CuGenDBv2

Gene ID	Lsi04G003060
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	DNL-type domain-containing protein
Genome location	chr04:3103515..3106278
RNA-Seq Expression	Lsi04G003060
Synteny	Lsi04G003060
Gene Ontology terms	GO:0006457 - protein folding (biological process) GO:0030150 - protein import into mitochondrial matrix (biological process) GO:0050821 - protein stabilization (biological process) GO:0005739 - mitochondrion (cellular component) GO:0008270 - zinc ion binding (molecular function) GO:0051087 - chaperone binding (molecular function)
InterPro domains	IPR007853 - Zinc finger, DNL-type IPR024158 - Mitochondrial import protein TIM15

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6601335.1 DNL-type zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]

6.2e-56

69.32

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Query:  MAVAKTVFFSSPALLHQSFNSWETRRHPSINPFKPIVFSQANPSNGVFIRSRNFPTAPVTRERGNKVLTVSRLVDVYPGDDDESAQRNSDTGAAIDIKLP
        MA AKT++FSSPALL QSFNS +TR HPSI  F+PIV S+ANPSN  FIRSR+F TAPVTRE  NKVLTVSRLVD   GDDDESAQRNSDTGAAIDIKLP
Subjt:  MAVAKTVFFSSPALLHQSFNSWETRRHPSINPFKPIVFSQANPSNGVFIRSRNFPTAPVTRERGNKVLTVSRLVDVYPGDDDESAQRNSDTGAAIDIKLP

Query:  RRSLMVHHYISMFYCDECYDRFWNSIKAFDMMNHFVLAIRCAGCQKYHKLVDNLGLIVEYDFREENMDVDSNSDQV
        RRSL+V      F C++C DR    I         V  ++CAGC KYHKLVDNLGLIVEYDFRE+++DV+SNSDQV
Subjt:  RRSLMVHHYISMFYCDECYDRFWNSIKAFDMMNHFVLAIRCAGCQKYHKLVDNLGLIVEYDFREENMDVDSNSDQV

KAG7032119.1 DNL-type zinc finger protein [Cucurbita argyrosperma subsp. argyrosperma]

4.8e-56

69.89

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Query:  MAVAKTVFFSSPALLHQSFNSWETRRHPSINPFKPIVFSQANPSNGVFIRSRNFPTAPVTRERGNKVLTVSRLVDVYPGDDDESAQRNSDTGAAIDIKLP
        MA AKT+ FSSPALL QSFN  +TR HPSIN F+PIV S+ANPSNG FIRSR F TAPVTRE  NKVLTVSRLVD   GDDDESAQRNSDTGAAIDIKLP
Subjt:  MAVAKTVFFSSPALLHQSFNSWETRRHPSINPFKPIVFSQANPSNGVFIRSRNFPTAPVTRERGNKVLTVSRLVDVYPGDDDESAQRNSDTGAAIDIKLP

Query:  RRSLMVHHYISMFYCDECYDRFWNSIKAFDMMNHFVLAIRCAGCQKYHKLVDNLGLIVEYDFREENMDVDSNSDQV
        RRSL+V      F C++C DR    I         V  ++CAGC KYHKLVDNLGLIVEYDFRE+++DV+SNSDQV
Subjt:  RRSLMVHHYISMFYCDECYDRFWNSIKAFDMMNHFVLAIRCAGCQKYHKLVDNLGLIVEYDFREENMDVDSNSDQV

XP_008446529.1 PREDICTED: uncharacterized protein C24H6.02c isoform X1 [Cucumis melo]

1.3e-56

69.89

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Query:  MAVAKTVFFSSPALLHQSFNSWETRRHPSINPFKPIVFSQANPSNGVFIRSRNFPTAPVTRERGNKVLTVSRLVDVYPGDDDESAQRNSDTGAAIDIKLP
        MA AKTV FSSP LLH  FN  +T  HPSIN FKPI+ S+ANPSNGVFIRSRNF TAPVTR R  KVLTVS LVD Y GDDDES+QRNSDTGAAIDIKLP
Subjt:  MAVAKTVFFSSPALLHQSFNSWETRRHPSINPFKPIVFSQANPSNGVFIRSRNFPTAPVTRERGNKVLTVSRLVDVYPGDDDESAQRNSDTGAAIDIKLP

Query:  RRSLMVHHYISMFYCDECYDRFWNSIKAFDMMNHFVLAIRCAGCQKYHKLVDNLGLIVEYDFREENMDVDSNSDQV
        RRSLMV      F C++C +R    I         V  ++CAGCQKYHKLVDNLGLIVEYDFREE+ D+DSNSDQV
Subjt:  RRSLMVHHYISMFYCDECYDRFWNSIKAFDMMNHFVLAIRCAGCQKYHKLVDNLGLIVEYDFREENMDVDSNSDQV

XP_022956509.1 uncharacterized protein LOC111458229 isoform X1 [Cucurbita moschata]

1.1e-55

69.89

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Query:  MAVAKTVFFSSPALLHQSFNSWETRRHPSINPFKPIVFSQANPSNGVFIRSRNFPTAPVTRERGNKVLTVSRLVDVYPGDDDESAQRNSDTGAAIDIKLP
        MA AKT  FSSPALL QSFN  +TR HPSIN F+PIV S+ANPSNG FIRSR F TAPVTRE  NKVLTVSRLVD   GDDDESAQRNSDTGAAIDIKLP
Subjt:  MAVAKTVFFSSPALLHQSFNSWETRRHPSINPFKPIVFSQANPSNGVFIRSRNFPTAPVTRERGNKVLTVSRLVDVYPGDDDESAQRNSDTGAAIDIKLP

Query:  RRSLMVHHYISMFYCDECYDRFWNSIKAFDMMNHFVLAIRCAGCQKYHKLVDNLGLIVEYDFREENMDVDSNSDQV
        RRSL+V      F C++C DR    I         V  ++CAGC KYHKLVDNLGLIVEYDFRE+++DV+SNSDQV
Subjt:  RRSLMVHHYISMFYCDECYDRFWNSIKAFDMMNHFVLAIRCAGCQKYHKLVDNLGLIVEYDFREENMDVDSNSDQV

XP_038891803.1 uncharacterized protein C24H6.02c [Benincasa hispida]

5.5e-60

73.3

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Query:  MAVAKTVFFSSPALLHQSFNSWETRRHPSINPFKPIVFSQANPSNGVFIRSRNFPTAPVTRERGNKVLTVSRLVDVYPGDDDESAQRNSDTGAAIDIKLP
        MA AKTV+FSSPALLH SFNS ETR   SIN FK I+FS+ANPSNGVFIRSRNF T PVTRER  KVLTVSRLVD YPGDDDESAQRNSDT AAIDIKLP
Subjt:  MAVAKTVFFSSPALLHQSFNSWETRRHPSINPFKPIVFSQANPSNGVFIRSRNFPTAPVTRERGNKVLTVSRLVDVYPGDDDESAQRNSDTGAAIDIKLP

Query:  RRSLMVHHYISMFYCDECYDRFWNSIKAFDMMNHFVLAIRCAGCQKYHKLVDNLGLIVEYDFREENMDVDSNSDQV
        RRSLMV      F C++C +R    I         V  ++CAGCQKYHKLVDNLGLIVEYDFREE+MD+DSNSDQV
Subjt:  RRSLMVHHYISMFYCDECYDRFWNSIKAFDMMNHFVLAIRCAGCQKYHKLVDNLGLIVEYDFREENMDVDSNSDQV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KR03 DNL-type domain-containing protein

1.1e-55

68.75

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Query:  MAVAKTVFFSSPALLHQSFNSWETRRHPSINPFKPIVFSQANPSNGVFIRSRNFPTAPVTRERGNKVLTVSRLVDVYPGDDDESAQRNSDTGAAIDIKLP
        MA A TV FSSP LL  SFN  +TR HPSI  FKPIV S+ANPSNGVFIRSRNF TAPV+RER  KVLTVS LVD Y GDDDE +QRNSDTGAAIDIKLP
Subjt:  MAVAKTVFFSSPALLHQSFNSWETRRHPSINPFKPIVFSQANPSNGVFIRSRNFPTAPVTRERGNKVLTVSRLVDVYPGDDDESAQRNSDTGAAIDIKLP

Query:  RRSLMVHHYISMFYCDECYDRFWNSIKAFDMMNHFVLAIRCAGCQKYHKLVDNLGLIVEYDFREENMDVDSNSDQV
        RRSLMV      F C++C +R    I         V  ++CAGCQKYHKLVDNLGLIVEYDFREE++D+DS+SDQV
Subjt:  RRSLMVHHYISMFYCDECYDRFWNSIKAFDMMNHFVLAIRCAGCQKYHKLVDNLGLIVEYDFREENMDVDSNSDQV

A0A1S3BG31 uncharacterized protein C24H6.02c isoform X1

6.1e-57

69.89

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Query:  MAVAKTVFFSSPALLHQSFNSWETRRHPSINPFKPIVFSQANPSNGVFIRSRNFPTAPVTRERGNKVLTVSRLVDVYPGDDDESAQRNSDTGAAIDIKLP
        MA AKTV FSSP LLH  FN  +T  HPSIN FKPI+ S+ANPSNGVFIRSRNF TAPVTR R  KVLTVS LVD Y GDDDES+QRNSDTGAAIDIKLP
Subjt:  MAVAKTVFFSSPALLHQSFNSWETRRHPSINPFKPIVFSQANPSNGVFIRSRNFPTAPVTRERGNKVLTVSRLVDVYPGDDDESAQRNSDTGAAIDIKLP

Query:  RRSLMVHHYISMFYCDECYDRFWNSIKAFDMMNHFVLAIRCAGCQKYHKLVDNLGLIVEYDFREENMDVDSNSDQV
        RRSLMV      F C++C +R    I         V  ++CAGCQKYHKLVDNLGLIVEYDFREE+ D+DSNSDQV
Subjt:  RRSLMVHHYISMFYCDECYDRFWNSIKAFDMMNHFVLAIRCAGCQKYHKLVDNLGLIVEYDFREENMDVDSNSDQV

A0A5A7SVJ1 Mitochondrial protein import protein ZIM17 isoform X2

6.1e-57

69.89

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Query:  MAVAKTVFFSSPALLHQSFNSWETRRHPSINPFKPIVFSQANPSNGVFIRSRNFPTAPVTRERGNKVLTVSRLVDVYPGDDDESAQRNSDTGAAIDIKLP
        MA AKTV FSSP LLH  FN  +T  HPSIN FKPI+ S+ANPSNGVFIRSRNF TAPVTR R  KVLTVS LVD Y GDDDES+QRNSDTGAAIDIKLP
Subjt:  MAVAKTVFFSSPALLHQSFNSWETRRHPSINPFKPIVFSQANPSNGVFIRSRNFPTAPVTRERGNKVLTVSRLVDVYPGDDDESAQRNSDTGAAIDIKLP

Query:  RRSLMVHHYISMFYCDECYDRFWNSIKAFDMMNHFVLAIRCAGCQKYHKLVDNLGLIVEYDFREENMDVDSNSDQV
        RRSLMV      F C++C +R    I         V  ++CAGCQKYHKLVDNLGLIVEYDFREE+ D+DSNSDQV
Subjt:  RRSLMVHHYISMFYCDECYDRFWNSIKAFDMMNHFVLAIRCAGCQKYHKLVDNLGLIVEYDFREENMDVDSNSDQV

A0A6J1GZ90 uncharacterized protein LOC111458229 isoform X1

5.2e-56

69.89

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Query:  MAVAKTVFFSSPALLHQSFNSWETRRHPSINPFKPIVFSQANPSNGVFIRSRNFPTAPVTRERGNKVLTVSRLVDVYPGDDDESAQRNSDTGAAIDIKLP
        MA AKT  FSSPALL QSFN  +TR HPSIN F+PIV S+ANPSNG FIRSR F TAPVTRE  NKVLTVSRLVD   GDDDESAQRNSDTGAAIDIKLP
Subjt:  MAVAKTVFFSSPALLHQSFNSWETRRHPSINPFKPIVFSQANPSNGVFIRSRNFPTAPVTRERGNKVLTVSRLVDVYPGDDDESAQRNSDTGAAIDIKLP

Query:  RRSLMVHHYISMFYCDECYDRFWNSIKAFDMMNHFVLAIRCAGCQKYHKLVDNLGLIVEYDFREENMDVDSNSDQV
        RRSL+V      F C++C DR    I         V  ++CAGC KYHKLVDNLGLIVEYDFRE+++DV+SNSDQV
Subjt:  RRSLMVHHYISMFYCDECYDRFWNSIKAFDMMNHFVLAIRCAGCQKYHKLVDNLGLIVEYDFREENMDVDSNSDQV

A0A6J1J9C7 DNL-type zinc finger protein isoform X1

5.7e-55

68.18

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Query:  MAVAKTVFFSSPALLHQSFNSWETRRHPSINPFKPIVFSQANPSNGVFIRSRNFPTAPVTRERGNKVLTVSRLVDVYPGDDDESAQRNSDTGAAIDIKLP
        MA AKT+ FSSPALL QSFN  +TR HPSI  F+PIV S+ANPSNG FI SR+F TAPVTRE  NKVLTVSRLVD   GDDDESAQRNSDTGAAIDIKLP
Subjt:  MAVAKTVFFSSPALLHQSFNSWETRRHPSINPFKPIVFSQANPSNGVFIRSRNFPTAPVTRERGNKVLTVSRLVDVYPGDDDESAQRNSDTGAAIDIKLP

Query:  RRSLMVHHYISMFYCDECYDRFWNSIKAFDMMNHFVLAIRCAGCQKYHKLVDNLGLIVEYDFREENMDVDSNSDQV
        RRSL+V      F C++C DR    I         V  ++CAGC KYHKLVDNLGLIVEYDFR++++DV+SNSDQV
Subjt:  RRSLMVHHYISMFYCDECYDRFWNSIKAFDMMNHFVLAIRCAGCQKYHKLVDNLGLIVEYDFREENMDVDSNSDQV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G68730.1 Zim17-type zinc finger protein

3.0e-16

35.43

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Query:  VAKTVFFSSPAL--LHQSFNSWETRRHPSINPFKP--IVFSQANPSNGVFIRSRNFPTAPVTRERGNKVLTV-SRLVDVYPGDDDESAQRNSDTGAAIDI
        +A T    SP L  ++   N+     H S + +KP    + Q NP + +           VT ++ N+  +V   L D    + DE +  +++  A+IDI
Subjt:  VAKTVFFSSPAL--LHQSFNSWETRRHPSINPFKP--IVFSQANPSNGVFIRSRNFPTAPVTRERGNKVLTV-SRLVDVYPGDDDESAQRNSDTGAAIDI

Query:  KLPRRSLMVHHYISMFYCDECYDRFWNSIKAFDMMNHFVLAIRCAGCQKYHKLVDNLGLIVEYDFREENMDVDSN
        KLPRRSL V      F C+ C +R    I         V  ++CAGC K+HKLVDNLGLIVEYDFRE + D+ ++
Subjt:  KLPRRSLMVHHYISMFYCDECYDRFWNSIKAFDMMNHFVLAIRCAGCQKYHKLVDNLGLIVEYDFREENMDVDSN

Sequences

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CDS sequence

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ATGGCCGTGGCAAAGACTGTATTCTTCTCCTCTCCCGCGCTTCTTCACCAGTCCTTCAACTCTTGGGAGACTCGGCGACATCCATCTATCAACCCATTCAAACCTATAGT
CTTTTCGCAAGCAAACCCTAGCAATGGCGTCTTCATTAGAAGTAGAAACTTCCCTACAGCACCAGTTACTCGGGAACGCGGAAATAAGGTGCTTACGGTTTCCAGATTGG
TGGATGTTTATCCTGGAGACGACGATGAATCTGCACAGAGAAATTCAGATACGGGGGCAGCCATTGACATAAAGCTTCCAAGAAGAAGTTTGATGGTACACCATTACATT
TCAATGTTCTATTGTGATGAATGCTACGATCGATTTTGGAATTCTATCAAAGCATTTGATATGATGAACCATTTTGTATTAGCAATTCGATGTGCAGGGTGTCAAAAGTA
TCACAAATTGGTTGATAATCTTGGCCTTATAGTTGAATATGACTTTCGGGAGGAGAACATGGATGTGGACTCAAATTCAGATCAAGTTTGA

mRNA sequence

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GTCCAATTGAAATTAGCCAGTTACCTAATGATAACAATATTCTTCGATCAAGTGTCGTTTGTTAATTGGAGGCTGCAGGAAAACGACATGTCGGCTTTCTAGAGTATGAA
GAGAGCAACAGGAGGGGCAGCTTACTGAATAAGCGACAACTGCATCCATGGCCGTGGCAAAGACTGTATTCTTCTCCTCTCCCGCGCTTCTTCACCAGTCCTTCAACTCT
TGGGAGACTCGGCGACATCCATCTATCAACCCATTCAAACCTATAGTCTTTTCGCAAGCAAACCCTAGCAATGGCGTCTTCATTAGAAGTAGAAACTTCCCTACAGCACC
AGTTACTCGGGAACGCGGAAATAAGGTGCTTACGGTTTCCAGATTGGTGGATGTTTATCCTGGAGACGACGATGAATCTGCACAGAGAAATTCAGATACGGGGGCAGCCA
TTGACATAAAGCTTCCAAGAAGAAGTTTGATGGTACACCATTACATTTCAATGTTCTATTGTGATGAATGCTACGATCGATTTTGGAATTCTATCAAAGCATTTGATATG
ATGAACCATTTTGTATTAGCAATTCGATGTGCAGGGTGTCAAAAGTATCACAAATTGGTTGATAATCTTGGCCTTATAGTTGAATATGACTTTCGGGAGGAGAACATGGA
TGTGGACTCAAATTCAGATCAAGTTTGATGTCGTTCAATGATGTCATTTCCTTTTACGACTTTCACTTTGAATCGGCCCCACAACTTTCTTGAAAATTCATGCAGAAGGC
TGATTCCCTCTTCTTTTTTCCTTATCCCTCCTGGTTCTTTGCAATCCCATCGATTCCTTCAGGGACAGATATATCACAGTTTGGCAGGAAAAATGGATTGTTATTTATAG
CATTTGATCAGGGTAAATGTAAAGGTAGGCTTATATCTGCAGCTAGTCATGTTGATGTATAACTTTGAATCATATGCTTCAATGAGCTGATGATGATTATTAAAATATTC
AGGTTGCAATTAGCAAGGAATTATCAGTTTACTCATTTCAAGGTCGATGTTTCAATCTCCAACTCTTGCAATTGATGAACTCTAGAAAAGGAATGATTGATTTACTACTT
GCTCACTTATTGTTAGATACAAATCAACATATGCACTCTGATCATCTCATTTCCATTACAAACAGAACAATATGTGGAAAATGTTATGCATCTTGGTAATAAATTTTGAT
GG

Protein sequence

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MAVAKTVFFSSPALLHQSFNSWETRRHPSINPFKPIVFSQANPSNGVFIRSRNFPTAPVTRERGNKVLTVSRLVDVYPGDDDESAQRNSDTGAAIDIKLPRRSLMVHHYI
SMFYCDECYDRFWNSIKAFDMMNHFVLAIRCAGCQKYHKLVDNLGLIVEYDFREENMDVDSNSDQV

Lsi04G003060 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome