CuGenDBv2

Gene ID	Lsi04G003830
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Protein of unknown function, DUF538
Genome location	chr04:3789205..3789802
RNA-Seq Expression	Lsi04G003830
Synteny	Lsi04G003830
Gene Ontology terms	NA
InterPro domains	IPR007493 - Protein of unknown function DUF538 IPR036758 - At5g01610-like superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004135158.1 uncharacterized protein At5g01610 [Cucumis sativus]

9.5e-61

95.24

Show/hide

Query:  GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDESTSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWVKVTSVSVEGYKSDKVW
        GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDES S+LIVYLPS CEISFKDSSVVRYATRVKGTLQRGKLT+IEGMKTKVLVWVKVTSVSVEGYKSDKVW
Subjt:  GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDESTSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWVKVTSVSVEGYKSDKVW

Query:  FTAGVKKSRSKDAYEKPHDAVRVEEF
        FTAGVKKSRSKDAYEKPHDA+RV EF
Subjt:  FTAGVKKSRSKDAYEKPHDAVRVEEF

XP_008446410.1 PREDICTED: uncharacterized protein At5g01610-like isoform X1 [Cucumis melo]

9.5e-61

95.24

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Query:  GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDESTSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWVKVTSVSVEGYKSDKVW
        GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDES S+LIVYLPS CEISFKDSSVVRYATRVKGTLQRGKLT+IEGMKTKVLVWVKVTSVSVEGYKSDKVW
Subjt:  GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDESTSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWVKVTSVSVEGYKSDKVW

Query:  FTAGVKKSRSKDAYEKPHDAVRVEEF
        FTAGVKKSRSKDAYEKPHDA+RV EF
Subjt:  FTAGVKKSRSKDAYEKPHDAVRVEEF

XP_008446412.1 PREDICTED: uncharacterized protein At5g01610-like isoform X2 [Cucumis melo]

9.5e-61

95.24

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Query:  GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDESTSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWVKVTSVSVEGYKSDKVW
        GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDES S+LIVYLPS CEISFKDSSVVRYATRVKGTLQRGKLT+IEGMKTKVLVWVKVTSVSVEGYKSDKVW
Subjt:  GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDESTSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWVKVTSVSVEGYKSDKVW

Query:  FTAGVKKSRSKDAYEKPHDAVRVEEF
        FTAGVKKSRSKDAYEKPHDA+RV EF
Subjt:  FTAGVKKSRSKDAYEKPHDAVRVEEF

XP_023543022.1 uncharacterized protein At5g01610-like [Cucurbita pepo subsp. pepo]

4.0e-59

92.86

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Query:  GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDESTSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWVKVTSVSVEGYKSDKVW
        GKPLKSLPDLLREYNLPPGLFPQN+TCYEFDES S+LIVYLPSVCEISFKDSSV+RYATRVKGTLQRGKLT IEGMKTKVLVWVKVTSV+VEGYKSDKVW
Subjt:  GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDESTSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWVKVTSVSVEGYKSDKVW

Query:  FTAGVKKSRSKDAYEKPHDAVRVEEF
        FTAGVKKSRSKDAY+KP DAVRVE F
Subjt:  FTAGVKKSRSKDAYEKPHDAVRVEEF

XP_038891837.1 uncharacterized protein At5g01610 [Benincasa hispida]

1.6e-60

95.24

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Query:  GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDESTSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWVKVTSVSVEGYKSDKVW
        GKPLKSLP+LLREYNLPPGLFPQNMTCYEFDES S+LIVYLPS CEISFKDSSVVRYATRVK TLQRGKLTSIEGMKTKVLVWVKVTSVSVEGYKSDKVW
Subjt:  GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDESTSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWVKVTSVSVEGYKSDKVW

Query:  FTAGVKKSRSKDAYEKPHDAVRVEEF
        FTAGVKKSRSKDAYEKPHDAVRVE+F
Subjt:  FTAGVKKSRSKDAYEKPHDAVRVEEF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KSU5 Uncharacterized protein

4.6e-61

95.24

Show/hide

Query:  GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDESTSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWVKVTSVSVEGYKSDKVW
        GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDES S+LIVYLPS CEISFKDSSVVRYATRVKGTLQRGKLT+IEGMKTKVLVWVKVTSVSVEGYKSDKVW
Subjt:  GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDESTSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWVKVTSVSVEGYKSDKVW

Query:  FTAGVKKSRSKDAYEKPHDAVRVEEF
        FTAGVKKSRSKDAYEKPHDA+RV EF
Subjt:  FTAGVKKSRSKDAYEKPHDAVRVEEF

A0A1S3BF00 uncharacterized protein At5g01610-like isoform X1

4.6e-61

95.24

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Query:  GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDESTSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWVKVTSVSVEGYKSDKVW
        GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDES S+LIVYLPS CEISFKDSSVVRYATRVKGTLQRGKLT+IEGMKTKVLVWVKVTSVSVEGYKSDKVW
Subjt:  GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDESTSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWVKVTSVSVEGYKSDKVW

Query:  FTAGVKKSRSKDAYEKPHDAVRVEEF
        FTAGVKKSRSKDAYEKPHDA+RV EF
Subjt:  FTAGVKKSRSKDAYEKPHDAVRVEEF

A0A1S3BFP4 uncharacterized protein At5g01610-like isoform X2

4.6e-61

95.24

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Query:  GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDESTSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWVKVTSVSVEGYKSDKVW
        GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDES S+LIVYLPS CEISFKDSSVVRYATRVKGTLQRGKLT+IEGMKTKVLVWVKVTSVSVEGYKSDKVW
Subjt:  GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDESTSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWVKVTSVSVEGYKSDKVW

Query:  FTAGVKKSRSKDAYEKPHDAVRVEEF
        FTAGVKKSRSKDAYEKPHDA+RV EF
Subjt:  FTAGVKKSRSKDAYEKPHDAVRVEEF

A0A5A7STB8 Uncharacterized protein

4.6e-61

95.24

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Query:  GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDESTSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWVKVTSVSVEGYKSDKVW
        GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDES S+LIVYLPS CEISFKDSSVVRYATRVKGTLQRGKLT+IEGMKTKVLVWVKVTSVSVEGYKSDKVW
Subjt:  GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDESTSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWVKVTSVSVEGYKSDKVW

Query:  FTAGVKKSRSKDAYEKPHDAVRVEEF
        FTAGVKKSRSKDAYEKPHDA+RV EF
Subjt:  FTAGVKKSRSKDAYEKPHDAVRVEEF

A0A6J1FZA7 uncharacterized protein At5g01610-like

5.6e-59

92.06

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Query:  GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDESTSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWVKVTSVSVEGYKSDKVW
        GKPLKSLPDLLREYNLPPGLFPQN+TCYEFDES S+LIVYLPSVCEISFKDSSV+RYATRVKGTLQRGKLT IEGMKTKVLVWVKVTSV+VEGYKSDKVW
Subjt:  GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDESTSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWVKVTSVSVEGYKSDKVW

Query:  FTAGVKKSRSKDAYEKPHDAVRVEEF
        FTAGVKKSRSKDAY+KP D VRVE F
Subjt:  FTAGVKKSRSKDAYEKPHDAVRVEEF

SwissProt top hits

e value

%identity

Alignment

Q9M015 Uncharacterized protein At5g01610

1.1e-35

56.35

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Query:  GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDESTSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWVKVTSVSVEGYKSDKVW
        GK  K LP+LL+EY+LP G+FP + T YEFDE T +L V +PS+CE+ +KDSSV+++ T V G L++GKLT +EG+KTKV++WVKVTS+S +   + KV+
Subjt:  GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDESTSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWVKVTSVSVEGYKSDKVW

Query:  FTAGVKKSRSKDAYEKPHDAVRVEEF
        FTAG+KKSRS+DAYE   + +RV++F
Subjt:  FTAGVKKSRSKDAYEKPHDAVRVEEF

Arabidopsis top hits

e value

%identity

Alignment

AT2G03350.1 Protein of unknown function, DUF538

1.2e-50

73.98

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Query:  GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDESTSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWVKVTSVSVEGYKSDKVW
        GKPLKSLPDLL+EYNLPPGLFPQN+ CYEFDE+ ++L V+  S CE++FKD S +RYATRVKG L RGKL  +EGMKTKVLVWVKVT++SVE  KSDK+W
Subjt:  GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDESTSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWVKVTSVSVEGYKSDKVW

Query:  FTAGVKKSRSKDAYEKPHDAVRV
        FTAGVKKSRSKD Y+ PHDA++V
Subjt:  FTAGVKKSRSKDAYEKPHDAVRV

AT3G08890.1 Protein of unknown function, DUF538

3.0e-36

55.56

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Query:  GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDESTSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWVKVTSVSVEGYKSDKVW
        GK  K LP+LL+E+ LP G+FP++ T YEF+E T +L V++PS+CE+ +KD+SV+R+ T V G L++GKL  +EGMKTKV++WVKVTS+S +   S KV 
Subjt:  GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDESTSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWVKVTSVSVEGYKSDKVW

Query:  FTAGVKKSRSKDAYEKPHDAVRVEEF
        FTAG+KKSRS+DAYE   D V +++F
Subjt:  FTAGVKKSRSKDAYEKPHDAVRVEEF

AT3G08890.2 Protein of unknown function, DUF538

3.0e-36

55.56

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Query:  GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDESTSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWVKVTSVSVEGYKSDKVW
        GK  K LP+LL+E+ LP G+FP++ T YEF+E T +L V++PS+CE+ +KD+SV+R+ T V G L++GKL  +EGMKTKV++WVKVTS+S +   S KV 
Subjt:  GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDESTSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWVKVTSVSVEGYKSDKVW

Query:  FTAGVKKSRSKDAYEKPHDAVRVEEF
        FTAG+KKSRS+DAYE   D V +++F
Subjt:  FTAGVKKSRSKDAYEKPHDAVRVEEF

AT5G01610.1 Protein of unknown function, DUF538

7.8e-37

56.35

Show/hide

Query:  GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDESTSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWVKVTSVSVEGYKSDKVW
        GK  K LP+LL+EY+LP G+FP + T YEFDE T +L V +PS+CE+ +KDSSV+++ T V G L++GKLT +EG+KTKV++WVKVTS+S +   + KV+
Subjt:  GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDESTSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWVKVTSVSVEGYKSDKVW

Query:  FTAGVKKSRSKDAYEKPHDAVRVEEF
        FTAG+KKSRS+DAYE   + +RV++F
Subjt:  FTAGVKKSRSKDAYEKPHDAVRVEEF

AT5G37070.1 Protein of unknown function, DUF538

2.5e-35

54.76

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Query:  GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDESTSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWVKVTSVSVEGYKSDKVW
        GK  K LP+LL+E+ LP G+FPQ+ T YEF+E T +L V++P  CE+ ++DSSV+R++T V G L++GKL  +EGMKTKV++WVKVT +S +   S KV+
Subjt:  GKPLKSLPDLLREYNLPPGLFPQNMTCYEFDESTSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWVKVTSVSVEGYKSDKVW

Query:  FTAGVKKSRSKDAYEKPHDAVRVEEF
        FTAG+KKSRS+DAYE     V V++F
Subjt:  FTAGVKKSRSKDAYEKPHDAVRVEEF

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAAAGATTTACATGAGCATAATACTGAAGAAAATCACAACCCATCTGAGTATTCAACAAAGCTTTTTCTTCCCACAGGAAAGCCATTGAAGAGCTTGCCGGATTTACT
TCGCGAGTACAACTTACCACCCGGCCTCTTTCCTCAGAACATGACCTGCTATGAATTTGATGAATCTACATCCAGGCTGATTGTCTACTTACCATCCGTTTGTGAGATTA
GCTTCAAGGATTCCTCTGTAGTCAGATATGCAACAAGGGTGAAAGGAACTCTTCAGAGAGGGAAGCTTACAAGCATTGAAGGAATGAAGACAAAAGTCCTTGTGTGGGTG
AAAGTGACAAGCGTGTCGGTTGAGGGCTACAAATCTGATAAGGTCTGGTTCACAGCAGGAGTGAAGAAGTCGAGATCGAAAGATGCATATGAAAAGCCCCATGACGCCGT
TAGGGTAGAAGAATTCTGA

mRNA sequence

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Protein sequence

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MKDLHEHNTEENHNPSEYSTKLFLPTGKPLKSLPDLLREYNLPPGLFPQNMTCYEFDESTSRLIVYLPSVCEISFKDSSVVRYATRVKGTLQRGKLTSIEGMKTKVLVWV
KVTSVSVEGYKSDKVWFTAGVKKSRSKDAYEKPHDAVRVEEF

Lsi04G003830 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome