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Lsi04G004120 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G004120
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr04:4010946..4011387
RNA-Seq ExpressionLsi04G004120
SyntenyLsi04G004120
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034426.1 putative lipoprotein yfhM [Cucumis melo var. makuwa]6.6e-2778.82Show/hide
Query:  MAGQTQQLVMIFLLVSLL-IFFNTVSASRAAIMIHLGQDFPAFHGAHQKNQPLMKLLNGRMDLQYNDYPIFGANPRHTPKPTGKV
        MA QTQ LVM FLL+SLL IFFNTVSASRA  M+HLGQDFPA   A+QKNQP   L NGRMDLQ+NDY IFGANPRHTPKPTGKV
Subjt:  MAGQTQQLVMIFLLVSLL-IFFNTVSASRAAIMIHLGQDFPAFHGAHQKNQPLMKLLNGRMDLQYNDYPIFGANPRHTPKPTGKV

KAG6601439.1 hypothetical protein SDJN03_06672, partial [Cucurbita argyrosperma subsp. sororia]3.3e-1869.33Show/hide
Query:  MIFLLVSLLIFFNTVSASRAAIMIHLGQDFPAFHGAHQKNQPLMKLLNGRMDLQYNDYPIFGANPRHTPKPTGKV
        M+ +L+SLL+     SAS AAIMIHLGQDF A   AHQK QPL KLLN RMDLQYNDYP+  AN RHTPKPTG+V
Subjt:  MIFLLVSLLIFFNTVSASRAAIMIHLGQDFPAFHGAHQKNQPLMKLLNGRMDLQYNDYPIFGANPRHTPKPTGKV

KAG7032221.1 hypothetical protein SDJN02_06264, partial [Cucurbita argyrosperma subsp. argyrosperma]4.2e-2167.86Show/hide
Query:  MAGQTQQLVMIFLLVSLLIFFNTVSASRAAIMIHLGQDFPAFHGAHQKNQPLMKLLNGRMDLQYNDYPIFGANPRHTPKPTGKV
        MAGQTQ  +M+ +L+SLL+     SAS AAIMIHLGQDF A   AHQ  QPL KLLN RMDLQYNDYP+  AN RHTPKPTG+V
Subjt:  MAGQTQQLVMIFLLVSLLIFFNTVSASRAAIMIHLGQDFPAFHGAHQKNQPLMKLLNGRMDLQYNDYPIFGANPRHTPKPTGKV

KGN51928.1 hypothetical protein Csa_009059 [Cucumis sativus]1.3e-2780Show/hide
Query:  MAGQTQQLVMIFLLVSLL-IFFNTVSASRAAIMIHLGQDFPAFHGAHQKNQPLMKLLNGRMDLQYNDYPIFGANPRHTPKPTGKV
        MA QTQ LVM F LVSLL IFFNTVSASRA +MIHLGQDFPA    +QKNQPL  L NGRMDLQ+NDY IFGANPRHTPKPTGKV
Subjt:  MAGQTQQLVMIFLLVSLL-IFFNTVSASRAAIMIHLGQDFPAFHGAHQKNQPLMKLLNGRMDLQYNDYPIFGANPRHTPKPTGKV

XP_008446367.1 PREDICTED: uncharacterized protein LOC103489129 [Cucumis melo]6.0e-2879.31Show/hide
Query:  MKMAGQTQQLVMIFLLVSLL-IFFNTVSASRAAIMIHLGQDFPAFHGAHQKNQPLMKLLNGRMDLQYNDYPIFGANPRHTPKPTGKV
        MKMA QTQ LVM FLL+SLL IFFNTVSASRA  M+HLGQDFPA   A+QKNQP   L NGRMDLQ+NDY IFGANPRHTPKPTGKV
Subjt:  MKMAGQTQQLVMIFLLVSLL-IFFNTVSASRAAIMIHLGQDFPAFHGAHQKNQPLMKLLNGRMDLQYNDYPIFGANPRHTPKPTGKV

TrEMBL top hitse value%identityAlignment
A0A0A0KQN6 Uncharacterized protein6.5e-2880Show/hide
Query:  MAGQTQQLVMIFLLVSLL-IFFNTVSASRAAIMIHLGQDFPAFHGAHQKNQPLMKLLNGRMDLQYNDYPIFGANPRHTPKPTGKV
        MA QTQ LVM F LVSLL IFFNTVSASRA +MIHLGQDFPA    +QKNQPL  L NGRMDLQ+NDY IFGANPRHTPKPTGKV
Subjt:  MAGQTQQLVMIFLLVSLL-IFFNTVSASRAAIMIHLGQDFPAFHGAHQKNQPLMKLLNGRMDLQYNDYPIFGANPRHTPKPTGKV

A0A1S3BEE6 uncharacterized protein LOC1034891292.9e-2879.31Show/hide
Query:  MKMAGQTQQLVMIFLLVSLL-IFFNTVSASRAAIMIHLGQDFPAFHGAHQKNQPLMKLLNGRMDLQYNDYPIFGANPRHTPKPTGKV
        MKMA QTQ LVM FLL+SLL IFFNTVSASRA  M+HLGQDFPA   A+QKNQP   L NGRMDLQ+NDY IFGANPRHTPKPTGKV
Subjt:  MKMAGQTQQLVMIFLLVSLL-IFFNTVSASRAAIMIHLGQDFPAFHGAHQKNQPLMKLLNGRMDLQYNDYPIFGANPRHTPKPTGKV

A0A5A7SX31 Putative lipoprotein yfhM3.2e-2778.82Show/hide
Query:  MAGQTQQLVMIFLLVSLL-IFFNTVSASRAAIMIHLGQDFPAFHGAHQKNQPLMKLLNGRMDLQYNDYPIFGANPRHTPKPTGKV
        MA QTQ LVM FLL+SLL IFFNTVSASRA  M+HLGQDFPA   A+QKNQP   L NGRMDLQ+NDY IFGANPRHTPKPTGKV
Subjt:  MAGQTQQLVMIFLLVSLL-IFFNTVSASRAAIMIHLGQDFPAFHGAHQKNQPLMKLLNGRMDLQYNDYPIFGANPRHTPKPTGKV

A0A5N5LR04 Uncharacterized protein5.0e-0441.67Show/hide
Query:  MKMAGQTQQLVMIFLLVSLLIFFNTVSASRAAI-MIHLGQD-FPAFHGAHQKNQPLMKLLNGRMDLQYNDYPIFGANPRHTPKP
        ++MAG+    ++I LLVS LIF    SASR  + +++  QD   + H A  + Q + K   GR +L++NDY   GAN RHTP+P
Subjt:  MKMAGQTQQLVMIFLLVSLLIFFNTVSASRAAI-MIHLGQD-FPAFHGAHQKNQPLMKLLNGRMDLQYNDYPIFGANPRHTPKP

B9S8Y1 Uncharacterized protein1.3e-0440.96Show/hide
Query:  MKMAGQTQQLVMIFLLVSLLIF-FNTVSASRAAIMIHLGQDFPAFHGAHQKNQPLMKLLNGRMDLQYNDYPIFGANPRHTPKP
        M +     QLV+I L+ S L+F  N  S SRA  + H GQ  P+    +   Q + KL NGR D++ NDY   G N  HTP+P
Subjt:  MKMAGQTQQLVMIFLLVSLLIF-FNTVSASRAAIMIHLGQDFPAFHGAHQKNQPLMKLLNGRMDLQYNDYPIFGANPRHTPKP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATGGCAGGCCAAACCCAACAATTGGTTATGATTTTTCTCCTTGTCTCTCTACTCATCTTCTTCAACACTGTCTCTGCATCAAGGGCAGCAATTATGATCCATCT
TGGCCAGGATTTTCCAGCTTTCCATGGTGCACACCAGAAGAATCAGCCACTGATGAAGTTGTTGAATGGCAGAATGGATTTGCAGTACAATGACTATCCAATATTTGGGG
CTAATCCTCGCCACACTCCAAAGCCAACGGGGAAAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATCAAAACTGTGTAATGAAAATGGCAGGCCAAACCCAACAATTGGTTATGATTTTTCTCCTTGTCTCTCTACTCATCTTCTTCAACACTGTCTCTGCATCAAGGGCAGCA
ATTATGATCCATCTTGGCCAGGATTTTCCAGCTTTCCATGGTGCACACCAGAAGAATCAGCCACTGATGAAGTTGTTGAATGGCAGAATGGATTTGCAGTACAATGACTA
TCCAATATTTGGGGCTAATCCTCGCCACACTCCAAAGCCAACGGGGAAAGTTTGA
Protein sequenceShow/hide protein sequence
MKMAGQTQQLVMIFLLVSLLIFFNTVSASRAAIMIHLGQDFPAFHGAHQKNQPLMKLLNGRMDLQYNDYPIFGANPRHTPKPTGKV