KK+++ R    P  VS+
Subjt:  SLASIESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQIPSRVST

Sequences

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CDS sequence

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ATGCGGAGCATGGCGGCGGCCGGAATCGGAGTTCGGAAGCAGAAGATTTTCCCTCATGCTTCTAGCCTGGCTTCCATTGAGTCCTTATCTCTGCCTCTTGTTCAGGAAAT
TGTATTAACAGCTGATATTCGGTGTGCTGAATGTCAGAAGAAACTGGCCAATATACTCTCCAAAATGAATGATACAGAGTCTGTGGTGGTGAATTTGTTGGACAAGAAAG
TGATATTGACTCGAAGATTGCAGATTCCATCCAGAGTTTCAACGATCAAGAGATTGTTTGGTTCTTCTTGCAGATAA

mRNA sequence

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Protein sequence

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MRSMAAAGIGVRKQKIFPHASSLASIESLSLPLVQEIVLTADIRCAECQKKLANILSKMNDTESVVVNLLDKKVILTRRLQIPSRVSTIKRLFGSSCR

Lsi04G002650 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome