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Lsi04G003270 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G003270
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr04:3339650..3340063
RNA-Seq ExpressionLsi04G003270
SyntenyLsi04G003270
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY01535.1 Uncharacterized protein TCM_011399 [Theobroma cacao]1.1e-1847.86Show/hide
Query:  ISPETSFAQHFPILGEKCSSLDISTNLLYCILCFSFKTVTLILLFPYEQVDGNPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKPKIAKFCSY
        +S   +F  H     E  SS+ + T +L  IL  SF   T+++L P+E V G+PVP I+FKG P+TFHAF + I+ AFSGAF ALM   N P+IA  C  
Subjt:  ISPETSFAQHFPILGEKCSSLDISTNLLYCILCFSFKTVTLILLFPYEQVDGNPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKPKIAKFCSY

Query:  YSMGFMALAVVLLFWAV
        YS+  MA A+ LL WAV
Subjt:  YSMGFMALAVVLLFWAV

KAE8648779.1 hypothetical protein Csa_009128 [Cucumis sativus]4.0e-3464.44Show/hide
Query:  MKNTGDINISPETSFAQHFPILGEKCSSLDISTNLLYCILCFSFKTVTLILLFPYEQVDGNPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKP
        MKN  DIN SP+T FAQHF IL                                   V+GN VPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKP
Subjt:  MKNTGDINISPETSFAQHFPILGEKCSSLDISTNLLYCILCFSFKTVTLILLFPYEQVDGNPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKP

Query:  KIAKFCSYYSMGFMALAVVLLFWAVFQTVLNLRQW
        KIAKFCSYYS+GFM  AVVL FWAVFQTV NLRQW
Subjt:  KIAKFCSYYSMGFMALAVVLLFWAVFQTVLNLRQW

KAG6601352.1 hypothetical protein SDJN03_06585, partial [Cucurbita argyrosperma subsp. sororia]2.6e-5783.21Show/hide
Query:  MKNTGDINISPETSFAQHFPILGEKCSSLDISTNLLYCILCFSFKTVTLILLFPYEQVDGNPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKP
        MKN G IN+SPETSF QHF ILG+ CS LDISTNL+YCILC SFKTVTLILLFPYEQV+GNPVP +IFKGLPSTFHAFLLS VMAFSGAFNALML+ NKP
Subjt:  MKNTGDINISPETSFAQHFPILGEKCSSLDISTNLLYCILCFSFKTVTLILLFPYEQVDGNPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKP

Query:  KIAKFCSYYSMGFMALAVVLLFWAVFQTVLNLRQWQD
        KIA+FCSYYSM FMA AVVLL WAV+QTV N RQWQD
Subjt:  KIAKFCSYYSMGFMALAVVLLFWAVFQTVLNLRQWQD

XP_003518808.1 uncharacterized protein LOC100777541 [Glycine max]5.2e-1851.55Show/hide
Query:  LLYCILCFSFKTVTLILLFPYEQVDGNPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKPKIAKFCSYYSMGFMALAVVLLFWAVFQTVLN
        LL C+L   FK +T++L  PYE +D NP+P I+FKG P TFHAF+  I+ AFSGA NAL +A NK + ++ C YY+M  MA A+ +L WAV  T +N
Subjt:  LLYCILCFSFKTVTLILLFPYEQVDGNPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKPKIAKFCSYYSMGFMALAVVLLFWAVFQTVLN

XP_022992466.1 uncharacterized protein LOC111488762 [Cucurbita maxima]2.0e-5783.94Show/hide
Query:  MKNTGDINISPETSFAQHFPILGEKCSSLDISTNLLYCILCFSFKTVTLILLFPYEQVDGNPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKP
        MKN G IN+SPETSF QHF ILG+ CS LDISTNL+YCILC SFKTVTLILLFPYEQV+GNPVP IIFKGLPSTFHAFLLS VMAFSGAFNALML+ NKP
Subjt:  MKNTGDINISPETSFAQHFPILGEKCSSLDISTNLLYCILCFSFKTVTLILLFPYEQVDGNPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKP

Query:  KIAKFCSYYSMGFMALAVVLLFWAVFQTVLNLRQWQD
        KIA+FCSYYSM FMA AVVLL WAV+QTV N RQWQD
Subjt:  KIAKFCSYYSMGFMALAVVLLFWAVFQTVLNLRQWQD

TrEMBL top hitse value%identityAlignment
A0A0A0KT20 Uncharacterized protein1.6e-5787.41Show/hide
Query:  MKNTGDINISPETSFAQHFPILGEKCSSLDISTNLLYCILCFSFKTVTLILLFPYEQVDGNPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKP
        MKN  DIN SP+T FAQHF ILG+ CSSLDISTNLLY ILC SFKTVTLILLFPYEQV+GN VPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKP
Subjt:  MKNTGDINISPETSFAQHFPILGEKCSSLDISTNLLYCILCFSFKTVTLILLFPYEQVDGNPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKP

Query:  KIAKFCSYYSMGFMALAVVLLFWAVFQTVLNLRQW
        KIAKFCSYYS+GFM  AVVL FWAVFQTV NLRQW
Subjt:  KIAKFCSYYSMGFMALAVVLLFWAVFQTVLNLRQW

A0A5B7B2L8 Uncharacterized protein (Fragment)3.9e-1956.67Show/hide
Query:  LLYCILCFSFKTVTLILLFPYEQVDGNPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKPKIAKFCSYYSMGFMALAVVLLFWA
        +L  IL  SF T  +++  PYE +DGNPVP IIFKGLPS FHAFL+ I+ AFSGA+  LM+  +KP++A FC Y SM  MA AV L+ WA
Subjt:  LLYCILCFSFKTVTLILLFPYEQVDGNPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKPKIAKFCSYYSMGFMALAVVLLFWA

A0A5B7B2W8 Uncharacterized protein (Fragment)2.3e-1957.78Show/hide
Query:  LLYCILCFSFKTVTLILLFPYEQVDGNPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKPKIAKFCSYYSMGFMALAVVLLFWA
        +L  IL  SF T  +++  PYE +DGNPVP IIFKGLPS FHAFL+ I+ AFSGA+  LM+  +KP++A FC Y SM  MA AV LL WA
Subjt:  LLYCILCFSFKTVTLILLFPYEQVDGNPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKPKIAKFCSYYSMGFMALAVVLLFWA

A0A5B7B649 Uncharacterized protein (Fragment)3.9e-1956.67Show/hide
Query:  LLYCILCFSFKTVTLILLFPYEQVDGNPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKPKIAKFCSYYSMGFMALAVVLLFWA
        +L  IL  SF T  +++  PYE +DGNPVP IIFKGLPS FHAFL+ I+ AFSGA+  LM+  +KP++A FC Y SM  MA AV L+ WA
Subjt:  LLYCILCFSFKTVTLILLFPYEQVDGNPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKPKIAKFCSYYSMGFMALAVVLLFWA

A0A6J1JTM5 uncharacterized protein LOC1114887629.5e-5883.94Show/hide
Query:  MKNTGDINISPETSFAQHFPILGEKCSSLDISTNLLYCILCFSFKTVTLILLFPYEQVDGNPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKP
        MKN G IN+SPETSF QHF ILG+ CS LDISTNL+YCILC SFKTVTLILLFPYEQV+GNPVP IIFKGLPSTFHAFLLS VMAFSGAFNALML+ NKP
Subjt:  MKNTGDINISPETSFAQHFPILGEKCSSLDISTNLLYCILCFSFKTVTLILLFPYEQVDGNPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKP

Query:  KIAKFCSYYSMGFMALAVVLLFWAVFQTVLNLRQWQD
        KIA+FCSYYSM FMA AVVLL WAV+QTV N RQWQD
Subjt:  KIAKFCSYYSMGFMALAVVLLFWAVFQTVLNLRQWQD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAACACTGGAGATATCAATATAAGTCCAGAGACTTCTTTTGCCCAGCATTTCCCTATCCTTGGTGAGAAATGTTCAAGCTTGGACATTTCAACTAATCTCCTGTA
CTGTATATTGTGCTTCTCCTTCAAAACAGTAACCCTTATTCTCTTGTTTCCTTATGAGCAAGTGGATGGGAATCCTGTGCCTGCTATAATCTTCAAAGGCCTTCCATCAA
CATTTCATGCCTTTCTACTTTCAATTGTGATGGCATTCTCAGGCGCATTCAACGCCTTGATGCTTGCTACTAATAAGCCAAAAATTGCCAAGTTTTGCAGCTACTATTCT
ATGGGATTTATGGCTTTAGCTGTAGTTTTATTGTTTTGGGCTGTGTTTCAGACAGTTTTGAACCTGAGACAATGGCAGGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAACACTGGAGATATCAATATAAGTCCAGAGACTTCTTTTGCCCAGCATTTCCCTATCCTTGGTGAGAAATGTTCAAGCTTGGACATTTCAACTAATCTCCTGTA
CTGTATATTGTGCTTCTCCTTCAAAACAGTAACCCTTATTCTCTTGTTTCCTTATGAGCAAGTGGATGGGAATCCTGTGCCTGCTATAATCTTCAAAGGCCTTCCATCAA
CATTTCATGCCTTTCTACTTTCAATTGTGATGGCATTCTCAGGCGCATTCAACGCCTTGATGCTTGCTACTAATAAGCCAAAAATTGCCAAGTTTTGCAGCTACTATTCT
ATGGGATTTATGGCTTTAGCTGTAGTTTTATTGTTTTGGGCTGTGTTTCAGACAGTTTTGAACCTGAGACAATGGCAGGATTAA
Protein sequenceShow/hide protein sequence
MKNTGDINISPETSFAQHFPILGEKCSSLDISTNLLYCILCFSFKTVTLILLFPYEQVDGNPVPAIIFKGLPSTFHAFLLSIVMAFSGAFNALMLATNKPKIAKFCSYYS
MGFMALAVVLLFWAVFQTVLNLRQWQD