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Lsi04G002770 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G002770
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein PLANT CADMIUM RESISTANCE 11
Genome locationchr04:2801086..2802602
RNA-Seq ExpressionLsi04G002770
SyntenyLsi04G002770
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013041.1 Protein PLANT CADMIUM RESISTANCE 2, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-2440.72Show/hide
Query:  ATFSSLPSAPPQPPPPP--------NFNHPRMAAPANFPQNPCEPKPHSPVAWSTG-----------CLTCWCPCITFGRIAEMVDRGST----------
        A FSSLPSAPP PPPPP        NF+HP MAAP ++P+NPCEP+PHS VAWS+G           CLTCWCPCITFG IAE+VDRGS           
Subjt:  ATFSSLPSAPPQPPPPP--------NFNHPRMAAPANFPQNPCEPKPHSPVAWSTG-----------CLTCWCPCITFGRIAEMVDRGST----------

Query:  -------------------------------------------------------------WWHGNVERQRRI----ANAAQPMPPSTVQGMIR
                                                                      WHGNVERQRRI    A A  P PP +VQGMIR
Subjt:  -------------------------------------------------------------WWHGNVERQRRI----ANAAQPMPPSTVQGMIR

XP_022968497.1 protein PLANT CADMIUM RESISTANCE 11 [Cucurbita maxima]6.9e-2340.1Show/hide
Query:  ATFSSLPSAPPQPPPPP--------NFNHPRMAAPANFPQNPCEPKPHSPVAWSTG-----------CLTCWCPCITFGRIAEMVDRGST----------
        A FSSLP APP PPP P        NF+HP MAAP ++P+NPC+P+PHS VAWS+G           CLTCWCPCITFG IAE+VDRGS           
Subjt:  ATFSSLPSAPPQPPPPP--------NFNHPRMAAPANFPQNPCEPKPHSPVAWSTG-----------CLTCWCPCITFGRIAEMVDRGST----------

Query:  -------------------------------------------------------------WWHGNVERQRRIA--NAAQPMPPSTVQGMIR
                                                                      WHGNVERQRRIA   AA P PP +VQGMIR
Subjt:  -------------------------------------------------------------WWHGNVERQRRIA--NAAQPMPPSTVQGMIR

XP_023542363.1 protein PLANT CADMIUM RESISTANCE 11 isoform X2 [Cucurbita pepo subsp. pepo]8.1e-2440.84Show/hide
Query:  ATFSSLPSAPPQPPPPP----NFNHPRMAAPANFPQNPCEPKPHSPVAWSTG-----------CLTCWCPCITFGRIAEMVDRGST--------------
        A FSS PSAPP PPPPP    NF+HP MAAP ++P+NPCEP+PHS VAWS+G           CLTCWCPCITFG IAE+VDRGS               
Subjt:  ATFSSLPSAPPQPPPPP----NFNHPRMAAPANFPQNPCEPKPHSPVAWSTG-----------CLTCWCPCITFGRIAEMVDRGST--------------

Query:  ---------------------------------------------------------WWHGNVERQRRIANAA-----QPMPPSTVQGMIR
                                                                  WHGNVERQRRIA  A      P PP +VQGMIR
Subjt:  ---------------------------------------------------------WWHGNVERQRRIANAA-----QPMPPSTVQGMIR

XP_031742182.1 protein PLANT CADMIUM RESISTANCE 11-like [Cucumis sativus]6.9e-2368.13Show/hide
Query:  DATFSSLPSAPPQPPP--------PPNFNHPRMAAPANFPQNPCEPKPHSPVAWSTG-----------CLTCWCPCITFGRIAEMVDRGST
        DATFSSLPSAP QPP         P +F H  MA PANFPQNPCEPKPHS V WSTG           CLTCWCPCITFGRIAEMVDRGST
Subjt:  DATFSSLPSAPPQPPP--------PPNFNHPRMAAPANFPQNPCEPKPHSPVAWSTG-----------CLTCWCPCITFGRIAEMVDRGST

XP_038891698.1 protein PLANT CADMIUM RESISTANCE 2-like [Benincasa hispida]4.0e-3147.34Show/hide
Query:  DATFSSLPSAPPQPPPP-----PNFNHPRMAAPANFPQNPCEPKPHSPVAWSTG-----------CLTCWCPCITFGRIAEMVDRGST------------
        DA FSSLPSAPPQPPPP      +FN P MAAPAN P NPCEPKPHS VAWSTG           CLTCWCPCITFGRIAE+VDRGST            
Subjt:  DATFSSLPSAPPQPPPP-----PNFNHPRMAAPANFPQNPCEPKPHSPVAWSTG-----------CLTCWCPCITFGRIAEMVDRGST------------

Query:  -----------------------------------------------------------WWHGNVERQRRIANAAQPMPPSTVQGMIR
                                                                    WHGNVERQRRIANAAQPMPP TV GMIR
Subjt:  -----------------------------------------------------------WWHGNVERQRRIANAAQPMPPSTVQGMIR

TrEMBL top hitse value%identityAlignment
A0A1S4DWV6 cell number regulator 2-like2.4e-2145.64Show/hide
Query:  MAAPA-NFPQNPCEPKPHSPVAWSTGCLTCWCPCITFGRIAEMVDRGST---------------------------------------------------
        MAAPA NFPQNPCEPKPHS +    GCLTCWCPCITFGRIAEMVDRGST                                                   
Subjt:  MAAPA-NFPQNPCEPKPHSPVAWSTGCLTCWCPCITFGRIAEMVDRGST---------------------------------------------------

Query:  --------------------WWHGNVERQRRIANAAQPMPPSTVQGMIR
                             WHGNVERQRRIANAAQPMPP  VQGMIR
Subjt:  --------------------WWHGNVERQRRIANAAQPMPPSTVQGMIR

A0A6I9T5S2 protein PLANT CADMIUM RESISTANCE 2-like1.0e-1155.06Show/hide
Query:  SSLPSAPPQPPPPPNFNHPRMAAPA--------NFPQNPCEPK--PHSPVAWSTG-----------CLTCWCPCITFGRIAEMVDRGST
        +SLPSAPP+P        P MAAPA        +FP     PK  PHSPV WSTG           CLTCWCPCITFGRIAE+VDRGST
Subjt:  SSLPSAPPQPPPPPNFNHPRMAAPA--------NFPQNPCEPK--PHSPVAWSTG-----------CLTCWCPCITFGRIAEMVDRGST

A0A6J1DBN6 protein PLANT CADMIUM RESISTANCE 111.6e-1739.13Show/hide
Query:  DATFSSLPSAPPQPPP-PPNFNHPRMAAPANFPQNPCEPKPHSPVAWSTG-----------CLTCWCPCITFGRIAEMVDRGST----------------
        DA FSS+PSAPP P     N NHPRMAA A  P     P PHSPVAWSTG           CLTCWCPCI+FGRIAE++DRGS                 
Subjt:  DATFSSLPSAPPQPPP-PPNFNHPRMAAPANFPQNPCEPKPHSPVAWSTG-----------CLTCWCPCITFGRIAEMVDRGST----------------

Query:  -W------------------------------------------------------WHGNVERQRRIANAAQPMPPSTVQGMIR
         W                                                      WHGNVERQRRIA A   +PP  VQGM R
Subjt:  -W------------------------------------------------------WHGNVERQRRIANAAQPMPPSTVQGMIR

A0A6J1G1Y5 protein PLANT CADMIUM RESISTANCE 111.3e-2264.04Show/hide
Query:  ATFSSLPSAPPQPPPPP--------NFNHPRMAAPANFPQNPCEPKPHSPVAWSTG-----------CLTCWCPCITFGRIAEMVDRGS
        A FSSLPSAPP PPPPP        NF+HP MAAP ++P+NPCEP+PHS VAWS+G           CLTCWCPCITFG IAE+VDRGS
Subjt:  ATFSSLPSAPPQPPPPP--------NFNHPRMAAPANFPQNPCEPKPHSPVAWSTG-----------CLTCWCPCITFGRIAEMVDRGS

A0A6J1HZT9 protein PLANT CADMIUM RESISTANCE 113.3e-2340.1Show/hide
Query:  ATFSSLPSAPPQPPPPP--------NFNHPRMAAPANFPQNPCEPKPHSPVAWSTG-----------CLTCWCPCITFGRIAEMVDRGST----------
        A FSSLP APP PPP P        NF+HP MAAP ++P+NPC+P+PHS VAWS+G           CLTCWCPCITFG IAE+VDRGS           
Subjt:  ATFSSLPSAPPQPPPPP--------NFNHPRMAAPANFPQNPCEPKPHSPVAWSTG-----------CLTCWCPCITFGRIAEMVDRGST----------

Query:  -------------------------------------------------------------WWHGNVERQRRIA--NAAQPMPPSTVQGMIR
                                                                      WHGNVERQRRIA   AA P PP +VQGMIR
Subjt:  -------------------------------------------------------------WWHGNVERQRRIA--NAAQPMPPSTVQGMIR

SwissProt top hitse value%identityAlignment
D9HP23 Cell number regulator 71.2e-0682.61Show/hide
Query:  CLTCWCPCITFGRIAEMVDRGST
        C+TCWCPC+TFGRIAE+VDRG+T
Subjt:  CLTCWCPCITFGRIAEMVDRGST

D9HP25 Cell number regulator 95.5e-0791.3Show/hide
Query:  CLTCWCPCITFGRIAEMVDRGST
        CLTCWCPCITFGRIAE+VDRG+T
Subjt:  CLTCWCPCITFGRIAEMVDRGST

D9HP26 Cell number regulator 107.9e-0644.29Show/hide
Query:  PPPPNFNHPRMAAP-ANFPQNPCEPKPHSPVAWSTG-----------CLTCWCPCITFGRIAEMVDRGST
        PP  + +    AAP   FP       P +   WS+G           CLTCWCPCITFGR+AE+VDRG+T
Subjt:  PPPPNFNHPRMAAP-ANFPQNPCEPKPHSPVAWSTG-----------CLTCWCPCITFGRIAEMVDRGST

Q9LQU4 Protein PLANT CADMIUM RESISTANCE 21.4e-0755.56Show/hide
Query:  KPHSPVAWSTG-----------CLTCWCPCITFGRIAEMVDRGST
        KPH+   WSTG           C+T WCPCITFG++AE+VDRGST
Subjt:  KPHSPVAWSTG-----------CLTCWCPCITFGRIAEMVDRGST

Q9SX24 Protein PLANT CADMIUM RESISTANCE 111.2e-0686.96Show/hide
Query:  CLTCWCPCITFGRIAEMVDRGST
        CLTCWCPC+ FGRIAE+VDRGST
Subjt:  CLTCWCPCITFGRIAEMVDRGST

Arabidopsis top hitse value%identityAlignment
AT1G14870.1 PLANT CADMIUM RESISTANCE 21.0e-0855.56Show/hide
Query:  KPHSPVAWSTG-----------CLTCWCPCITFGRIAEMVDRGST
        KPH+   WSTG           C+T WCPCITFG++AE+VDRGST
Subjt:  KPHSPVAWSTG-----------CLTCWCPCITFGRIAEMVDRGST

AT1G14880.1 PLANT CADMIUM RESISTANCE 19.6e-0752.27Show/hide
Query:  KPHSPVAWSTG-----------CLTCWCPCITFGRIAEMVDRGS
        KPH+   WSTG           C+T  CPCITFG++AE+VDRGS
Subjt:  KPHSPVAWSTG-----------CLTCWCPCITFGRIAEMVDRGS

AT1G68610.1 PLANT CADMIUM RESISTANCE 118.7e-0886.96Show/hide
Query:  CLTCWCPCITFGRIAEMVDRGST
        CLTCWCPC+ FGRIAE+VDRGST
Subjt:  CLTCWCPCITFGRIAEMVDRGST

AT3G18470.1 PLAC8 family protein1.4e-0568Show/hide
Query:  TGCLTCWCPCITFGRIAEMVDRGST
        T CLTC+CPC+TFGRIA++ D G T
Subjt:  TGCLTCWCPCITFGRIAEMVDRGST

AT5G35525.1 PLAC8 family protein4.8e-0644.68Show/hide
Query:  EPKPHSPVAWSTG-----------CLTCWCPCITFGRIAEMVDRGST
        +  PH+   WSTG           C+T  CPCITFG++A++VDRG+T
Subjt:  EPKPHSPVAWSTG-----------CLTCWCPCITFGRIAEMVDRGST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGCTACTTTCTCGTCTCTACCGTCGGCACCACCACAACCGCCACCTCCGCCGAATTTCAACCACCCCCGCATGGCGGCACCGGCCAATTTTCCCCAAAATCCCTG
TGAACCGAAACCCCACTCCCCAGTTGCTTGGTCCACTGGCTGTTTGACTTGCTGGTGCCCATGCATTACATTTGGCCGTATAGCTGAGATGGTGGATCGAGGGTCAACAT
GGTGGCATGGGAACGTGGAGAGGCAGAGACGGATTGCTAATGCTGCTCAACCGATGCCGCCGTCCACTGTGCAAGGAATGATTCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACGCTACTTTCTCGTCTCTACCGTCGGCACCACCACAACCGCCACCTCCGCCGAATTTCAACCACCCCCGCATGGCGGCACCGGCCAATTTTCCCCAAAATCCCTG
TGAACCGAAACCCCACTCCCCAGTTGCTTGGTCCACTGGCTGTTTGACTTGCTGGTGCCCATGCATTACATTTGGCCGTATAGCTGAGATGGTGGATCGAGGGTCAACAT
GGTGGCATGGGAACGTGGAGAGGCAGAGACGGATTGCTAATGCTGCTCAACCGATGCCGCCGTCCACTGTGCAAGGAATGATTCGTTAA
Protein sequenceShow/hide protein sequence
MDATFSSLPSAPPQPPPPPNFNHPRMAAPANFPQNPCEPKPHSPVAWSTGCLTCWCPCITFGRIAEMVDRGSTWWHGNVERQRRIANAAQPMPPSTVQGMIR