; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G003470 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G003470
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr04:3454935..3456436
RNA-Seq ExpressionLsi04G003470
SyntenyLsi04G003470
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034486.1 putative root meristem growth factor 8 [Cucumis melo var. makuwa]1.7e-2067.44Show/hide
Query:  KVEAHGFQVAKQKDNHKENVSGDCYIFFQRMSISQPYGKEENEMYLNEGKGRKWVNVADMSSQIFTMDYAHLKRRRPVHNMSLKRP
        +VE  GFQVAKQ DNHKENVSG+                EE  M LN+ KGRK VNVADMSSQIFTMDYAHLKRRRPVHNMSL RP
Subjt:  KVEAHGFQVAKQKDNHKENVSGDCYIFFQRMSISQPYGKEENEMYLNEGKGRKWVNVADMSSQIFTMDYAHLKRRRPVHNMSLKRP

KAE8648772.1 hypothetical protein Csa_008620 [Cucumis sativus]2.2e-2372.09Show/hide
Query:  KVEAHGFQVAKQKDNHKENVSGDCYIFFQRMSISQPYGKEENEMYLNEGKGRKWVNVADMSSQIFTMDYAHLKRRRPVHNMSLKRP
        KVEA GFQVAKQKDNHKENVS                G+EE    LN+GKGRKWV VADMSSQIFTMDYAHLKRRRPVHNMSLKRP
Subjt:  KVEAHGFQVAKQKDNHKENVSGDCYIFFQRMSISQPYGKEENEMYLNEGKGRKWVNVADMSSQIFTMDYAHLKRRRPVHNMSLKRP

XP_022956442.1 uncharacterized protein LOC111458171 [Cucurbita moschata]1.1e-1761.18Show/hide
Query:  VEAHGFQVAKQKDNHKENVSGDCYIFFQRMSISQPYGKEENEMYLNEGKGRKWVNVADMSSQIFTMDYAHLKRRRPVHNMSLKRP
        VEAHGFQ +KQ+D  KE VSG            Q Y +EE     N+GKGRKW NVADMSS+ FTMDYAH+KRRRPVHNMS +RP
Subjt:  VEAHGFQVAKQKDNHKENVSGDCYIFFQRMSISQPYGKEENEMYLNEGKGRKWVNVADMSSQIFTMDYAHLKRRRPVHNMSLKRP

XP_022977309.1 uncharacterized protein LOC111477668 [Cucurbita maxima]1.3e-1862.35Show/hide
Query:  VEAHGFQVAKQKDNHKENVSGDCYIFFQRMSISQPYGKEENEMYLNEGKGRKWVNVADMSSQIFTMDYAHLKRRRPVHNMSLKRP
        VEAHGFQ +KQ+D  KENVSG            QPY +EE     N+GKGRKW NVADMSS+  TMDYAH+KRRRPVHNMS +RP
Subjt:  VEAHGFQVAKQKDNHKENVSGDCYIFFQRMSISQPYGKEENEMYLNEGKGRKWVNVADMSSQIFTMDYAHLKRRRPVHNMSLKRP

XP_023525366.1 uncharacterized protein LOC111788986 isoform X1 [Cucurbita pepo subsp. pepo]2.4e-1761.18Show/hide
Query:  VEAHGFQVAKQKDNHKENVSGDCYIFFQRMSISQPYGKEENEMYLNEGKGRKWVNVADMSSQIFTMDYAHLKRRRPVHNMSLKRP
        VEAHGFQ +KQ+D  KENVSG            Q Y +EE     N+GKGRKW NV DMSS+ FTMDYAH+KRRRPVHNMS +RP
Subjt:  VEAHGFQVAKQKDNHKENVSGDCYIFFQRMSISQPYGKEENEMYLNEGKGRKWVNVADMSSQIFTMDYAHLKRRRPVHNMSLKRP

TrEMBL top hitse value%identityAlignment
A0A0A0KWA1 Uncharacterized protein1.1e-2372.09Show/hide
Query:  KVEAHGFQVAKQKDNHKENVSGDCYIFFQRMSISQPYGKEENEMYLNEGKGRKWVNVADMSSQIFTMDYAHLKRRRPVHNMSLKRP
        KVEA GFQVAKQKDNHKENVS                G+EE    LN+GKGRKWV VADMSSQIFTMDYAHLKRRRPVHNMSLKRP
Subjt:  KVEAHGFQVAKQKDNHKENVSGDCYIFFQRMSISQPYGKEENEMYLNEGKGRKWVNVADMSSQIFTMDYAHLKRRRPVHNMSLKRP

A0A5D3CCI7 Putative root meristem growth factor 88.5e-2167.44Show/hide
Query:  KVEAHGFQVAKQKDNHKENVSGDCYIFFQRMSISQPYGKEENEMYLNEGKGRKWVNVADMSSQIFTMDYAHLKRRRPVHNMSLKRP
        +VE  GFQVAKQ DNHKENVSG+                EE  M LN+ KGRK VNVADMSSQIFTMDYAHLKRRRPVHNMSL RP
Subjt:  KVEAHGFQVAKQKDNHKENVSGDCYIFFQRMSISQPYGKEENEMYLNEGKGRKWVNVADMSSQIFTMDYAHLKRRRPVHNMSLKRP

A0A6J1D6T9 uncharacterized protein LOC1110175714.8e-1654.12Show/hide
Query:  VEAHGFQVAKQKDNHKENVSGDCYIFFQRMSISQPYGKEENEMYLNEGKGRKWVNVADMSSQIFTMDYAHLKRRRPVHNMSLKRP
        V+AHG  V  Q DNH++NVSG            QPY +E+  M L+  KGRKW++V DMSS+ FTMDY H +RRRPVHNMS +RP
Subjt:  VEAHGFQVAKQKDNHKENVSGDCYIFFQRMSISQPYGKEENEMYLNEGKGRKWVNVADMSSQIFTMDYAHLKRRRPVHNMSLKRP

A0A6J1GWC1 uncharacterized protein LOC1114581715.1e-1861.18Show/hide
Query:  VEAHGFQVAKQKDNHKENVSGDCYIFFQRMSISQPYGKEENEMYLNEGKGRKWVNVADMSSQIFTMDYAHLKRRRPVHNMSLKRP
        VEAHGFQ +KQ+D  KE VSG            Q Y +EE     N+GKGRKW NVADMSS+ FTMDYAH+KRRRPVHNMS +RP
Subjt:  VEAHGFQVAKQKDNHKENVSGDCYIFFQRMSISQPYGKEENEMYLNEGKGRKWVNVADMSSQIFTMDYAHLKRRRPVHNMSLKRP

A0A6J1IR14 uncharacterized protein LOC1114776686.1e-1962.35Show/hide
Query:  VEAHGFQVAKQKDNHKENVSGDCYIFFQRMSISQPYGKEENEMYLNEGKGRKWVNVADMSSQIFTMDYAHLKRRRPVHNMSLKRP
        VEAHGFQ +KQ+D  KENVSG            QPY +EE     N+GKGRKW NVADMSS+  TMDYAH+KRRRPVHNMS +RP
Subjt:  VEAHGFQVAKQKDNHKENVSGDCYIFFQRMSISQPYGKEENEMYLNEGKGRKWVNVADMSSQIFTMDYAHLKRRRPVHNMSLKRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTGGACCAGTCTTCTCCCTTGCAAGGTTGAAGCTCATGGATTCCAAGTTGCCAAACAAAAAGATAACCACAAGGAAAATGTTTCAGGTGATTGCTACATTTTCTT
TCAAAGAATGTCCATAAGTCAGCCTTATGGAAAGGAGGAAAATGAAATGTACTTAAACGAAGGAAAGGGGAGAAAGTGGGTGAATGTGGCCGACATGTCGTCACAGATTT
TCACAATGGACTATGCTCACCTAAAACGTCGTCGTCCCGTTCATAACATGTCGCTCAAGCGTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCTGGACCAGTCTTCTCCCTTGCAAGGTTGAAGCTCATGGATTCCAAGTTGCCAAACAAAAAGATAACCACAAGGAAAATGTTTCAGGTGATTGCTACATTTTCTT
TCAAAGAATGTCCATAAGTCAGCCTTATGGAAAGGAGGAAAATGAAATGTACTTAAACGAAGGAAAGGGGAGAAAGTGGGTGAATGTGGCCGACATGTCGTCACAGATTT
TCACAATGGACTATGCTCACCTAAAACGTCGTCGTCCCGTTCATAACATGTCGCTCAAGCGTCCTTGA
Protein sequenceShow/hide protein sequence
MLWTSLLPCKVEAHGFQVAKQKDNHKENVSGDCYIFFQRMSISQPYGKEENEMYLNEGKGRKWVNVADMSSQIFTMDYAHLKRRRPVHNMSLKRP