; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G003730 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G003730
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 9-like
Genome locationchr04:3713190..3713546
RNA-Seq ExpressionLsi04G003730
SyntenyLsi04G003730
Gene Ontology termsGO:0005615 - extracellular space (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039618 - CLAVATA3/ESR (CLE)-related protein 9/10/11/12/13


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034462.1 inactive protein FON2 SPARE1-like [Cucumis melo var. makuwa]3.3e-3780.67Show/hide
Query:  MKASLSLSSSSSLSFATNGQLF-MMILIVLLVFVTSSTSTAVTDASRHQPPRREVLQLHPCDALTHENSRSLCIHLHRVYQHRLPVVHVPPPLLTRNEID
        MKAS SLSSSSS SF+  G LF M+ILIVLL+FVTSSTSTAV DAS         LQLHPCDALTHE SRSLCIHLHRVYQHRLP VHV PPLLT NEID
Subjt:  MKASLSLSSSSSLSFATNGQLF-MMILIVLLVFVTSSTSTAVTDASRHQPPRREVLQLHPCDALTHENSRSLCIHLHRVYQHRLPVVHVPPPLLTRNEID

Query:  PRYGVEKRLVPSGPNPLHN
        PRYGVEKRLVPSGPNPLHN
Subjt:  PRYGVEKRLVPSGPNPLHN

KAG6574051.1 CLAVATA3/ESR (CLE)-related protein 10, partial [Cucurbita argyrosperma subsp. sororia]2.4e-3570.9Show/hide
Query:  MKASLSLSSSSSLSFATNGQLFMMILIVLLVFVTSST---------STAVTDAS----RHQPPRREVLQLHPCDALTHENSRSLCIHLHRVYQHRLPVVH
        MKASLS SS    SFATNGQL MMILIVL +FV+SST         ST V +AS    RH PPR +  QLHPCDALT ENSRSLCIHLHRVYQHRLP V+
Subjt:  MKASLSLSSSSSLSFATNGQLFMMILIVLLVFVTSST---------STAVTDAS----RHQPPRREVLQLHPCDALTHENSRSLCIHLHRVYQHRLPVVH

Query:  VPP---PLLTRNEIDPRYGVEKRLVPSGPNPLHN
        +PP   PLLT N+IDPRYGVEKRLVPSGPNPLHN
Subjt:  VPP---PLLTRNEIDPRYGVEKRLVPSGPNPLHN

KAG7032247.1 CLAVATA3/ESR (CLE)-related protein 10, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-3268.46Show/hide
Query:  MKASLSLSSSSSLSFATNGQLFMMILIVLLVFVTSST--------STAVTDA----SRHQPPRREVLQLHPCDALTHENSRSLCIHLHRVYQHRLPVVHV
        MKASLS  +SSS   ATN QLFMMI ++LLVFV SS         ST + DA    S H  P RE+ QLHPCDALTHENSRSLCIHL+RVYQH LP VHV
Subjt:  MKASLSLSSSSSLSFATNGQLFMMILIVLLVFVTSST--------STAVTDA----SRHQPPRREVLQLHPCDALTHENSRSLCIHLHRVYQHRLPVVHV

Query:  PPPLLTRNEIDPRYGVEKRLVPSGPNPLHN
         P +LT N IDPRYGVEKRLVPSGPNPLHN
Subjt:  PPPLLTRNEIDPRYGVEKRLVPSGPNPLHN

KGN51967.1 hypothetical protein Csa_008419 [Cucumis sativus]2.8e-3678.99Show/hide
Query:  MKASLSLSSSSSLSFATNGQLF-MMILIVLLVFVTSSTSTAVTDASRHQPPRREVLQLHPCDALTHENSRSLCIHLHRVYQHRLPVVHVPPPLLTRNEID
        MKAS SLSSSSS SF+  G LF M+ILIVLL+FVTSS+STA+ DAS         LQLHPCDALTHE SRSLCIHLH VYQHRLP VHV PPLLTRNEID
Subjt:  MKASLSLSSSSSLSFATNGQLF-MMILIVLLVFVTSSTSTAVTDASRHQPPRREVLQLHPCDALTHENSRSLCIHLHRVYQHRLPVVHVPPPLLTRNEID

Query:  PRYGVEKRLVPSGPNPLHN
        PRYGVEKRLVPSGPNPLHN
Subjt:  PRYGVEKRLVPSGPNPLHN

XP_038891849.1 CLAVATA3/ESR (CLE)-related protein 10-like [Benincasa hispida]3.7e-4483.61Show/hide
Query:  MKASLSLSSSSSLSFATNGQLFMMILIVLLVFVTSSTSTAVTDA----SRHQPPRREVLQLHPCDALTHENSRSLCIHLHRVYQHRLPVVHVPPPLLTRN
        MKAS  LSSSS  SF+TNG LFMMILIVLLVFVTSS S AV +A    S HQPPR EVLQLHPCDALT ENSRSLCIHLHRVYQHRLP VHV PPLLT N
Subjt:  MKASLSLSSSSSLSFATNGQLFMMILIVLLVFVTSSTSTAVTDA----SRHQPPRREVLQLHPCDALTHENSRSLCIHLHRVYQHRLPVVHVPPPLLTRN

Query:  EIDPRYGVEKRLVPSGPNPLHN
        EIDPRYGVEKRLVPSGPNPLHN
Subjt:  EIDPRYGVEKRLVPSGPNPLHN

TrEMBL top hitse value%identityAlignment
A0A0A0KU71 Uncharacterized protein1.4e-3678.99Show/hide
Query:  MKASLSLSSSSSLSFATNGQLF-MMILIVLLVFVTSSTSTAVTDASRHQPPRREVLQLHPCDALTHENSRSLCIHLHRVYQHRLPVVHVPPPLLTRNEID
        MKAS SLSSSSS SF+  G LF M+ILIVLL+FVTSS+STA+ DAS         LQLHPCDALTHE SRSLCIHLH VYQHRLP VHV PPLLTRNEID
Subjt:  MKASLSLSSSSSLSFATNGQLF-MMILIVLLVFVTSSTSTAVTDASRHQPPRREVLQLHPCDALTHENSRSLCIHLHRVYQHRLPVVHVPPPLLTRNEID

Query:  PRYGVEKRLVPSGPNPLHN
        PRYGVEKRLVPSGPNPLHN
Subjt:  PRYGVEKRLVPSGPNPLHN

A0A5A7STL1 Inactive protein FON2 SPARE1-like1.6e-3780.67Show/hide
Query:  MKASLSLSSSSSLSFATNGQLF-MMILIVLLVFVTSSTSTAVTDASRHQPPRREVLQLHPCDALTHENSRSLCIHLHRVYQHRLPVVHVPPPLLTRNEID
        MKAS SLSSSSS SF+  G LF M+ILIVLL+FVTSSTSTAV DAS         LQLHPCDALTHE SRSLCIHLHRVYQHRLP VHV PPLLT NEID
Subjt:  MKASLSLSSSSSLSFATNGQLF-MMILIVLLVFVTSSTSTAVTDASRHQPPRREVLQLHPCDALTHENSRSLCIHLHRVYQHRLPVVHVPPPLLTRNEID

Query:  PRYGVEKRLVPSGPNPLHN
        PRYGVEKRLVPSGPNPLHN
Subjt:  PRYGVEKRLVPSGPNPLHN

A0A6J1D4I0 CLAVATA3/ESR (CLE)-related protein 9-like2.0e-3270.8Show/hide
Query:  MMILIVLLVFVTSS----------TSTAVTDAS-------RHQPPRREVLQLHPCDALTHENSRSLCIHLHRVYQHRLPVVHVPPPLLTRNEIDPRYGVE
        M+I I+LLVFVTSS          +STA+ DAS       RHQPPR E  QLHPCDA+T  NSRSLCIHLHRVY HRLPVVHVPP LLT NEIDP+YGVE
Subjt:  MMILIVLLVFVTSS----------TSTAVTDAS-------RHQPPRREVLQLHPCDALTHENSRSLCIHLHRVYQHRLPVVHVPPPLLTRNEIDPRYGVE

Query:  KRLVPSGPNPLHN
        KRLVPSGPNPLHN
Subjt:  KRLVPSGPNPLHN

A0A6P4AZV6 CLAVATA3/ESR (CLE)-related protein 92.3e-1548.33Show/hide
Query:  SSSSSLSFATNGQLFMMILIVLLVF------VTSSTSTAVTDASRHQPPRREVLQLHPCDALTHENSRSLCIHLHRVYQHRLPVVHVPPP---LLTRNEI
        S SS+ S A   +L   I+ VLL+F       T+ +   +T +SR+   R +  +LHPCD+L HE SRSLC    R++Q+R   V  PPP       +EI
Subjt:  SSSSSLSFATNGQLFMMILIVLLVF------VTSSTSTAVTDASRHQPPRREVLQLHPCDALTHENSRSLCIHLHRVYQHRLPVVHVPPP---LLTRNEI

Query:  DPRYGVEKRLVPSGPNPLHN
        DPRYGVEKRLVPSGPNPLHN
Subjt:  DPRYGVEKRLVPSGPNPLHN

A0A7N2LAQ0 Uncharacterized protein3.0e-1546.4Show/hide
Query:  MKASLSLSSSSSLSFATNGQLFMMILIVLLVFVTSS------TSTAVTDASRHQPPRREVL-QLHPCDALTHENSRSLCIHLHRVYQHRLPVVHVPPPLL
        MK+S S ++SS   F    +L ++I+IV L+FVTS+      T    +  + H   R  +  ++H C +L+HE SRSLCI L R   H+   +  PPP  
Subjt:  MKASLSLSSSSSLSFATNGQLFMMILIVLLVFVTSS------TSTAVTDASRHQPPRREVL-QLHPCDALTHENSRSLCIHLHRVYQHRLPVVHVPPPLL

Query:  TRNEIDPRYGVEKRLVPSGPNPLHN
          +EIDPRYGVEKRLVPSGPNPLHN
Subjt:  TRNEIDPRYGVEKRLVPSGPNPLHN

SwissProt top hitse value%identityAlignment
A2X462 Protein FON2 SPARE13.9e-0433.68Show/hide
Query:  ILIVLLVFVTSSTSTAVTDASRHQPPRREVLQLHPCDALTHENSRSLCIHLHRVYQHRLPVVHVPPPLL-TRNEIDPRYGVEKRLVPSGPNPLHN
        +L+ +  F  +S+ +++T   RH                 H + R    H HR +  R     VPP       E+DPR+GV+KRLVP+GPNPLH+
Subjt:  ILIVLLVFVTSSTSTAVTDASRHQPPRREVLQLHPCDALTHENSRSLCIHLHRVYQHRLPVVHVPPPLL-TRNEIDPRYGVEKRLVPSGPNPLHN

Q29PU4 CLAVATA3/ESR (CLE)-related protein 127.8e-0586.96Show/hide
Query:  NEIDPRYGVEKRLVPSGPNPLHN
        +EIDPRYGVEKR VPSGPNPLH+
Subjt:  NEIDPRYGVEKRLVPSGPNPLHN

Q4PSX1 CLAVATA3/ESR (CLE)-related protein 104.3e-1139.05Show/hide
Query:  NGQLFMMILIVLLVFVTSSTSTAVTDASRHQPPRREVLQLHP---CDALTHENSRSLCIHLHRVYQ-HRLPVVHVPPPLLTRNEIDPRYGVEKRLVPSGP
        N  + ++I+  LL    ++T        R  P  +     +P   C++ +   +RS+CI L R+++  R P+   PPP     EID RYGVEKRLVPSGP
Subjt:  NGQLFMMILIVLLVFVTSSTSTAVTDASRHQPPRREVLQLHP---CDALTHENSRSLCIHLHRVYQ-HRLPVVHVPPPLLTRNEIDPRYGVEKRLVPSGP

Query:  NPLHN
        NPLHN
Subjt:  NPLHN

Q6NMF0 CLAVATA3/ESR (CLE)-related protein 131.6e-0591.3Show/hide
Query:  NEIDPRYGVEKRLVPSGPNPLHN
        +EIDPRYGVEKRLVPSGPNPLH+
Subjt:  NEIDPRYGVEKRLVPSGPNPLHN

Q9FZE4 CLAVATA3/ESR (CLE)-related protein 94.3e-1136.75Show/hide
Query:  LFMMILIVLLVFVTSSTSTAVTDASR-----------------HQPPRREVLQLHPCDALTHENSRSLCIHLHRVYQ--HRLPVVHVPPPLLTRNEIDPR
        L  ++ + LL+  ++++ST V + +R                 H P    V     CD+     +RS+CI L R+++   + P++  PPP     EIDPR
Subjt:  LFMMILIVLLVFVTSSTSTAVTDASR-----------------HQPPRREVLQLHPCDALTHENSRSLCIHLHRVYQ--HRLPVVHVPPPLLTRNEIDPR

Query:  YGVEKRLVPSGPNPLHN
        YGV+KRLVPSGPNPLHN
Subjt:  YGVEKRLVPSGPNPLHN

Arabidopsis top hitse value%identityAlignment
AT1G26600.1 CLAVATA3/ESR-RELATED 93.0e-1236.75Show/hide
Query:  LFMMILIVLLVFVTSSTSTAVTDASR-----------------HQPPRREVLQLHPCDALTHENSRSLCIHLHRVYQ--HRLPVVHVPPPLLTRNEIDPR
        L  ++ + LL+  ++++ST V + +R                 H P    V     CD+     +RS+CI L R+++   + P++  PPP     EIDPR
Subjt:  LFMMILIVLLVFVTSSTSTAVTDASR-----------------HQPPRREVLQLHPCDALTHENSRSLCIHLHRVYQ--HRLPVVHVPPPLLTRNEIDPR

Query:  YGVEKRLVPSGPNPLHN
        YGV+KRLVPSGPNPLHN
Subjt:  YGVEKRLVPSGPNPLHN

AT1G68795.1 CLAVATA3/ESR-RELATED 125.5e-0686.96Show/hide
Query:  NEIDPRYGVEKRLVPSGPNPLHN
        +EIDPRYGVEKR VPSGPNPLH+
Subjt:  NEIDPRYGVEKRLVPSGPNPLHN

AT1G69320.1 CLAVATA3/ESR-RELATED 103.0e-1239.05Show/hide
Query:  NGQLFMMILIVLLVFVTSSTSTAVTDASRHQPPRREVLQLHP---CDALTHENSRSLCIHLHRVYQ-HRLPVVHVPPPLLTRNEIDPRYGVEKRLVPSGP
        N  + ++I+  LL    ++T        R  P  +     +P   C++ +   +RS+CI L R+++  R P+   PPP     EID RYGVEKRLVPSGP
Subjt:  NGQLFMMILIVLLVFVTSSTSTAVTDASRHQPPRREVLQLHP---CDALTHENSRSLCIHLHRVYQ-HRLPVVHVPPPLLTRNEIDPRYGVEKRLVPSGP

Query:  NPLHN
        NPLHN
Subjt:  NPLHN

AT1G73965.1 CLAVATA3/ESR-RELATED 131.1e-0691.3Show/hide
Query:  NEIDPRYGVEKRLVPSGPNPLHN
        +EIDPRYGVEKRLVPSGPNPLH+
Subjt:  NEIDPRYGVEKRLVPSGPNPLHN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCCTCTCTCTCTCTTTCTTCGTCGTCTTCGTTATCTTTTGCCACCAACGGCCAGCTTTTCATGATGATCTTGATAGTTCTACTCGTCTTCGTCACCTCATCCAC
TTCCACCGCCGTGACAGATGCTTCTCGCCACCAACCGCCTCGCCGTGAAGTACTGCAGCTTCATCCTTGTGATGCTCTCACCCATGAAAACTCACGTTCTTTGTGTATTC
ACCTTCATAGAGTTTACCAACACCGCCTACCCGTTGTTCATGTCCCGCCGCCGTTGCTGACACGCAATGAGATTGATCCCCGATATGGCGTTGAGAAGAGACTCGTGCCA
TCGGGGCCAAACCCTCTTCACAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCCTCTCTCTCTCTTTCTTCGTCGTCTTCGTTATCTTTTGCCACCAACGGCCAGCTTTTCATGATGATCTTGATAGTTCTACTCGTCTTCGTCACCTCATCCAC
TTCCACCGCCGTGACAGATGCTTCTCGCCACCAACCGCCTCGCCGTGAAGTACTGCAGCTTCATCCTTGTGATGCTCTCACCCATGAAAACTCACGTTCTTTGTGTATTC
ACCTTCATAGAGTTTACCAACACCGCCTACCCGTTGTTCATGTCCCGCCGCCGTTGCTGACACGCAATGAGATTGATCCCCGATATGGCGTTGAGAAGAGACTCGTGCCA
TCGGGGCCAAACCCTCTTCACAACTGA
Protein sequenceShow/hide protein sequence
MKASLSLSSSSSLSFATNGQLFMMILIVLLVFVTSSTSTAVTDASRHQPPRREVLQLHPCDALTHENSRSLCIHLHRVYQHRLPVVHVPPPLLTRNEIDPRYGVEKRLVP
SGPNPLHN