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Lsi04G002780 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G002780
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr04:2804258..2804590
RNA-Seq ExpressionLsi04G002780
SyntenyLsi04G002780
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034537.1 uncharacterized protein E6C27_scaffold65G005520 [Cucumis melo var. makuwa]1.3e-4382.57Show/hide
Query:  MDFKAELNTQVAEEEDSYYAEIRKQIILLLTAYDDEVEQLPKTAAKQGAEGRQRDRQPQPERNLSLCPNVNDFEEPVWHVNSWENGNGTGVFIPRAVKYK
        MDFKAELNTQ+ EEED YYAEIRKQIILLLTAYDD+ EQ P+TAAK GA+ +QRDR PQ + NLSLCPN  DFEEPVWHVNSWENGNGTGVFIP+AVKYK
Subjt:  MDFKAELNTQVAEEEDSYYAEIRKQIILLLTAYDDEVEQLPKTAAKQGAEGRQRDRQPQPERNLSLCPNVNDFEEPVWHVNSWENGNGTGVFIPRAVKYK

Query:  KYCVFSMFL
        KYCV SMFL
Subjt:  KYCVFSMFL

XP_008446569.1 PREDICTED: uncharacterized protein LOC103489264 [Cucumis melo]1.6e-4182.69Show/hide
Query:  MDFKAELNTQVAEEEDSYYAEIRKQIILLLTAYDDEVEQLPKTAAKQGAEGRQRDRQPQPERNLSLCPNVNDFEEPVWHVNSWENGNGTGVFIPRAVKYK
        MDFKAELNTQ+ EEED YYAEIRKQIILLLTAYDD+ EQ P+TAAK GA+ +QRDR PQ + NLSLCPN  DFEEPVWHVNSWENGNGTGVFIP+AVKYK
Subjt:  MDFKAELNTQVAEEEDSYYAEIRKQIILLLTAYDDEVEQLPKTAAKQGAEGRQRDRQPQPERNLSLCPNVNDFEEPVWHVNSWENGNGTGVFIPRAVKYK

Query:  KYCV
        KYCV
Subjt:  KYCV

XP_011655764.1 uncharacterized protein LOC105435583 [Cucumis sativus]1.7e-4385.98Show/hide
Query:  MDFKAELNTQVAEEEDSYYAEIRKQIILLLTAY--DDEVEQLPKTAAKQGAEGRQRDRQPQPERNLSLCPNVNDFEEPVWHVNSWENGNGTGVFIPRAVK
        MDFKAELNTQ+ EEED YYAEIRKQI LLLTAY  DDEVEQLPKTAAK GAE RQRD  PQ ERN+SLCPN NDF+EPVWHVNSWENGNGTGVFIP+AVK
Subjt:  MDFKAELNTQVAEEEDSYYAEIRKQIILLLTAY--DDEVEQLPKTAAKQGAEGRQRDRQPQPERNLSLCPNVNDFEEPVWHVNSWENGNGTGVFIPRAVK

Query:  YKKYCVF
        YKKYCVF
Subjt:  YKKYCVF

XP_023524582.1 uncharacterized protein LOC111788475 isoform X1 [Cucurbita pepo subsp. pepo]9.0e-3778.5Show/hide
Query:  MDFKAELNTQVAEEEDSYYAEIRKQIILLLTAY--DDEVEQLPKTAAKQGAEGRQRDRQPQPERNLSLCPNVNDFEEPVWHVNSWENGNGTGVFIPRAVK
        MDFKAELNTQVAEE+D YYAEIRKQIILLLTA   DD+VE+ PKTAAK+GAE   R R PQPERNLS C N ND E PVWHVNSWENGNGTGVFIP+AVK
Subjt:  MDFKAELNTQVAEEEDSYYAEIRKQIILLLTAY--DDEVEQLPKTAAKQGAEGRQRDRQPQPERNLSLCPNVNDFEEPVWHVNSWENGNGTGVFIPRAVK

Query:  YKKYCVF
        YK+Y +F
Subjt:  YKKYCVF

XP_023524590.1 uncharacterized protein LOC111788475 isoform X2 [Cucurbita pepo subsp. pepo]9.0e-3778.5Show/hide
Query:  MDFKAELNTQVAEEEDSYYAEIRKQIILLLTAY--DDEVEQLPKTAAKQGAEGRQRDRQPQPERNLSLCPNVNDFEEPVWHVNSWENGNGTGVFIPRAVK
        MDFKAELNTQVAEE+D YYAEIRKQIILLLTA   DD+VE+ PKTAAK+GAE   R R PQPERNLS C N ND E PVWHVNSWENGNGTGVFIP+AVK
Subjt:  MDFKAELNTQVAEEEDSYYAEIRKQIILLLTAY--DDEVEQLPKTAAKQGAEGRQRDRQPQPERNLSLCPNVNDFEEPVWHVNSWENGNGTGVFIPRAVK

Query:  YKKYCVF
        YK+Y +F
Subjt:  YKKYCVF

TrEMBL top hitse value%identityAlignment
A0A0A0KT55 Uncharacterized protein8.2e-4485.98Show/hide
Query:  MDFKAELNTQVAEEEDSYYAEIRKQIILLLTAY--DDEVEQLPKTAAKQGAEGRQRDRQPQPERNLSLCPNVNDFEEPVWHVNSWENGNGTGVFIPRAVK
        MDFKAELNTQ+ EEED YYAEIRKQI LLLTAY  DDEVEQLPKTAAK GAE RQRD  PQ ERN+SLCPN NDF+EPVWHVNSWENGNGTGVFIP+AVK
Subjt:  MDFKAELNTQVAEEEDSYYAEIRKQIILLLTAY--DDEVEQLPKTAAKQGAEGRQRDRQPQPERNLSLCPNVNDFEEPVWHVNSWENGNGTGVFIPRAVK

Query:  YKKYCVF
        YKKYCVF
Subjt:  YKKYCVF

A0A1S3BG13 uncharacterized protein LOC1034892647.7e-4282.69Show/hide
Query:  MDFKAELNTQVAEEEDSYYAEIRKQIILLLTAYDDEVEQLPKTAAKQGAEGRQRDRQPQPERNLSLCPNVNDFEEPVWHVNSWENGNGTGVFIPRAVKYK
        MDFKAELNTQ+ EEED YYAEIRKQIILLLTAYDD+ EQ P+TAAK GA+ +QRDR PQ + NLSLCPN  DFEEPVWHVNSWENGNGTGVFIP+AVKYK
Subjt:  MDFKAELNTQVAEEEDSYYAEIRKQIILLLTAYDDEVEQLPKTAAKQGAEGRQRDRQPQPERNLSLCPNVNDFEEPVWHVNSWENGNGTGVFIPRAVKYK

Query:  KYCV
        KYCV
Subjt:  KYCV

A0A5A7SZ32 Uncharacterized protein6.3e-4482.57Show/hide
Query:  MDFKAELNTQVAEEEDSYYAEIRKQIILLLTAYDDEVEQLPKTAAKQGAEGRQRDRQPQPERNLSLCPNVNDFEEPVWHVNSWENGNGTGVFIPRAVKYK
        MDFKAELNTQ+ EEED YYAEIRKQIILLLTAYDD+ EQ P+TAAK GA+ +QRDR PQ + NLSLCPN  DFEEPVWHVNSWENGNGTGVFIP+AVKYK
Subjt:  MDFKAELNTQVAEEEDSYYAEIRKQIILLLTAYDDEVEQLPKTAAKQGAEGRQRDRQPQPERNLSLCPNVNDFEEPVWHVNSWENGNGTGVFIPRAVKYK

Query:  KYCVFSMFL
        KYCV SMFL
Subjt:  KYCVFSMFL

A0A6J1H0R7 uncharacterized protein LOC1114588841.3e-3677.57Show/hide
Query:  MDFKAELNTQVAEEEDSYYAEIRKQIILLLTAYDD--EVEQLPKTAAKQGAEGRQRDRQPQPERNLSLCPNVNDFEEPVWHVNSWENGNGTGVFIPRAVK
        MDFKAELNTQVAEE+D YYAEIRKQIILLLT YDD  +VE+ PKTAAK+GAE   R R PQ ERNLS C N ND E PVWHVNSWENGNGTGVFIP+AVK
Subjt:  MDFKAELNTQVAEEEDSYYAEIRKQIILLLTAYDD--EVEQLPKTAAKQGAEGRQRDRQPQPERNLSLCPNVNDFEEPVWHVNSWENGNGTGVFIPRAVK

Query:  YKKYCVF
        YK+Y +F
Subjt:  YKKYCVF

A0A6J1JBG9 uncharacterized protein LOC1114852394.8e-3676.64Show/hide
Query:  MDFKAELNTQVAEEEDSYYAEIRKQIILLLTAYDD--EVEQLPKTAAKQGAEGRQRDRQPQPERNLSLCPNVNDFEEPVWHVNSWENGNGTGVFIPRAVK
        MDFKAELNTQVAEE+DSYYAEIRKQIILLLT YDD  +VE+ PKTAAK+GAE   R   PQ ERNLS C N ND EEPVWHVNSWENGNGTGVFIP+AV+
Subjt:  MDFKAELNTQVAEEEDSYYAEIRKQIILLLTAYDD--EVEQLPKTAAKQGAEGRQRDRQPQPERNLSLCPNVNDFEEPVWHVNSWENGNGTGVFIPRAVK

Query:  YKKYCVF
        +K+Y +F
Subjt:  YKKYCVF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTCAAAGCAGAGCTCAACACACAAGTAGCAGAAGAAGAAGATAGTTACTATGCTGAGATTAGGAAGCAGATCATTCTACTTTTGACAGCATACGATGACGAGGT
CGAACAACTTCCCAAAACTGCAGCCAAACAAGGCGCAGAAGGTCGACAAAGAGATCGCCAGCCACAGCCAGAGAGAAATTTGAGTTTGTGTCCAAATGTGAATGATTTTG
AAGAACCTGTTTGGCATGTAAATTCATGGGAGAATGGGAATGGAACAGGAGTTTTCATCCCTCGAGCAGTCAAATACAAAAAATATTGTGTTTTCAGTATGTTCCTGTCT
TGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTCAAAGCAGAGCTCAACACACAAGTAGCAGAAGAAGAAGATAGTTACTATGCTGAGATTAGGAAGCAGATCATTCTACTTTTGACAGCATACGATGACGAGGT
CGAACAACTTCCCAAAACTGCAGCCAAACAAGGCGCAGAAGGTCGACAAAGAGATCGCCAGCCACAGCCAGAGAGAAATTTGAGTTTGTGTCCAAATGTGAATGATTTTG
AAGAACCTGTTTGGCATGTAAATTCATGGGAGAATGGGAATGGAACAGGAGTTTTCATCCCTCGAGCAGTCAAATACAAAAAATATTGTGTTTTCAGTATGTTCCTGTCT
TGA
Protein sequenceShow/hide protein sequence
MDFKAELNTQVAEEEDSYYAEIRKQIILLLTAYDDEVEQLPKTAAKQGAEGRQRDRQPQPERNLSLCPNVNDFEEPVWHVNSWENGNGTGVFIPRAVKYKKYCVFSMFLS