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Lsi04G004650 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G004650
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionOligouridylate-binding protein 1-like
Genome locationchr04:4404166..4404611
RNA-Seq ExpressionLsi04G004650
SyntenyLsi04G004650
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PQP97331.1 hypothetical protein Pyn_09063 [Prunus yedoensis var. nudiflora]5.9e-0875Show/hide
Query:  FLISRRMLHMKVDIMKRITPVRMASFIPRFTNKLTRSPATTTPKKFAE
        FL  RRMLHM VDIMKRI PV +A   PRFT+K TRSPA TTPKKFAE
Subjt:  FLISRRMLHMKVDIMKRITPVRMASFIPRFTNKLTRSPATTTPKKFAE
PQQ12768.1 oligouridylate-binding protein 1-like [Prunus yedoensis var. nudiflora]1.3e-0772.92Show/hide
Query:  FLISRRMLHMKVDIMKRITPVRMASFIPRFTNKLTRSPATTTPKKFAE
        FL  RRMLHM VDIMKRI PV +A   PRFT+K TRSP+ TTPKKFAE
Subjt:  FLISRRMLHMKVDIMKRITPVRMASFIPRFTNKLTRSPATTTPKKFAE
TrEMBL top hitse value%identityAlignment
A0A314XSV4 Uncharacterized protein2.8e-0875Show/hide
Query:  FLISRRMLHMKVDIMKRITPVRMASFIPRFTNKLTRSPATTTPKKFAE
        FL  RRMLHM VDIMKRI PV +A   PRFT+K TRSPA TTPKKFAE
Subjt:  FLISRRMLHMKVDIMKRITPVRMASFIPRFTNKLTRSPATTTPKKFAE
A0A314Z6L5 Oligouridylate-binding protein 1-like6.3e-0872.92Show/hide
Query:  FLISRRMLHMKVDIMKRITPVRMASFIPRFTNKLTRSPATTTPKKFAE
        FL  RRMLHM VDIMKRI PV +A   PRFT+K TRSP+ TTPKKFAE
Subjt:  FLISRRMLHMKVDIMKRITPVRMASFIPRFTNKLTRSPATTTPKKFAE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATTAGAGAAAAATCTACGCCACCAAGAAAATACTTTTCTTATCAGTCGAAGAATGCTCCACATGAAAGTTGATATAATGAAAAGAATCACTCCAGTGAGAATGGC
CTCCTTCATACCAAGATTTACCAACAAGTTGACCAGAAGCCCTGCCACTACAACACCAAAGAAATTTGCAGAGACACCTGACCAGAATGGCATATCTAAGATGGAAGCTA
TTATGGCACCAGTCCAAGCTCCTGTTCCAGGGAAAGGCACGGCCACAAATAGCATTAGACCAAGCCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGATATTAGAGAAAAATCTACGCCACCAAGAAAATACTTTTCTTATCAGTCGAAGAATGCTCCACATGAAAGTTGATATAATGAAAAGAATCACTCCAGTGAGAATGGC
CTCCTTCATACCAAGATTTACCAACAAGTTGACCAGAAGCCCTGCCACTACAACACCAAAGAAATTTGCAGAGACACCTGACCAGAATGGCATATCTAAGATGGAAGCTA
TTATGGCACCAGTCCAAGCTCCTGTTCCAGGGAAAGGCACGGCCACAAATAGCATTAGACCAAGCCACTGA
Protein sequenceShow/hide protein sequence
MILEKNLRHQENTFLISRRMLHMKVDIMKRITPVRMASFIPRFTNKLTRSPATTTPKKFAETPDQNGISKMEAIMAPVQAPVPGKGTATNSIRPSH