CuGenDBv2

Gene ID	Lsi04G002900
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	SUPPRESSOR OF GAMMA RESPONSE 1
Genome location	chr04:2929765..2931052
RNA-Seq Expression	Lsi04G002900
Synteny	Lsi04G002900
Gene Ontology terms	GO:0000077 - DNA damage checkpoint (biological process) GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0010332 - response to gamma radiation (biological process) GO:0040020 - regulation of meiotic nuclear division (biological process) GO:0005634 - nucleus (cellular component) GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function) GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domains	IPR044799 - NAC domain-containing protein SOG1-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0034527.1 NAC domain-containing protein 8 [Cucumis melo var. makuwa]

5.6e-69

88.74

Show/hide

Query:  IFNESAYYQVPPEFEKSDKHDMIKPDGCSDEVIDDNDNDIEEEPKWWEGESQNILDSQQLVEALSLCDDLLQSQSPPRDGNSNHGASSSKSCFAEYAKLG
        I + S   +VPPEFEKS+KH++IKPDG S+EVIDDNDN IEEEPKWWEGESQNILDSQQLVEALSLCDDLLQSQSPPRD N NHGAS SKSCF+EYAKLG
Subjt:  IFNESAYYQVPPEFEKSDKHDMIKPDGCSDEVIDDNDNDIEEEPKWWEGESQNILDSQQLVEALSLCDDLLQSQSPPRDGNSNHGASSSKSCFAEYAKLG

Query:  PEDLKKDLEECQNLVLDPANIELDTPPEFRLSQLDFGSQESFLAWGGKAAE
        PEDLKKDLEECQNLVLDPANIELDTPPEFRLSQLDFGSQESFLAWGGKAAE
Subjt:  PEDLKKDLEECQNLVLDPANIELDTPPEFRLSQLDFGSQESFLAWGGKAAE

XP_008446555.1 PREDICTED: NAC domain-containing protein 8 [Cucumis melo]

5.6e-69

88.74

Show/hide

Query:  IFNESAYYQVPPEFEKSDKHDMIKPDGCSDEVIDDNDNDIEEEPKWWEGESQNILDSQQLVEALSLCDDLLQSQSPPRDGNSNHGASSSKSCFAEYAKLG
        I + S   +VPPEFEKS+KH++IKPDG S+EVIDDNDN IEEEPKWWEGESQNILDSQQLVEALSLCDDLLQSQSPPRD N NHGAS SKSCF+EYAKLG
Subjt:  IFNESAYYQVPPEFEKSDKHDMIKPDGCSDEVIDDNDNDIEEEPKWWEGESQNILDSQQLVEALSLCDDLLQSQSPPRDGNSNHGASSSKSCFAEYAKLG

Query:  PEDLKKDLEECQNLVLDPANIELDTPPEFRLSQLDFGSQESFLAWGGKAAE
        PEDLKKDLEECQNLVLDPANIELDTPPEFRLSQLDFGSQESFLAWGGKAAE
Subjt:  PEDLKKDLEECQNLVLDPANIELDTPPEFRLSQLDFGSQESFLAWGGKAAE

XP_011655759.1 SUPPRESSOR OF GAMMA RESPONSE 1 [Cucumis sativus]

1.6e-68

89.4

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Query:  IFNESAYYQVPPEFEKSDKHDMIKPDGCSDEVIDDNDNDIEEEPKWWEGESQNILDSQQLVEALSLCDDLLQSQSPPRDGNSNHGASSSKSCFAEYAKLG
        I + S   +VPPEFEKS+ +DMIKPDG SDEVIDDNDN IEEEPKWWEGESQNILDSQQLVEALSLCDDLLQSQSPPRDGN NHGAS SKSCF+EYAKLG
Subjt:  IFNESAYYQVPPEFEKSDKHDMIKPDGCSDEVIDDNDNDIEEEPKWWEGESQNILDSQQLVEALSLCDDLLQSQSPPRDGNSNHGASSSKSCFAEYAKLG

Query:  PEDLKKDLEECQNLVLDPANIELDTPPEFRLSQLDFGSQESFLAWGGKAAE
        PEDLKKDLEECQNLVLDPANIELDTPPEFRLSQLDFGSQESFLAWGGK AE
Subjt:  PEDLKKDLEECQNLVLDPANIELDTPPEFRLSQLDFGSQESFLAWGGKAAE

XP_022150639.1 SUPPRESSOR OF GAMMA RESPONSE 1 [Momordica charantia]

5.8e-66

84.77

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Query:  IFNESAYYQVPPEFEKSDKHDMIKPDGCSDEVIDDNDNDIEEEPKWWEGESQNILDSQQLVEALSLCDDLLQSQSPPRDGNSNHGASSSKSCFAEYAKLG
        I + S   QVPPEFEK D  D++K DGCSDEVIDDN+N +EEEPKWWEGESQNILDSQQLVEALSLCDDLLQSQSPPR+GNS +GAS SKSC +EYAKLG
Subjt:  IFNESAYYQVPPEFEKSDKHDMIKPDGCSDEVIDDNDNDIEEEPKWWEGESQNILDSQQLVEALSLCDDLLQSQSPPRDGNSNHGASSSKSCFAEYAKLG

Query:  PEDLKKDLEECQNLVLDPANIELDTPPEFRLSQLDFGSQESFLAWGGKAAE
        PEDLKKDLEECQNLVLDPANIELDTPPEFRLSQLDFGSQESFLAWGGK  E
Subjt:  PEDLKKDLEECQNLVLDPANIELDTPPEFRLSQLDFGSQESFLAWGGKAAE

XP_038892786.1 SUPPRESSOR OF GAMMA RESPONSE 1 [Benincasa hispida]

3.3e-69

88.74

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Query:  IFNESAYYQVPPEFEKSDKHDMIKPDGCSDEVIDDNDNDIEEEPKWWEGESQNILDSQQLVEALSLCDDLLQSQSPPRDGNSNHGASSSKSCFAEYAKLG
        I + SA  +VPPEFE SDK+ MIKPDGCS EVIDDNDN IEEEPKWWEGESQNILDSQQLVEALSLCDDLLQSQSP RDGNSNHG S SKSCF+EYAKLG
Subjt:  IFNESAYYQVPPEFEKSDKHDMIKPDGCSDEVIDDNDNDIEEEPKWWEGESQNILDSQQLVEALSLCDDLLQSQSPPRDGNSNHGASSSKSCFAEYAKLG

Query:  PEDLKKDLEECQNLVLDPANIELDTPPEFRLSQLDFGSQESFLAWGGKAAE
        PEDLKKDLEECQNLVLDP+NI+LDTPPEFRLSQLDFGSQESFLAWGGKAAE
Subjt:  PEDLKKDLEECQNLVLDPANIELDTPPEFRLSQLDFGSQESFLAWGGKAAE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KUF3 NAC domain-containing protein

8.0e-69

89.4

Show/hide

Query:  IFNESAYYQVPPEFEKSDKHDMIKPDGCSDEVIDDNDNDIEEEPKWWEGESQNILDSQQLVEALSLCDDLLQSQSPPRDGNSNHGASSSKSCFAEYAKLG
        I + S   +VPPEFEKS+ +DMIKPDG SDEVIDDNDN IEEEPKWWEGESQNILDSQQLVEALSLCDDLLQSQSPPRDGN NHGAS SKSCF+EYAKLG
Subjt:  IFNESAYYQVPPEFEKSDKHDMIKPDGCSDEVIDDNDNDIEEEPKWWEGESQNILDSQQLVEALSLCDDLLQSQSPPRDGNSNHGASSSKSCFAEYAKLG

Query:  PEDLKKDLEECQNLVLDPANIELDTPPEFRLSQLDFGSQESFLAWGGKAAE
        PEDLKKDLEECQNLVLDPANIELDTPPEFRLSQLDFGSQESFLAWGGK AE
Subjt:  PEDLKKDLEECQNLVLDPANIELDTPPEFRLSQLDFGSQESFLAWGGKAAE

A0A0S2IA76 NAC domain-containing protein

2.8e-66

84.77

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Query:  IFNESAYYQVPPEFEKSDKHDMIKPDGCSDEVIDDNDNDIEEEPKWWEGESQNILDSQQLVEALSLCDDLLQSQSPPRDGNSNHGASSSKSCFAEYAKLG
        I + S   QVPPEFEK D  D++K DGCSDEVIDDN+N +EEEPKWWEGESQNILDSQQLVEALSLCDDLLQSQSPPR+GNS +GAS SKSC +EYAKLG
Subjt:  IFNESAYYQVPPEFEKSDKHDMIKPDGCSDEVIDDNDNDIEEEPKWWEGESQNILDSQQLVEALSLCDDLLQSQSPPRDGNSNHGASSSKSCFAEYAKLG

Query:  PEDLKKDLEECQNLVLDPANIELDTPPEFRLSQLDFGSQESFLAWGGKAAE
        PEDLKKDLEECQNLVLDPANIELDTPPEFRLSQLDFGSQESFLAWGGK  E
Subjt:  PEDLKKDLEECQNLVLDPANIELDTPPEFRLSQLDFGSQESFLAWGGKAAE

A0A1S3BEU2 NAC domain-containing protein 8

2.7e-69

88.74

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Query:  IFNESAYYQVPPEFEKSDKHDMIKPDGCSDEVIDDNDNDIEEEPKWWEGESQNILDSQQLVEALSLCDDLLQSQSPPRDGNSNHGASSSKSCFAEYAKLG
        I + S   +VPPEFEKS+KH++IKPDG S+EVIDDNDN IEEEPKWWEGESQNILDSQQLVEALSLCDDLLQSQSPPRD N NHGAS SKSCF+EYAKLG
Subjt:  IFNESAYYQVPPEFEKSDKHDMIKPDGCSDEVIDDNDNDIEEEPKWWEGESQNILDSQQLVEALSLCDDLLQSQSPPRDGNSNHGASSSKSCFAEYAKLG

Query:  PEDLKKDLEECQNLVLDPANIELDTPPEFRLSQLDFGSQESFLAWGGKAAE
        PEDLKKDLEECQNLVLDPANIELDTPPEFRLSQLDFGSQESFLAWGGKAAE
Subjt:  PEDLKKDLEECQNLVLDPANIELDTPPEFRLSQLDFGSQESFLAWGGKAAE

A0A5D3CB49 NAC domain-containing protein 8

2.7e-69

88.74

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Query:  IFNESAYYQVPPEFEKSDKHDMIKPDGCSDEVIDDNDNDIEEEPKWWEGESQNILDSQQLVEALSLCDDLLQSQSPPRDGNSNHGASSSKSCFAEYAKLG
        I + S   +VPPEFEKS+KH++IKPDG S+EVIDDNDN IEEEPKWWEGESQNILDSQQLVEALSLCDDLLQSQSPPRD N NHGAS SKSCF+EYAKLG
Subjt:  IFNESAYYQVPPEFEKSDKHDMIKPDGCSDEVIDDNDNDIEEEPKWWEGESQNILDSQQLVEALSLCDDLLQSQSPPRDGNSNHGASSSKSCFAEYAKLG

Query:  PEDLKKDLEECQNLVLDPANIELDTPPEFRLSQLDFGSQESFLAWGGKAAE
        PEDLKKDLEECQNLVLDPANIELDTPPEFRLSQLDFGSQESFLAWGGKAAE
Subjt:  PEDLKKDLEECQNLVLDPANIELDTPPEFRLSQLDFGSQESFLAWGGKAAE

A0A6J1DAP1 SUPPRESSOR OF GAMMA RESPONSE 1

2.8e-66

84.77

Show/hide

Query:  IFNESAYYQVPPEFEKSDKHDMIKPDGCSDEVIDDNDNDIEEEPKWWEGESQNILDSQQLVEALSLCDDLLQSQSPPRDGNSNHGASSSKSCFAEYAKLG
        I + S   QVPPEFEK D  D++K DGCSDEVIDDN+N +EEEPKWWEGESQNILDSQQLVEALSLCDDLLQSQSPPR+GNS +GAS SKSC +EYAKLG
Subjt:  IFNESAYYQVPPEFEKSDKHDMIKPDGCSDEVIDDNDNDIEEEPKWWEGESQNILDSQQLVEALSLCDDLLQSQSPPRDGNSNHGASSSKSCFAEYAKLG

Query:  PEDLKKDLEECQNLVLDPANIELDTPPEFRLSQLDFGSQESFLAWGGKAAE
        PEDLKKDLEECQNLVLDPANIELDTPPEFRLSQLDFGSQESFLAWGGK  E
Subjt:  PEDLKKDLEECQNLVLDPANIELDTPPEFRLSQLDFGSQESFLAWGGKAAE

SwissProt top hits

e value

%identity

Alignment

Q6NQK2 SUPPRESSOR OF GAMMA RESPONSE 1

3.8e-36

69.03

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Query:  DNDNDIEEEPKWWEGESQNILDSQQLVEALSLCDDLLQSQSPPRDGNSNHGASSSKS-CFAEYAKLGPEDLKKDLEECQNLVLDPANIELDTPPEFRLSQ
        DN+N  EE+P W++  SQ IL+SQQLVEALSLCDDLL SQ   R+ N+N G+   K  C A+YA LGPED K+DLEECQ +VLDP+NIELDTPPEFRLSQ
Subjt:  DNDNDIEEEPKWWEGESQNILDSQQLVEALSLCDDLLQSQSPPRDGNSNHGASSSKS-CFAEYAKLGPEDLKKDLEECQNLVLDPANIELDTPPEFRLSQ

Query:  LDFGSQESFLAWG
        L+FGSQ+SFLAWG
Subjt:  LDFGSQESFLAWG

Arabidopsis top hits

e value

%identity

Alignment

AT1G25580.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein

2.7e-37

69.03

Show/hide

Query:  DNDNDIEEEPKWWEGESQNILDSQQLVEALSLCDDLLQSQSPPRDGNSNHGASSSKS-CFAEYAKLGPEDLKKDLEECQNLVLDPANIELDTPPEFRLSQ
        DN+N  EE+P W++  SQ IL+SQQLVEALSLCDDLL SQ   R+ N+N G+   K  C A+YA LGPED K+DLEECQ +VLDP+NIELDTPPEFRLSQ
Subjt:  DNDNDIEEEPKWWEGESQNILDSQQLVEALSLCDDLLQSQSPPRDGNSNHGASSSKS-CFAEYAKLGPEDLKKDLEECQNLVLDPANIELDTPPEFRLSQ

Query:  LDFGSQESFLAWG
        L+FGSQ+SFLAWG
Subjt:  LDFGSQESFLAWG

Sequences

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CDS sequence

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mRNA sequence

Show/hide mRNA sequence

ATGGCCTTTAATAAAACTACTATTTTTCCATTTAAAGGTTTCAATTCCACTTGGTTGCTGGAAACAACTAATTTTACTCAAGTCTGGCACCCATTGAAAAAGGATGTCAC
CTATTGTTCCAATCGTTATGTTGTTATGCATAATCTGTTCTCTATTTTTAATGAGTCTGCTTATTATCAGGTTCCACCTGAATTTGAGAAGTCAGACAAACACGATATGA
TTAAGCCAGATGGTTGCTCTGATGAAGTGATTGACGATAATGACAATGACATCGAGGAAGAACCGAAATGGTGGGAAGGAGAGTCACAGAACATATTGGACTCCCAACAA
CTTGTGGAAGCATTGTCTCTCTGTGATGATCTCCTTCAGAGCCAGTCTCCCCCTAGGGATGGGAATTCTAACCACGGCGCATCGAGCAGCAAGTCTTGCTTTGCTGAATA
TGCAAAATTAGGACCAGAGGATCTTAAGAAGGATCTGGAAGAGTGCCAAAATCTTGTCCTTGATCCTGCAAACATCGAACTCGACACACCTCCAGAGTTCCGACTTAGCC
AACTTGATTTCGGTTCGCAAGAAAGCTTCTTGGCTTGGGGTGGTAAGGCAGCAGAGTAAATACTGTGGTGCCCTACCTGCAACCTTTTTGATTTTGTACCGTCAAAAAAG
TCCCATCCTATCAATGCAATTCCCAACAAAACTTCCCCTTGTAAACTTGTTTTTAAAATTTCAACGACTTCTTTGAACTCTTGTAACAGAGTGAAAACAGAGAAGTAACC
CAGTGTTGAATTTGTTATCGGACATTGAAAGGAGCAAGACATTTGTAAAGAAAAGTAAACTATGTGGGGGTATTTGGGGGTGTTGAATTAGTTATTATAGTCAGTAATTA
TTATTGTAGTAAGTGGGTTATAATAGTCTATAGGTTATAAGGGGGTGTTTGGCCTCCCAACTTGAAGTTAGTGGAGTGGGTTATTATAATCCACTGAATGTTTGGAGTTT
CAAATATAATAGTAGTGTTTACAACTATTTATAACCTACAATTATCTATTGTAATACTATATGAAATATCTCTTTGTCA

Protein sequence

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MAFNKTTIFPFKGFNSTWLLETTNFTQVWHPLKKDVTYCSNRYVVMHNLFSIFNESAYYQVPPEFEKSDKHDMIKPDGCSDEVIDDNDNDIEEEPKWWEGESQNILDSQQ
LVEALSLCDDLLQSQSPPRDGNSNHGASSSKSCFAEYAKLGPEDLKKDLEECQNLVLDPANIELDTPPEFRLSQLDFGSQESFLAWGGKAAE

Lsi04G002900 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome