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Lsi04G004770 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G004770
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein NRT1/ PTR FAMILY 2.13-like
Genome locationchr04:4454209..4454418
RNA-Seq ExpressionLsi04G004770
SyntenyLsi04G004770
Gene Ontology termsGO:0006810 - transport (biological process)
GO:0005886 - plasma membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574115.1 Protein NRT1/ PTR FAMILY 2.13, partial [Cucurbita argyrosperma subsp. sororia]6.1e-0764.71Show/hide
Query:  MEGEAQSKASSSPSNNLPCFTKDANPKLSISLHNKSKREPGGWKSMPYILG
        ME E  SKA+SSP+  L C T D +PKLSIS    S R+PGGWKSMPYILG
Subjt:  MEGEAQSKASSSPSNNLPCFTKDANPKLSISLHNKSKREPGGWKSMPYILG

KAG7013175.1 Protein NRT1/ PTR FAMILY 2.13, partial [Cucurbita argyrosperma subsp. argyrosperma]6.1e-0764.71Show/hide
Query:  MEGEAQSKASSSPSNNLPCFTKDANPKLSISLHNKSKREPGGWKSMPYILG
        ME E  SKA+SSP+  L C T D +PKLSIS    S R+PGGWKSMPYILG
Subjt:  MEGEAQSKASSSPSNNLPCFTKDANPKLSISLHNKSKREPGGWKSMPYILG

XP_022944964.1 protein NRT1/ PTR FAMILY 2.13-like [Cucurbita moschata]6.1e-0764.71Show/hide
Query:  MEGEAQSKASSSPSNNLPCFTKDANPKLSISLHNKSKREPGGWKSMPYILG
        ME E  SKA+SSP+  L C T D +PKLSIS    S R+PGGWKSMPYILG
Subjt:  MEGEAQSKASSSPSNNLPCFTKDANPKLSISLHNKSKREPGGWKSMPYILG

XP_023542266.1 protein NRT1/ PTR FAMILY 2.13-like [Cucurbita pepo subsp. pepo]6.1e-0764.71Show/hide
Query:  MEGEAQSKASSSPSNNLPCFTKDANPKLSISLHNKSKREPGGWKSMPYILG
        ME E  SKA+SSP+  L C T D +PKLSIS    S R+PGGWKSMPYILG
Subjt:  MEGEAQSKASSSPSNNLPCFTKDANPKLSISLHNKSKREPGGWKSMPYILG

XP_038892122.1 protein NRT1/ PTR FAMILY 2.13-like [Benincasa hispida]7.0e-1178.43Show/hide
Query:  MEGEAQSKASSSPSNNLPCFTKDANPKLSISLHNKSKREPGGWKSMPYILG
        ME EA+SKASSSPS NL CFTKD      +SLHNKSKREPGGWKSMPYILG
Subjt:  MEGEAQSKASSSPSNNLPCFTKDANPKLSISLHNKSKREPGGWKSMPYILG

TrEMBL top hitse value%identityAlignment
A0A0A0KTW3 Uncharacterized protein4.3e-0666.04Show/hide
Query:  MEGEAQSKASSSPSNNLPCFTKDA--NPKLSISLHNKSKREPGGWKSMPYILG
        ME E++ KASS  ++  P  +KDA  NPKLSI + NKSKREPGGWKSMPYILG
Subjt:  MEGEAQSKASSSPSNNLPCFTKDA--NPKLSISLHNKSKREPGGWKSMPYILG

A0A1S3BEQ4 LOW QUALITY PROTEIN: protein NRT1/ PTR FAMILY 2.13-like1.6e-0564.81Show/hide
Query:  MEGEAQSKASSSPSNNLPCFTKDA---NPKLSISLHNKSKREPGGWKSMPYILG
        ME E++ K SS  +++ P   KDA   NPKLSIS  NKSKREPGGWKSMPYILG
Subjt:  MEGEAQSKASSSPSNNLPCFTKDA---NPKLSISLHNKSKREPGGWKSMPYILG

A0A6J1FZM4 protein NRT1/ PTR FAMILY 2.13-like3.0e-0764.71Show/hide
Query:  MEGEAQSKASSSPSNNLPCFTKDANPKLSISLHNKSKREPGGWKSMPYILG
        ME E  SKA+SSP+  L C T D +PKLSIS    S R+PGGWKSMPYILG
Subjt:  MEGEAQSKASSSPSNNLPCFTKDANPKLSISLHNKSKREPGGWKSMPYILG

A0A6J1HWP9 protein NRT1/ PTR FAMILY 2.13-like6.6e-0762.75Show/hide
Query:  MEGEAQSKASSSPSNNLPCFTKDANPKLSISLHNKSKREPGGWKSMPYILG
        ME E  SKA+SSP+  L C T D +PKLS+S    S R+PGGWKSMPYILG
Subjt:  MEGEAQSKASSSPSNNLPCFTKDANPKLSISLHNKSKREPGGWKSMPYILG

A0A6J1KAA8 protein NRT1/ PTR FAMILY 2.13-like4.0e-0482.14Show/hide
Query:  ANPKLSISLHNKSKREPGGWKSMPYILG
        ANPKL  S  NK+KREPGGWKSMPYILG
Subjt:  ANPKLSISLHNKSKREPGGWKSMPYILG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGTGAGGCTCAAAGCAAAGCTTCAAGCTCTCCCAGCAATAACTTACCGTGCTTCACCAAAGATGCTAATCCTAAACTTTCCATTTCCCTTCACAACAAATCTAA
AAGAGAGCCTGGAGGATGGAAGAGCATGCCTTACATCCTTGGTCTCTTCTTCTTCTTCTTCTTCTGTTTCATTTCATTTTCAGGGGCTGGATATGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGTGAGGCTCAAAGCAAAGCTTCAAGCTCTCCCAGCAATAACTTACCGTGCTTCACCAAAGATGCTAATCCTAAACTTTCCATTTCCCTTCACAACAAATCTAA
AAGAGAGCCTGGAGGATGGAAGAGCATGCCTTACATCCTTGGTCTCTTCTTCTTCTTCTTCTTCTGTTTCATTTCATTTTCAGGGGCTGGATATGTATAA
Protein sequenceShow/hide protein sequence
MEGEAQSKASSSPSNNLPCFTKDANPKLSISLHNKSKREPGGWKSMPYILGLFFFFFFCFISFSGAGYV