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Lsi04G003000 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G003000
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPiriformospora indica-insensitive protein 2-like
Genome locationchr04:3034259..3034579
RNA-Seq ExpressionLsi04G003000
SyntenyLsi04G003000
Gene Ontology termsGO:0010227 - floral organ abscission (biological process)
GO:0005615 - extracellular space (cellular component)
InterPro domainsIPR039639 - Protein IDA-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034518.1 putative Membrane lipoprotein [Cucumis melo var. makuwa]6.7e-2978.3Show/hide
Query:  MPSSSSSSSSSSSSSSSFQCKRNPIAIFIFLLLLLLLLSGFSSATRPGKTMEHHGNNPDMSNSYFNYMTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVV
        MPSSSSSSSSSSSSSSSFQ K+N I IFI   LLLLLLSGFSSATRPG TME     PDMSNS +   T FRY GQTF FLP+GVPIPPSGPSDRHNSVV
Subjt:  MPSSSSSSSSSSSSSSSFQCKRNPIAIFIFLLLLLLLLSGFSSATRPGKTMEHHGNNPDMSNSYFNYMTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVV

Query:  DSVPPN
        DS+PPN
Subjt:  DSVPPN
KAG6601330.1 Protein IDA, partial [Cucurbita argyrosperma subsp. sororia]1.0e-2473.79Show/hide
Query:  SSSSSSSSSSSSSSFQCKRNPIAIFIFLLLLLLLLSGFSSATRPGKTMEHHGNNPDMSNSYFNYMTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDSV
        SSSSSSSSSSSSSS        AIF+   LLLLL+SGF SATRPGKTM H    PD+SN  FNY TGFRYVGQTFS+LPRGVPIPPSGPSDRHNS+VDS+
Subjt:  SSSSSSSSSSSSSSFQCKRNPIAIFIFLLLLLLLLSGFSSATRPGKTMEHHGNNPDMSNSYFNYMTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDSV

Query:  PPN
        PP+
Subjt:  PPN
KAG7032113.1 Protein IDA, partial [Cucurbita argyrosperma subsp. argyrosperma]5.5e-2371.43Show/hide
Query:  SSSSSSSSSFQCKRNPIAIFIFLLLLLLLLSGFSSATRPGKTMEHHGNNPDMSNSYFNYMTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDSVPPN
        SSSSSSSSS        AIF+   LLLLL+SGF SATRPGKTM H    PD+ N  FNY TGFRYVGQTFS+LPRGVPIPPSGPSDRHNS+VDS+PP+
Subjt:  SSSSSSSSSFQCKRNPIAIFIFLLLLLLLLSGFSSATRPGKTMEHHGNNPDMSNSYFNYMTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDSVPPN
KGN52035.1 hypothetical protein Csa_008746 [Cucumis sativus]1.9e-2369.81Show/hide
Query:  MPSSSSSSSSSSSSSSSFQCKRNPIAIFIFLLLLLLLLSGFSSATRPGKTMEHHGNNPDMSNSYFNYMTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVV
        MPSSSS +S               I IFI LLLLLLLLSG SSATRPGKTME    NPDMSNS   Y T FRY GQTFSFLP+GVPIPPSGPSDRHNSVV
Subjt:  MPSSSSSSSSSSSSSSSFQCKRNPIAIFIFLLLLLLLLSGFSSATRPGKTMEHHGNNPDMSNSYFNYMTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVV

Query:  DSVPPN
        DS+PPN
Subjt:  DSVPPN
TYK09072.1 putative Membrane lipoprotein [Cucumis melo var. makuwa]2.1e-2777.88Show/hide
Query:  SSSSSSSSSSSSSSSFQCKRNPIAIFIFLLLLLLLLSGFSSATRPGKTMEHHGNNPDMSNSYFNYMTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDS
        SSSSSSSSSSSSSSSFQ K+N I IFI   LLLLLLSGFSSATRPG TME     PDMSNS +   T FRY GQTF FLP+GVPIPPSGPSDRHNSVVDS
Subjt:  SSSSSSSSSSSSSSSFQCKRNPIAIFIFLLLLLLLLSGFSSATRPGKTMEHHGNNPDMSNSYFNYMTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDS

Query:  VPPN
        +PPN
Subjt:  VPPN
TrEMBL top hitse value%identityAlignment
A0A0A0KR07 Uncharacterized protein9.1e-2469.81Show/hide
Query:  MPSSSSSSSSSSSSSSSFQCKRNPIAIFIFLLLLLLLLSGFSSATRPGKTMEHHGNNPDMSNSYFNYMTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVV
        MPSSSS +S               I IFI LLLLLLLLSG SSATRPGKTME    NPDMSNS   Y T FRY GQTFSFLP+GVPIPPSGPSDRHNSVV
Subjt:  MPSSSSSSSSSSSSSSSFQCKRNPIAIFIFLLLLLLLLSGFSSATRPGKTMEHHGNNPDMSNSYFNYMTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVV

Query:  DSVPPN
        DS+PPN
Subjt:  DSVPPN
A0A5A7SV51 Putative Membrane lipoprotein3.2e-2978.3Show/hide
Query:  MPSSSSSSSSSSSSSSSFQCKRNPIAIFIFLLLLLLLLSGFSSATRPGKTMEHHGNNPDMSNSYFNYMTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVV
        MPSSSSSSSSSSSSSSSFQ K+N I IFI   LLLLLLSGFSSATRPG TME     PDMSNS +   T FRY GQTF FLP+GVPIPPSGPSDRHNSVV
Subjt:  MPSSSSSSSSSSSSSSSFQCKRNPIAIFIFLLLLLLLLSGFSSATRPGKTMEHHGNNPDMSNSYFNYMTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVV

Query:  DSVPPN
        DS+PPN
Subjt:  DSVPPN
A0A5D2EBI1 Uncharacterized protein2.5e-1351.14Show/hide
Query:  SSSFQCKRNPIAIFIFLLLLLLLLSGFSSATRPGKTMEHHGNNPDMSNSYFNYMTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDS
        S    C R  ++  I+++ L+ LL+G S ATRPGKT+    +   M+     Y TGFRY GQ F+F P+G+PIPPSGPS RHNSVVDS
Subjt:  SSSFQCKRNPIAIFIFLLLLLLLLSGFSSATRPGKTMEHHGNNPDMSNSYFNYMTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDS
A0A5D3CCP4 Putative Membrane lipoprotein1.0e-2777.88Show/hide
Query:  SSSSSSSSSSSSSSSFQCKRNPIAIFIFLLLLLLLLSGFSSATRPGKTMEHHGNNPDMSNSYFNYMTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDS
        SSSSSSSSSSSSSSSFQ K+N I IFI   LLLLLLSGFSSATRPG TME     PDMSNS +   T FRY GQTF FLP+GVPIPPSGPSDRHNSVVDS
Subjt:  SSSSSSSSSSSSSSSFQCKRNPIAIFIFLLLLLLLLSGFSSATRPGKTMEHHGNNPDMSNSYFNYMTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDS

Query:  VPPN
        +PPN
Subjt:  VPPN
A0A7J9EIZ4 Uncharacterized protein1.5e-1351.11Show/hide
Query:  SSSFQCKRNPIAIFIFLLLLLLLLSGFSSATRPGKTMEHHGNNPDMSNSYF--NYMTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDS
        S    C R  ++  I+++ L+ LL+G S ATRPGKT+     +  +S + F   Y TGFRY GQ F+F P+G+PIPPSGPS RHNSVVDS
Subjt:  SSSFQCKRNPIAIFIFLLLLLLLLSGFSSATRPGKTMEHHGNNPDMSNSYF--NYMTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDS
SwissProt top hitse value%identityAlignment
Q8LAD7 Protein IDA3.1e-0540.7Show/hide
Query:  PIAIFIFLLLLLLLLSGFSS---ATRPGKTMEHHGNNPDMS--NSYFNYMTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDSVP
        P    + LL  +L L+  SS   A R G TME   N   ++  NS+             F +LP+GVPIPPS PS RHNS V+S+P
Subjt:  PIAIFIFLLLLLLLLSGFSS---ATRPGKTMEHHGNNPDMS--NSYFNYMTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDSVP
Arabidopsis top hitse value%identityAlignment
AT1G68765.1 Putative membrane lipoprotein2.2e-0640.7Show/hide
Query:  PIAIFIFLLLLLLLLSGFSS---ATRPGKTMEHHGNNPDMS--NSYFNYMTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDSVP
        P    + LL  +L L+  SS   A R G TME   N   ++  NS+             F +LP+GVPIPPS PS RHNS V+S+P
Subjt:  PIAIFIFLLLLLLLLSGFSS---ATRPGKTMEHHGNNPDMS--NSYFNYMTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDSVP
AT3G25655.1 inflorescence deficient in abscission (IDA)-like 14.6e-0432.47Show/hide
Query:  IFIFLLLLLLLLSGFSSATRPGKTMEHHGNNPDMSNSYFNYMTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDSV
        +F+ L ++ LL+ G  +AT     ++        + S    + GF + G+ F    + V +PPSGPS RHNSVV+++
Subjt:  IFIFLLLLLLLLSGFSSATRPGKTMEHHGNNPDMSNSYFNYMTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDSV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTCCAATGCAAACGCAACCCCATCGCCATTTTCATCTTTCTTCTTCTTCTTCTTCTTCT
TCTTTCTGGGTTTTCCTCTGCCACTCGCCCAGGTAAAACGATGGAACATCATGGGAACAATCCCGACATGTCGAATTCTTATTTCAATTACATGACTGGCTTCCGATATG
TCGGTCAAACCTTCAGCTTTCTTCCCAGAGGCGTTCCGATTCCTCCTTCCGGCCCTTCCGACCGCCACAACTCTGTAGTTGACTCTGTTCCTCCCAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTCCAATGCAAACGCAACCCCATCGCCATTTTCATCTTTCTTCTTCTTCTTCTTCTTCT
TCTTTCTGGGTTTTCCTCTGCCACTCGCCCAGGTAAAACGATGGAACATCATGGGAACAATCCCGACATGTCGAATTCTTATTTCAATTACATGACTGGCTTCCGATATG
TCGGTCAAACCTTCAGCTTTCTTCCCAGAGGCGTTCCGATTCCTCCTTCCGGCCCTTCCGACCGCCACAACTCTGTAGTTGACTCTGTTCCTCCCAATTGA
Protein sequenceShow/hide protein sequence
MPSSSSSSSSSSSSSSSFQCKRNPIAIFIFLLLLLLLLSGFSSATRPGKTMEHHGNNPDMSNSYFNYMTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVVDSVPPN