; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G003580 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G003580
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRibosome maturation factor RimP
Genome locationchr04:3585339..3587536
RNA-Seq ExpressionLsi04G003580
SyntenyLsi04G003580
Gene Ontology termsGO:0042274 - ribosomal small subunit biogenesis (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013097.1 rimP, partial [Cucurbita argyrosperma subsp. argyrosperma]7.0e-12979.74Show/hide
Query:  MRGNRIAHTLLHRARIAAVSSSLSSVRAPSSIVFGSEATSSQSACSSSS-----RRDHAFAFSPAAALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETT
        M G+RIA TLLHRAR  A  SS SS   PSSIVFG++A SSQS+CSSSS     RR+HAFAFSP+  +RL NTN SK+F+DEVKEHNPLQYGRDEGEETT
Subjt:  MRGNRIAHTLLHRARIAAVSSSLSSVRAPSSIVFGSEATSSQSACSSSS-----RRDHAFAFSPAAALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETT

Query:  DGWEEDDDLEPELGDGGGGGGIVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRG------------LGCPGLEELESYSQEYKKRLDETGALGKI
        DGWEEDDDLEPELGDGGGGGG+VLQGVPWGE VL LA EVLLQFGDDI LYSFK T RG             GCP LEELESYSQEYKKRLDETGALG I
Subjt:  DGWEEDDDLEPELGDGGGGGGIVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRG------------LGCPGLEELESYSQEYKKRLDETGALGKI

Query:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRGTENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLNRKQKEWRLKLPYENHKK
        PDDLALEVSSPGAERLLKVPDDLFRFKAMPMRV YIED +SRGTENDGVFM+DHV+LESESC+WKLANV+ENRDPLSKGRPL RKQK+WRLKLP+ NHKK
Subjt:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRGTENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLNRKQKEWRLKLPYENHKK

Query:  VFLYLE
        VFLYLE
Subjt:  VFLYLE

TYK09031.1 F4N2.17, putative isoform 1 [Cucumis melo var. makuwa]1.6e-12883.85Show/hide
Query:  MRGNRIAHTLLHRARIAAVSSSLSSVRAPSSIVFGSEATSSQSACSSSSRRDHAFAFSPAAALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETTDGWEE
        MRGN+IA TLL R+RI AVSS LSS+ APSS VF SEAT  Q+ CSS S RDHAF FSPA  LRL +T+SSKDF+DEVKE NPLQYGR++  ETTDGWEE
Subjt:  MRGNRIAHTLLHRARIAAVSSSLSSVRAPSSIVFGSEATSSQSACSSSSRRDHAFAFSPAAALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETTDGWEE

Query:  -DDDLEPELGDGGGGGGIVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGLGCPGLEELESYSQEYKKRLDETGALGKIPDDLALEVSSPGAERL
         DDDLEPELGDGG GGG+VLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFK TPR     G+EEL+SYS+EYKKRLDETGALG IPDDLALEVSSPGAERL
Subjt:  -DDDLEPELGDGGGGGGIVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGLGCPGLEELESYSQEYKKRLDETGALGKIPDDLALEVSSPGAERL

Query:  LKVPDDLFRFKAMPMRVSYIEDLDSRGTENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLNRKQKEWRLKLPYENHKKVFLYLEC
        LKVPDDL RFKA PMRVSYIED+DSRG+ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPL RKQKEWRLKLPY NHKKVFLYLEC
Subjt:  LKVPDDLFRFKAMPMRVSYIEDLDSRGTENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLNRKQKEWRLKLPYENHKKVFLYLEC

XP_008446453.1 PREDICTED: uncharacterized protein LOC103489189 isoform X3 [Cucumis melo]2.2e-13081.52Show/hide
Query:  MRGNRIAHTLLHRARIAAVSSSLSSVRAPSSIVFGSEATSSQSACSSSSRRDHAFAFSPAAALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETTDGWEE
        MRGN+IA TLL R+RI AVSS LSS+ APSS VF SEAT  Q+ CSS S RDHAF FSPA  LRL +T+SSKDF+DEVKE NPLQYGR++  ETTDGWEE
Subjt:  MRGNRIAHTLLHRARIAAVSSSLSSVRAPSSIVFGSEATSSQSACSSSSRRDHAFAFSPAAALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETTDGWEE

Query:  -DDDLEPELGDGGGGGGIVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRG------------LGCPGLEELESYSQEYKKRLDETGALGKIPDDL
         DDDLEPELGDGG GGG+VLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFK TPRG             GCP +EEL+SYS+EYKKRLDETGALG IPDDL
Subjt:  -DDDLEPELGDGGGGGGIVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRG------------LGCPGLEELESYSQEYKKRLDETGALGKIPDDL

Query:  ALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRGTENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLNRKQKEWRLKLPYENHKKVFLY
        ALEVSSPGAERLLKVPDDL RFKA PMRVSYIED+DSRG+ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPL RKQKEWRLKLPY NHKKVFLY
Subjt:  ALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRGTENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLNRKQKEWRLKLPYENHKKVFLY

Query:  LEC
        LEC
Subjt:  LEC

XP_022944994.1 uncharacterized protein LOC111449365 [Cucurbita moschata]1.6e-12879.41Show/hide
Query:  MRGNRIAHTLLHRARIAAVSSSLSSVRAPSSIVFGSEATSSQSACSSSS-----RRDHAFAFSPAAALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETT
        M G+RIA TLLHRAR  A  SS SS   PSSIVFG++A SSQS+CSSSS     RR+HAFAFSP+  +RL NTN SK+F+DEVKEHNPLQYGRDEGEETT
Subjt:  MRGNRIAHTLLHRARIAAVSSSLSSVRAPSSIVFGSEATSSQSACSSSS-----RRDHAFAFSPAAALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETT

Query:  DGWEEDDDLEPELGDGGGGGGIVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRG------------LGCPGLEELESYSQEYKKRLDETGALGKI
        DGWEEDDDLEPELGDGGGGGG+VLQGVPWGE VL LA EVLLQFGDDI LYSFK T RG             GCP LEELESYSQEYKKRLDETGALG I
Subjt:  DGWEEDDDLEPELGDGGGGGGIVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRG------------LGCPGLEELESYSQEYKKRLDETGALGKI

Query:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRGTENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLNRKQKEWRLKLPYENHKK
        PDDLALEVSSPGAERLLKVPDDLFRFKAMPMRV YIED +SRGTENDGVFM+DHV+LESESC+WKLANV+ENRDPLSKGRPL RKQK+WRLK+P+ NHKK
Subjt:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRGTENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLNRKQKEWRLKLPYENHKK

Query:  VFLYLE
        VFLYLE
Subjt:  VFLYLE

XP_038891543.1 uncharacterized protein LOC120080930 [Benincasa hispida]4.7e-14187.42Show/hide
Query:  MRGNRIAHTLLHRARIAAVSSSLSSVRAPSSIVFGSEATSSQSACSSSSRRDHAFAFSPAAALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETTDGWEE
        MRGN IAHTLLHRARIAAVSSSLSS+ APSSIVF SEATSSQSACSSSSRRDHAFAF PAA LRL NTNSSKDFQDE KEHNPLQYG DEG ETTDGWEE
Subjt:  MRGNRIAHTLLHRARIAAVSSSLSSVRAPSSIVFGSEATSSQSACSSSSRRDHAFAFSPAAALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETTDGWEE

Query:  DDDLEPELGDGGGGGGIVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRG------------LGCPGLEELESYSQEYKKRLDETGALGKIPDDLA
        DDDLEPELGDGGGGGG+VLQGVPWGE VLLLAQEVLLQFGDDIKLYSFK TPRG             GCP LEELESYSQEYKKRLDETGALG IPDDLA
Subjt:  DDDLEPELGDGGGGGGIVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRG------------LGCPGLEELESYSQEYKKRLDETGALGKIPDDLA

Query:  LEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRGTENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLNRKQKEWRLKLPYENHKKVFLYL
        LEVSSPGAERLLKVPDDLFRFKA+PMRVSYIE++DSRGTENDGV+MLD VE E E CIWKLANVRENRDPLSKGRPL RKQKEWRLKLPY NHKKVFLYL
Subjt:  LEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRGTENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLNRKQKEWRLKLPYENHKKVFLYL

Query:  EC
        EC
Subjt:  EC

TrEMBL top hitse value%identityAlignment
A0A1S3BEL4 uncharacterized protein LOC103489189 isoform X14.6e-12681.08Show/hide
Query:  MRGNRIAHTLLHRARIAAVSSSLSSVRAPSSIVFGSEATSSQSACSSSSRRDHAFAFSPAAALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETTDGWEE
        MRGN+IA TLL R+RI AVSS LSS+ APSS VF SEAT  Q+ CSS S RDHAF FSPA  LRL +T+SSKDF+DEVKE NPLQYGR++  ETTDGWEE
Subjt:  MRGNRIAHTLLHRARIAAVSSSLSSVRAPSSIVFGSEATSSQSACSSSSRRDHAFAFSPAAALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETTDGWEE

Query:  -DDDLEPELGDGGGGGGIVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRG------------LGCPGLEELESYSQEYKKRLDETGALGKIPDDL
         DDDLEPELGDGG GGG+VLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFK TPRG             GCP +EEL+SYS+EYKKRLDETGALG IPDDL
Subjt:  -DDDLEPELGDGGGGGGIVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRG------------LGCPGLEELESYSQEYKKRLDETGALGKIPDDL

Query:  ALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRGTENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLNRKQKEWRLKLPYENHKK
        ALEVSSPGAERLLKVPDDL RFKA PMRVSYIED+DSRG+ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPL RKQKEWRLKLPY NHKK
Subjt:  ALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRGTENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLNRKQKEWRLKLPYENHKK

A0A1S3BF35 uncharacterized protein LOC103489189 isoform X24.6e-12681.08Show/hide
Query:  MRGNRIAHTLLHRARIAAVSSSLSSVRAPSSIVFGSEATSSQSACSSSSRRDHAFAFSPAAALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETTDGWEE
        MRGN+IA TLL R+RI AVSS LSS+ APSS VF SEAT  Q+ CSS S RDHAF FSPA  LRL +T+SSKDF+DEVKE NPLQYGR++  ETTDGWEE
Subjt:  MRGNRIAHTLLHRARIAAVSSSLSSVRAPSSIVFGSEATSSQSACSSSSRRDHAFAFSPAAALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETTDGWEE

Query:  -DDDLEPELGDGGGGGGIVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRG------------LGCPGLEELESYSQEYKKRLDETGALGKIPDDL
         DDDLEPELGDGG GGG+VLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFK TPRG             GCP +EEL+SYS+EYKKRLDETGALG IPDDL
Subjt:  -DDDLEPELGDGGGGGGIVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRG------------LGCPGLEELESYSQEYKKRLDETGALGKIPDDL

Query:  ALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRGTENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLNRKQKEWRLKLPYENHKK
        ALEVSSPGAERLLKVPDDL RFKA PMRVSYIED+DSRG+ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPL RKQKEWRLKLPY NHKK
Subjt:  ALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRGTENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLNRKQKEWRLKLPYENHKK

A0A1S3BF38 uncharacterized protein LOC103489189 isoform X31.0e-13081.52Show/hide
Query:  MRGNRIAHTLLHRARIAAVSSSLSSVRAPSSIVFGSEATSSQSACSSSSRRDHAFAFSPAAALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETTDGWEE
        MRGN+IA TLL R+RI AVSS LSS+ APSS VF SEAT  Q+ CSS S RDHAF FSPA  LRL +T+SSKDF+DEVKE NPLQYGR++  ETTDGWEE
Subjt:  MRGNRIAHTLLHRARIAAVSSSLSSVRAPSSIVFGSEATSSQSACSSSSRRDHAFAFSPAAALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETTDGWEE

Query:  -DDDLEPELGDGGGGGGIVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRG------------LGCPGLEELESYSQEYKKRLDETGALGKIPDDL
         DDDLEPELGDGG GGG+VLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFK TPRG             GCP +EEL+SYS+EYKKRLDETGALG IPDDL
Subjt:  -DDDLEPELGDGGGGGGIVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRG------------LGCPGLEELESYSQEYKKRLDETGALGKIPDDL

Query:  ALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRGTENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLNRKQKEWRLKLPYENHKKVFLY
        ALEVSSPGAERLLKVPDDL RFKA PMRVSYIED+DSRG+ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPL RKQKEWRLKLPY NHKKVFLY
Subjt:  ALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRGTENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLNRKQKEWRLKLPYENHKKVFLY

Query:  LEC
        LEC
Subjt:  LEC

A0A5D3CAZ4 F4N2.17, putative isoform 17.5e-12983.85Show/hide
Query:  MRGNRIAHTLLHRARIAAVSSSLSSVRAPSSIVFGSEATSSQSACSSSSRRDHAFAFSPAAALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETTDGWEE
        MRGN+IA TLL R+RI AVSS LSS+ APSS VF SEAT  Q+ CSS S RDHAF FSPA  LRL +T+SSKDF+DEVKE NPLQYGR++  ETTDGWEE
Subjt:  MRGNRIAHTLLHRARIAAVSSSLSSVRAPSSIVFGSEATSSQSACSSSSRRDHAFAFSPAAALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETTDGWEE

Query:  -DDDLEPELGDGGGGGGIVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGLGCPGLEELESYSQEYKKRLDETGALGKIPDDLALEVSSPGAERL
         DDDLEPELGDGG GGG+VLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFK TPR     G+EEL+SYS+EYKKRLDETGALG IPDDLALEVSSPGAERL
Subjt:  -DDDLEPELGDGGGGGGIVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGLGCPGLEELESYSQEYKKRLDETGALGKIPDDLALEVSSPGAERL

Query:  LKVPDDLFRFKAMPMRVSYIEDLDSRGTENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLNRKQKEWRLKLPYENHKKVFLYLEC
        LKVPDDL RFKA PMRVSYIED+DSRG+ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPL RKQKEWRLKLPY NHKKVFLYLEC
Subjt:  LKVPDDLFRFKAMPMRVSYIEDLDSRGTENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLNRKQKEWRLKLPYENHKKVFLYLEC

A0A6J1FZQ6 uncharacterized protein LOC1114493657.5e-12979.41Show/hide
Query:  MRGNRIAHTLLHRARIAAVSSSLSSVRAPSSIVFGSEATSSQSACSSSS-----RRDHAFAFSPAAALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETT
        M G+RIA TLLHRAR  A  SS SS   PSSIVFG++A SSQS+CSSSS     RR+HAFAFSP+  +RL NTN SK+F+DEVKEHNPLQYGRDEGEETT
Subjt:  MRGNRIAHTLLHRARIAAVSSSLSSVRAPSSIVFGSEATSSQSACSSSS-----RRDHAFAFSPAAALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETT

Query:  DGWEEDDDLEPELGDGGGGGGIVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRG------------LGCPGLEELESYSQEYKKRLDETGALGKI
        DGWEEDDDLEPELGDGGGGGG+VLQGVPWGE VL LA EVLLQFGDDI LYSFK T RG             GCP LEELESYSQEYKKRLDETGALG I
Subjt:  DGWEEDDDLEPELGDGGGGGGIVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRG------------LGCPGLEELESYSQEYKKRLDETGALGKI

Query:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRGTENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLNRKQKEWRLKLPYENHKK
        PDDLALEVSSPGAERLLKVPDDLFRFKAMPMRV YIED +SRGTENDGVFM+DHV+LESESC+WKLANV+ENRDPLSKGRPL RKQK+WRLK+P+ NHKK
Subjt:  PDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRGTENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLNRKQKEWRLKLPYENHKK

Query:  VFLYLE
        VFLYLE
Subjt:  VFLYLE

SwissProt top hitse value%identityAlignment
B0SH16 Ribosome maturation factor RimP2.5e-0439.34Show/hide
Query:  GCPGLEELESYSQEYKKRLDETGALGKIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRV
        G   LE+ E+ S+  K+ LD+ G       D  L+VSS GAER+L++P+DL RF+ + +++
Subjt:  GCPGLEELESYSQEYKKRLDETGALGKIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRV

Q04U33 Ribosome maturation factor RimP1.1e-0432.11Show/hide
Query:  IKLYSFKVTPR---------------GLGCPGLEELESYSQEYKKRLDETGALGKIPD-DLALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRG
        +KLYS KV  R                 G   L E E  S++ K+ L+        PD D  L+VSS GAER L +P+D+ RF+ +P+R+ +      + 
Subjt:  IKLYSFKVTPR---------------GLGCPGLEELESYSQEYKKRLDETGALGKIPD-DLALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRG

Query:  TENDGVFML
         E  G+F +
Subjt:  TENDGVFML

Q04ZJ3 Ribosome maturation factor RimP1.1e-0432.11Show/hide
Query:  IKLYSFKVTPR---------------GLGCPGLEELESYSQEYKKRLDETGALGKIPD-DLALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRG
        +KLYS KV  R                 G   L E E  S++ K+ L+        PD D  L+VSS GAER L +P+D+ RF+ +P+R+ +      + 
Subjt:  IKLYSFKVTPR---------------GLGCPGLEELESYSQEYKKRLDETGALGKIPD-DLALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRG

Query:  TENDGVFML
         E  G+F +
Subjt:  TENDGVFML

Q72NX1 Ribosome maturation factor RimP5.0e-0533.64Show/hide
Query:  IKLYSFKVTPR---------------GLGCPGLEELESYSQEYKKRLDETGALGKIPD-DLALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRG
        +KLYS KV  R                 G   L E E  S++ K+ L+        PD D  L+VSS GAER L +P DL RF+ +P+R+ +  +   + 
Subjt:  IKLYSFKVTPR---------------GLGCPGLEELESYSQEYKKRLDETGALGKIPD-DLALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRG

Query:  TENDGVF
         E +G+F
Subjt:  TENDGVF

Q8F7K3 Ribosome maturation factor RimP5.0e-0533.64Show/hide
Query:  IKLYSFKVTPR---------------GLGCPGLEELESYSQEYKKRLDETGALGKIPD-DLALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRG
        +KLYS KV  R                 G   L E E  S++ K+ L+        PD D  L+VSS GAER L +P DL RF+ +P+R+ +  +   + 
Subjt:  IKLYSFKVTPR---------------GLGCPGLEELESYSQEYKKRLDETGALGKIPD-DLALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRG

Query:  TENDGVF
         E +G+F
Subjt:  TENDGVF

Arabidopsis top hitse value%identityAlignment
AT1G69210.1 Uncharacterised protein family UPF00902.9e-6450.94Show/hide
Query:  TSSQSACSSSSRRDHAFAFSPAAALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETTDGWE--EDDDLEPELGDGGGGGGIVLQGVPWGEHVLLLAQEVL
        +SS S  SSSS        SP+ + R   T  S        E +  +Y   +  E  + WE  ED+D+E +LGDGG GGGIVL+GV WGE VL +A +VL
Subjt:  TSSQSACSSSSRRDHAFAFSPAAALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETTDGWE--EDDDLEPELGDGGGGGGIVLQGVPWGEHVLLLAQEVL

Query:  LQFGDDIKLYSFKVTPRG------------LGCPGLEELESYSQEYKKRLDETGALGKIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDS
         Q   D++L++FK +PRG             GCP ++ELE +S+E+KKRLD+ GA   IP+DLALEVSSPGAERLL+VP+DL RFK MPM VSY+E+ +S
Subjt:  LQFGDDIKLYSFKVTPRG------------LGCPGLEELESYSQEYKKRLDETGALGKIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDS

Query:  RGTENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLNRKQKEWRLKLPYENHKKVFLYLE
        R     GVF+L+ ++ ES++C+WKLA+VRENRDP SKGRPL+RKQK+ R+ LP+ +HKK+ LYL+
Subjt:  RGTENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLNRKQKEWRLKLPYENHKKVFLYLE

AT1G69210.2 Uncharacterised protein family UPF00905.9e-2543.71Show/hide
Query:  TSSQSACSSSSRRDHAFAFSPAAALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETTDGWE--EDDDLEPELGDGGGGGGIVLQGVPWGEHVLLLAQEVL
        +SS S  SSSS        SP+ + R   T  S        E +  +Y   +  E  + WE  ED+D+E +LGDGG GGGIVL+GV WGE VL +A +VL
Subjt:  TSSQSACSSSSRRDHAFAFSPAAALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETTDGWE--EDDDLEPELGDGGGGGGIVLQGVPWGEHVLLLAQEVL

Query:  LQFGDDIKLYSFKVTPRG------------LGCPGLEELESYSQEYKKRLDETGALGKIPDDLALEV
         Q   D++L++FK +PRG             GCP ++ELE +S+E+KKRLD+ GA   IP+DLALEV
Subjt:  LQFGDDIKLYSFKVTPRG------------LGCPGLEELESYSQEYKKRLDETGALGKIPDDLALEV

AT1G77122.1 Uncharacterised protein family UPF00902.2e-4040.17Show/hide
Query:  DEVKEHNPLQYGRDEGEETTDGWEEDDDLEPEL--GDGGGGGGIVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRG------------LGCPGLE
        +E++E+       DE +E  D   E D+ E EL  GDGGGGGGI L G  W +  L LA +V   F  D+ +Y+FK  P               G P +E
Subjt:  DEVKEHNPLQYGRDEGEETTDGWEEDDDLEPEL--GDGGGGGGIVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRG------------LGCPGLE

Query:  ELESYSQEYKKRLDETGALGKIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRGTENDGVFMLDHVELESESCIWKLANVRENRDPLSK
        ++E++S  Y+ +L E      IPD+++LEVSSPG ER++++P DL R+K  PM V Y    +   TE DG+F L   ++E++ CIW +A++R NR+   K
Subjt:  ELESYSQEYKKRLDETGALGKIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRGTENDGVFMLDHVELESESCIWKLANVRENRDPLSK

Query:  GRPLNRKQKEWRLKLPYENHKKVFLYLEC
        GRPL++KQ+EWRL+  +E+ + V L+ EC
Subjt:  GRPLNRKQKEWRLKLPYENHKKVFLYLEC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTGGTAACAGGATTGCTCATACTTTGCTCCATCGAGCTCGAATCGCCGCCGTTTCATCTTCACTCTCCTCCGTCAGAGCACCGTCTTCCATAGTCTTTGGCTCCGA
AGCAACGTCTTCTCAAAGTGCTTGCTCCTCTTCCTCCCGTCGCGACCACGCATTCGCCTTTTCCCCCGCAGCAGCCCTGCGGTTACTCAATACCAATTCCTCTAAAGACT
TTCAAGATGAAGTGAAAGAACATAATCCACTCCAGTATGGGAGGGATGAAGGGGAAGAAACCACAGATGGATGGGAAGAAGACGATGATCTGGAGCCTGAGCTTGGTGAT
GGAGGGGGAGGTGGTGGTATTGTTTTGCAAGGCGTGCCATGGGGTGAACATGTTCTTCTTCTTGCTCAAGAGGTCCTGCTGCAATTTGGCGATGACATAAAACTCTATTC
TTTCAAGGTCACTCCACGTGGACTTGGTTGTCCCGGCCTGGAGGAGCTTGAAAGTTATAGCCAAGAGTACAAAAAACGATTAGATGAAACTGGAGCACTTGGAAAGATTC
CCGATGATTTAGCTCTTGAGGTATCATCTCCAGGTGCAGAGAGATTACTGAAGGTCCCAGATGATCTGTTTAGATTTAAAGCCATGCCAATGCGAGTTTCCTACATTGAA
GATTTAGACTCGAGAGGCACTGAAAATGATGGAGTTTTTATGCTGGATCATGTAGAATTGGAATCTGAGAGCTGTATCTGGAAATTGGCAAATGTGAGGGAAAACCGAGA
TCCTTTAAGTAAGGGTAGGCCTTTAAATCGTAAGCAGAAAGAATGGAGGTTAAAGTTACCGTACGAAAATCATAAGAAGGTATTCCTTTACCTTGAATGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGTGGTAACAGGATTGCTCATACTTTGCTCCATCGAGCTCGAATCGCCGCCGTTTCATCTTCACTCTCCTCCGTCAGAGCACCGTCTTCCATAGTCTTTGGCTCCGA
AGCAACGTCTTCTCAAAGTGCTTGCTCCTCTTCCTCCCGTCGCGACCACGCATTCGCCTTTTCCCCCGCAGCAGCCCTGCGGTTACTCAATACCAATTCCTCTAAAGACT
TTCAAGATGAAGTGAAAGAACATAATCCACTCCAGTATGGGAGGGATGAAGGGGAAGAAACCACAGATGGATGGGAAGAAGACGATGATCTGGAGCCTGAGCTTGGTGAT
GGAGGGGGAGGTGGTGGTATTGTTTTGCAAGGCGTGCCATGGGGTGAACATGTTCTTCTTCTTGCTCAAGAGGTCCTGCTGCAATTTGGCGATGACATAAAACTCTATTC
TTTCAAGGTCACTCCACGTGGACTTGGTTGTCCCGGCCTGGAGGAGCTTGAAAGTTATAGCCAAGAGTACAAAAAACGATTAGATGAAACTGGAGCACTTGGAAAGATTC
CCGATGATTTAGCTCTTGAGGTATCATCTCCAGGTGCAGAGAGATTACTGAAGGTCCCAGATGATCTGTTTAGATTTAAAGCCATGCCAATGCGAGTTTCCTACATTGAA
GATTTAGACTCGAGAGGCACTGAAAATGATGGAGTTTTTATGCTGGATCATGTAGAATTGGAATCTGAGAGCTGTATCTGGAAATTGGCAAATGTGAGGGAAAACCGAGA
TCCTTTAAGTAAGGGTAGGCCTTTAAATCGTAAGCAGAAAGAATGGAGGTTAAAGTTACCGTACGAAAATCATAAGAAGGTATTCCTTTACCTTGAATGCTGA
Protein sequenceShow/hide protein sequence
MRGNRIAHTLLHRARIAAVSSSLSSVRAPSSIVFGSEATSSQSACSSSSRRDHAFAFSPAAALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETTDGWEEDDDLEPELGD
GGGGGGIVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGLGCPGLEELESYSQEYKKRLDETGALGKIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIE
DLDSRGTENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLNRKQKEWRLKLPYENHKKVFLYLEC