; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G004540 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G004540
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr04:4317766..4321243
RNA-Seq ExpressionLsi04G004540
SyntenyLsi04G004540
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACL53931.1 unknown [Zea mays]9.9e-2832.74Show/hide
Query:  NEAISLADNGGMLATTNGIHKPMSVVIVHNMEEAPSTPWHPLYQSLTKVVECYSHLHYLIIR--VPDKIHYYLIMVSEVAIGYSDGSGSHNGINETIMTI
        +EA++LAD+GG+    +G+H P+ VV+VH++EEA +   HPL+Q   +VVE +  LH+ ++R  V     +++++V EVA+G+ DG    + +++ +   
Subjt:  NEAISLADNGGMLATTNGIHKPMSVVIVHNMEEAPSTPWHPLYQSLTKVVECYSHLHYLIIR--VPDKIHYYLIMVSEVAIGYSDGSGSHNGINETIMTI

Query:  GHGNMVNPNIGGTKDGNAVTIAHSPQTHMVDSISNHSTATDDNVMDTKAVDDDIFDVLKSNASPISNLNIGPSCINGLVAGHDELLSEPNGHVGREDDPQ
        GHG++V+P++ G + G+AV +A   Q  +   +++H+      V+D + V D +  VL+ +     ++++    ++ LV  HD+LL + + HV RE DPQ
Subjt:  GHGNMVNPNIGGTKDGNAVTIAHSPQTHMVDSISNHSTATDDNVMDTKAVDDDIFDVLKSNASPISNLNIGPSCINGLVAGHDELLSEPNGHVGREDDPQ

Query:  RSLLDHSMTKSPRFRVHEVRIRRVIH
        R +LDH + +    R   + + RV H
Subjt:  RSLLDHSMTKSPRFRVHEVRIRRVIH

ACN33719.1 unknown [Zea mays]5.8e-2836.08Show/hide
Query:  MEEAPSTPWHPLYQSLTKVVECYSHLHYLIIRVPDKI--HYYLIMVSEVAIGYSDGSGSHNGINETIMTIGHGNMVNPNIGGTKDGNAVTIAHSPQTHMV
        ME A   PWH L ++ T++VE Y HLH L++ +   +   ++L++V EV +G+ D  GSH+ I++ +  +G   +V+P++ GT+DG+ +++ H     + 
Subjt:  MEEAPSTPWHPLYQSLTKVVECYSHLHYLIIRVPDKI--HYYLIMVSEVAIGYSDGSGSHNGINETIMTIGHGNMVNPNIGGTKDGNAVTIAHSPQTHMV

Query:  DSISNHSTATDDNVMDTKAVDDDIFDVLKSNASPISNLNIGPSCINGLVAGHDELLSEPNGHVGREDDPQRSLLDHSMTKSPRFRVHEVRIRRV
           ++H       V+D + VDDD+ DVL  +A  I ++++G + ++GL A HDELL E + HV  EDDP+R  LD  + +    RV  V I RV
Subjt:  DSISNHSTATDDNVMDTKAVDDDIFDVLKSNASPISNLNIGPSCINGLVAGHDELLSEPNGHVGREDDPQRSLLDHSMTKSPRFRVHEVRIRRV

ACR34321.1 unknown [Zea mays]1.2e-3336.18Show/hide
Query:  LRRVFSCFDRLRS-----NEAISLADNGGMLATTNGIHKPMSVVIVHNMEEAPSTPWHPLYQSLTKVVECYSHLHYLII--RVPDKIHYYLIMVSEVAIG
        LRRV    D LR      + A++LAD+GG LA  +G+H+P+ VV+V ++EEAP+ PWHPL+++  +VVE  S LH L++   V     + +++V EVA+G
Subjt:  LRRVFSCFDRLRS-----NEAISLADNGGMLATTNGIHKPMSVVIVHNMEEAPSTPWHPLYQSLTKVVECYSHLHYLII--RVPDKIHYYLIMVSEVAIG

Query:  YSDGSGSHNGINETIMTIGHGNMVNPNIGGTKDGNAVTIAHSPQTHMVDSISNHSTAT--DDNVMDTKAVDDDIFDVLKSNASPISNLNIGPSCINGLVA
          D  G  + ++E ++ +G G +V P++GG +DG+AV +       +V  +++ +      D+V+D   VDDD+ D L+     + + ++  + +NGLVA
Subjt:  YSDGSGSHNGINETIMTIGHGNMVNPNIGGTKDGNAVTIAHSPQTHMVDSISNHSTAT--DDNVMDTKAVDDDIFDVLKSNASPISNLNIGPSCINGLVA

Query:  GHDELLSEPNGHVGREDDPQRSLLDHSMTKSPRFRVHEVRIRRVIH
          DELL + + H   E DPQR  LD +  +    RVH V +  V H
Subjt:  GHDELLSEPNGHVGREDDPQRSLLDHSMTKSPRFRVHEVRIRRVIH

KAF7820188.1 hypothetical protein G2W53_025643 [Senna tora]6.6e-2433.18Show/hide
Query:  RSNEAISLADNGGMLATTNGIHKPMSVVIVHNMEEAPSTPWHPLYQSLTKVVECYSHLH----YLIIRVPDKIHYYLIMVSEVAIGYSDGSGSHNGINET
        RS+  I L  NG +  +++GIH P+  +++H+M    STP HPL+Q L +V+E   HLH     +++ VP K H  L+++ E+AI   D    H  I++ 
Subjt:  RSNEAISLADNGGMLATTNGIHKPMSVVIVHNMEEAPSTPWHPLYQSLTKVVECYSHLH----YLIIRVPDKIHYYLIMVSEVAIGYSDGSGSHNGINET

Query:  IMTIGHGNMVNPNIGGTKDGNAVTIAHSPQTHMVDSISNHSTATDDNVMDTKAVDDDIFDVLKSNASPISNLNIGPSCINGLVAGHDELLSEPNGHVGRE
        +  I    +V+P++   +DG+ V +  +P  H+  + ++        V+D   VDDD+ DVL+  A+   ++++G + ++G  A  DEL+ E +GHV  E
Subjt:  IMTIGHGNMVNPNIGGTKDGNAVTIAHSPQTHMVDSISNHSTATDDNVMDTKAVDDDIFDVLKSNASPISNLNIGPSCINGLVAGHDELLSEPNGHVGRE

Query:  DDPQRSLLDHSMTK
        DDP+  +LDH + +
Subjt:  DDPQRSLLDHSMTK

KAG2384001.1 uncharacterized protein HKW66_Vig0152360 [Vigna angularis]2.6e-2835.14Show/hide
Query:  SNEAISLADNGGMLATTNGIHKPMSVVIVHNMEEAPSTPWHPLYQSLTKVVECYSHLHYLI--IRVPDKIHYYLIMVSEVAIGYSDGSGSHNGINETIMT
        SNE +SLA N    A+TNG+H P+SV++V N+EE+PS PWHPL QSL ++VEC+ +LH L+  +RV     +++++   VA+G  DG G+ + I++   +
Subjt:  SNEAISLADNGGMLATTNGIHKPMSVVIVHNMEEAPSTPWHPLYQSLTKVVECYSHLHYLI--IRVPDKIHYYLIMVSEVAIGYSDGSGSHNGINETIMT

Query:  IGHGNMVNPNIGGTKDGNAVTIAHSPQTHMVDSISNHSTATDDNVMDTKAVDDDIFDVLKSNASPISNLNIGPSCINGLVAGHDELLSEPNGHVGREDDP
        IG  N+V   +G                     + +H+T    NV++  +VDDD+   L   A+ + +LN+G + ++GLV G+++LL + + H   EDDP
Subjt:  IGHGNMVNPNIGGTKDGNAVTIAHSPQTHMVDSISNHSTATDDNVMDTKAVDDDIFDVLKSNASPISNLNIGPSCINGLVAGHDELLSEPNGHVGREDDP

Query:  QRSLLDHSMTKSPRFRVHEVRI
        + +LL   +++    RV  V +
Subjt:  QRSLLDHSMTKSPRFRVHEVRI

TrEMBL top hitse value%identityAlignment
A0A287GWW5 Uncharacterized protein9.3e-4039.19Show/hide
Query:  AISLADNGGMLATTNGIHKPMSVVIVHNMEEAPSTPWHPLYQSLTKVVECYSHLHYLIIRVPDKI--HYYLIMVSEVAIGYSDGSGSHNGINETIMTIGH
        A+ LA +G + A+++G+H P+SVVIVH+ME     PWHPL +   ++VE Y  LH L++ V   +   ++LI+V EV +G+SDG G+H+G++E +  +G 
Subjt:  AISLADNGGMLATTNGIHKPMSVVIVHNMEEAPSTPWHPLYQSLTKVVECYSHLHYLIIRVPDKI--HYYLIMVSEVAIGYSDGSGSHNGINETIMTIGH

Query:  GNMVNPNIGGTKDGNAVTIAHSPQTHMVDSISNHSTATDDNVMDTKAVDDDIFDVLKSNASPISNLNIGPSCINGLVAGHDELLSEPNGHVGREDDPQRS
        G +V+P++ G +DG+ V +       +    ++H  A    V+D +AVDDD+ DVL  +A  + ++++G + ++GL A HDELL+E + HV  EDDPQR 
Subjt:  GNMVNPNIGGTKDGNAVTIAHSPQTHMVDSISNHSTATDDNVMDTKAVDDDIFDVLKSNASPISNLNIGPSCINGLVAGHDELLSEPNGHVGREDDPQRS

Query:  LLDHSMTKSPRFRVHEVRIRRV
        +LD  + +     VH V + RV
Subjt:  LLDHSMTKSPRFRVHEVRIRRV

A0A287TZ68 Uncharacterized protein1.6e-2834.22Show/hide
Query:  AISLADNGGMLATTNGIHKPMSVVIVHNMEEAPSTPWHPLYQSLTKVVECYSHLHYLIIR--VPDKIHYYLIMVSEVAIGYSDGSGSHNGINETIMTIGH
        A+ LAD+GG+ A +NG+H+P+ VV+V ++EEA +   HPL+++  +V+E    LH+L++   V     +++++V EVA+G  DG G  + ++  ++   H
Subjt:  AISLADNGGMLATTNGIHKPMSVVIVHNMEEAPSTPWHPLYQSLTKVVECYSHLHYLIIR--VPDKIHYYLIMVSEVAIGYSDGSGSHNGINETIMTIGH

Query:  GNMVNPNIGGTKDGNAVTIAHSPQTHMVDSISNHSTATDDNVMDTKAVDDDIFDVLKSNASPISNLNIGPSCINGLVAGHDELLSEPNGHVGREDDPQRS
        G +V+P++ G +DG+AV +       +V    + +     +V+D + VDDD+  VL   A+ + ++++  + + GLVA   +LL   + HV  EDDPQR 
Subjt:  GNMVNPNIGGTKDGNAVTIAHSPQTHMVDSISNHSTATDDNVMDTKAVDDDIFDVLKSNASPISNLNIGPSCINGLVAGHDELLSEPNGHVGREDDPQRS

Query:  LLDHSMTKSPRFRVHEVRIRRVIHD
         LDH+  +    RV EV +  V HD
Subjt:  LLDHSMTKSPRFRVHEVRIRRVIHD

A0A287TZ69 Uncharacterized protein1.6e-2834.22Show/hide
Query:  AISLADNGGMLATTNGIHKPMSVVIVHNMEEAPSTPWHPLYQSLTKVVECYSHLHYLIIR--VPDKIHYYLIMVSEVAIGYSDGSGSHNGINETIMTIGH
        A+ LAD+GG+ A +NG+H+P+ VV+V ++EEA +   HPL+++  +V+E    LH+L++   V     +++++V EVA+G  DG G  + ++  ++   H
Subjt:  AISLADNGGMLATTNGIHKPMSVVIVHNMEEAPSTPWHPLYQSLTKVVECYSHLHYLIIR--VPDKIHYYLIMVSEVAIGYSDGSGSHNGINETIMTIGH

Query:  GNMVNPNIGGTKDGNAVTIAHSPQTHMVDSISNHSTATDDNVMDTKAVDDDIFDVLKSNASPISNLNIGPSCINGLVAGHDELLSEPNGHVGREDDPQRS
        G +V+P++ G +DG+AV +       +V    + +     +V+D + VDDD+  VL   A+ + ++++  + + GLVA   +LL   + HV  EDDPQR 
Subjt:  GNMVNPNIGGTKDGNAVTIAHSPQTHMVDSISNHSTATDDNVMDTKAVDDDIFDVLKSNASPISNLNIGPSCINGLVAGHDELLSEPNGHVGREDDPQRS

Query:  LLDHSMTKSPRFRVHEVRIRRVIHD
         LDH+  +    RV EV +  V HD
Subjt:  LLDHSMTKSPRFRVHEVRIRRVIHD

A0A287U006 Uncharacterized protein1.6e-2834.22Show/hide
Query:  AISLADNGGMLATTNGIHKPMSVVIVHNMEEAPSTPWHPLYQSLTKVVECYSHLHYLIIR--VPDKIHYYLIMVSEVAIGYSDGSGSHNGINETIMTIGH
        A+ LAD+GG+ A +NG+H+P+ VV+V ++EEA +   HPL+++  +V+E    LH+L++   V     +++++V EVA+G  DG G  + ++  ++   H
Subjt:  AISLADNGGMLATTNGIHKPMSVVIVHNMEEAPSTPWHPLYQSLTKVVECYSHLHYLIIR--VPDKIHYYLIMVSEVAIGYSDGSGSHNGINETIMTIGH

Query:  GNMVNPNIGGTKDGNAVTIAHSPQTHMVDSISNHSTATDDNVMDTKAVDDDIFDVLKSNASPISNLNIGPSCINGLVAGHDELLSEPNGHVGREDDPQRS
        G +V+P++ G +DG+AV +       +V    + +     +V+D + VDDD+  VL   A+ + ++++  + + GLVA   +LL   + HV  EDDPQR 
Subjt:  GNMVNPNIGGTKDGNAVTIAHSPQTHMVDSISNHSTATDDNVMDTKAVDDDIFDVLKSNASPISNLNIGPSCINGLVAGHDELLSEPNGHVGREDDPQRS

Query:  LLDHSMTKSPRFRVHEVRIRRVIHD
         LDH+  +    RV EV +  V HD
Subjt:  LLDHSMTKSPRFRVHEVRIRRVIHD

C4IZH1 Uncharacterized protein5.8e-3436.18Show/hide
Query:  LRRVFSCFDRLRS-----NEAISLADNGGMLATTNGIHKPMSVVIVHNMEEAPSTPWHPLYQSLTKVVECYSHLHYLII--RVPDKIHYYLIMVSEVAIG
        LRRV    D LR      + A++LAD+GG LA  +G+H+P+ VV+V ++EEAP+ PWHPL+++  +VVE  S LH L++   V     + +++V EVA+G
Subjt:  LRRVFSCFDRLRS-----NEAISLADNGGMLATTNGIHKPMSVVIVHNMEEAPSTPWHPLYQSLTKVVECYSHLHYLII--RVPDKIHYYLIMVSEVAIG

Query:  YSDGSGSHNGINETIMTIGHGNMVNPNIGGTKDGNAVTIAHSPQTHMVDSISNHSTAT--DDNVMDTKAVDDDIFDVLKSNASPISNLNIGPSCINGLVA
          D  G  + ++E ++ +G G +V P++GG +DG+AV +       +V  +++ +      D+V+D   VDDD+ D L+     + + ++  + +NGLVA
Subjt:  YSDGSGSHNGINETIMTIGHGNMVNPNIGGTKDGNAVTIAHSPQTHMVDSISNHSTAT--DDNVMDTKAVDDDIFDVLKSNASPISNLNIGPSCINGLVA

Query:  GHDELLSEPNGHVGREDDPQRSLLDHSMTKSPRFRVHEVRIRRVIH
          DELL + + H   E DPQR  LD +  +    RVH V +  V H
Subjt:  GHDELLSEPNGHVGREDDPQRSLLDHSMTKSPRFRVHEVRIRRVIH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGGGCTCTTAAAGAACTTACTGACACACTGTCAAGAGATTTTTATAGAAGACCAACCAAGAGCCCTGCACAGCAAGGGCGACCAACGAAGCAGGCGAGCGCACC
TGCAAAACGTGTCATTCTTGTAACGAGATCATATCCATCCTTGAGAAGGGTCTTCTCTTGCTTTGATCGCCTGAGGAGCAATGAAGCGATTTCCCTGGCTGATAATGGTG
GGATGCTGGCTACCACCAATGGCATACATAAGCCAATGAGTGTAGTCATTGTTCACAACATGGAAGAAGCCCCATCGACACCTTGGCATCCTCTGTACCAATCCTTGACC
AAAGTGGTTGAATGCTACAGTCACTTGCATTATCTGATCATTCGAGTACCCGATAAGATACATTATTACCTCATTATGGTGAGTGAAGTGGCAATTGGATATAGTGATGG
CAGTGGATCCCATAATGGCATCAATGAGACCATCATGACAATTGGACATGGAAACATGGTCAATCCAAACATTGGAGGAACCAAAGATGGAAATGCCGTCACCATCGCTC
ATAGTCCTCAAACCCACATGGTCGACAGCATCTCGAATCATTCCACCGCTACCGACGACAATGTGATGGATACGAAGGCCGTGGATGATGACATTTTTGATGTACTGAAG
AGTAATGCCAGCCCCATAAGCAATCTGAACATTGGCCCCTCTTGCATCAATGGTCTTGTCGCTGGTCACGATGAGCTCCTGAGTGAGCCTAATGGCCATGTTGGTAGAGA
AGATGATCCACAGAGGTCCCTTTTGGATCACAGCATGACGAAGAGTCCCAGGTTTCGGGTTCATGAGGTCCGAATCCGACGAGTCATTCACGACTATGGACCCAACTTTC
CACCAATGGTCTTGCGGCCAAAACCCAAAACACAATCGGCTAGCTTCTTCCGGTTATTGGCCCAATTGGGGTCGCATCTCCAGCACCGATCAATGGGATTAGTGGCTCGA
CATGGGCCTGTATATTTCTTCAAATTCCTCCTCGTACTGTTGCTTCCACTCAATACCCTGCATCAAACTCAACCCCCATTAATTCATTCCCCTAATTCCGAGTTTAGTTC
AATGATTAAAGTTGTAAGAAACTACAAATTTCAAACTTACTGGCCAACTTCGGCATTGAAGGAGTTGGTGACGTTCTCAGGATTAGGCTCGAAGGCATCGGTGGCGGCTT
TTTCAGCCTCGGCAGCGCGTGCTTTCCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGGGCTCTTAAAGAACTTACTGACACACTGTCAAGAGATTTTTATAGAAGACCAACCAAGAGCCCTGCACAGCAAGGGCGACCAACGAAGCAGGCGAGCGCACC
TGCAAAACGTGTCATTCTTGTAACGAGATCATATCCATCCTTGAGAAGGGTCTTCTCTTGCTTTGATCGCCTGAGGAGCAATGAAGCGATTTCCCTGGCTGATAATGGTG
GGATGCTGGCTACCACCAATGGCATACATAAGCCAATGAGTGTAGTCATTGTTCACAACATGGAAGAAGCCCCATCGACACCTTGGCATCCTCTGTACCAATCCTTGACC
AAAGTGGTTGAATGCTACAGTCACTTGCATTATCTGATCATTCGAGTACCCGATAAGATACATTATTACCTCATTATGGTGAGTGAAGTGGCAATTGGATATAGTGATGG
CAGTGGATCCCATAATGGCATCAATGAGACCATCATGACAATTGGACATGGAAACATGGTCAATCCAAACATTGGAGGAACCAAAGATGGAAATGCCGTCACCATCGCTC
ATAGTCCTCAAACCCACATGGTCGACAGCATCTCGAATCATTCCACCGCTACCGACGACAATGTGATGGATACGAAGGCCGTGGATGATGACATTTTTGATGTACTGAAG
AGTAATGCCAGCCCCATAAGCAATCTGAACATTGGCCCCTCTTGCATCAATGGTCTTGTCGCTGGTCACGATGAGCTCCTGAGTGAGCCTAATGGCCATGTTGGTAGAGA
AGATGATCCACAGAGGTCCCTTTTGGATCACAGCATGACGAAGAGTCCCAGGTTTCGGGTTCATGAGGTCCGAATCCGACGAGTCATTCACGACTATGGACCCAACTTTC
CACCAATGGTCTTGCGGCCAAAACCCAAAACACAATCGGCTAGCTTCTTCCGGTTATTGGCCCAATTGGGGTCGCATCTCCAGCACCGATCAATGGGATTAGTGGCTCGA
CATGGGCCTGTATATTTCTTCAAATTCCTCCTCGTACTGTTGCTTCCACTCAATACCCTGCATCAAACTCAACCCCCATTAATTCATTCCCCTAATTCCGAGTTTAGTTC
AATGATTAAAGTTGTAAGAAACTACAAATTTCAAACTTACTGGCCAACTTCGGCATTGAAGGAGTTGGTGACGTTCTCAGGATTAGGCTCGAAGGCATCGGTGGCGGCTT
TTTCAGCCTCGGCAGCGCGTGCTTTCCAGTAG
Protein sequenceShow/hide protein sequence
MEGALKELTDTLSRDFYRRPTKSPAQQGRPTKQASAPAKRVILVTRSYPSLRRVFSCFDRLRSNEAISLADNGGMLATTNGIHKPMSVVIVHNMEEAPSTPWHPLYQSLT
KVVECYSHLHYLIIRVPDKIHYYLIMVSEVAIGYSDGSGSHNGINETIMTIGHGNMVNPNIGGTKDGNAVTIAHSPQTHMVDSISNHSTATDDNVMDTKAVDDDIFDVLK
SNASPISNLNIGPSCINGLVAGHDELLSEPNGHVGREDDPQRSLLDHSMTKSPRFRVHEVRIRRVIHDYGPNFPPMVLRPKPKTQSASFFRLLAQLGSHLQHRSMGLVAR
HGPVYFFKFLLVLLLPLNTLHQTQPPLIHSPNSEFSSMIKVVRNYKFQTYWPTSALKELVTFSGLGSKASVAAFSASAARAFQ