; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G004890 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G004890
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTetratricopeptide repeat protein 38
Genome locationchr04:4516861..4521139
RNA-Seq ExpressionLsi04G004890
SyntenyLsi04G004890
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily
IPR033891 - Tetratricopeptide repeat protein 38


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135208.1 tetratricopeptide repeat protein 38 [Cucumis sativus]4.6e-18782.14Show/hide
Query:  MEDGLKLTKWGYEIRTSSDACISAINAFYDQVLSYGRKRSVILEATVHDKDCMLANVLAAHFLSSSNPSRVHHHLQAAKASLDRATPYEKAVFDAISCLL
        MEDG+KLTKWGY IRTSSD CISAINAFYDQVLSYGRKRSVILEATVHDKDC+LANVL AHFLSSS+PSR H+HLQ AKA LDRATPYEKAVFDAISCL+
Subjt:  MEDGLKLTKWGYEIRTSSDACISAINAFYDQVLSYGRKRSVILEATVHDKDCMLANVLAAHFLSSSNPSRVHHHLQAAKASLDRATPYEKAVFDAISCLL

Query:  SNDRDDNVAVELHTELLKNFPKDLMSLKRAQMLCFYLGSADISLALVQQVLPQNQEEGFIYGMLAFPLLELGCMEEAEKAARKGLDINKKDGWAQHALCH
        SNDRDDNVAVELHTELLKNFPKDL SLKRAQ+LCFYLGSAD+SLALVQQVLPQNQEEGFIYGMLAFPLLELGCMEEAEKAAR+GLDINKKDGWAQHALCH
Subjt:  SNDRDDNVAVELHTELLKNFPKDLMSLKRAQMLCFYLGSADISLALVQQVLPQNQEEGFIYGMLAFPLLELGCMEEAEKAARKGLDINKKDGWAQHALCH

Query:  ILQYRCHFKEAVEFMEACSPSWSDCLSFMVTHNWWHVTLCYLEANSPLSKILELYDNHIWKELEKPDAMRPDVYLNALGLMLRLFVRGDFDPCEGRLKIL
        +LQYRCHFKEAVEFME CSPSW DC+SFMVTHNWWHV LCYLEANSPLSKILE+YDN+IWKELEKPDA+ P+VYLNALGLMLRLFVRG++DPCEGRLKIL
Subjt:  ILQYRCHFKEAVEFMEACSPSWSDCLSFMVTHNWWHVTLCYLEANSPLSKILELYDNHIWKELEKPDAMRPDVYLNALGLMLRLFVRGDFDPCEGRLKIL

Query:  ANVLTDKANWHLDWHFDVLISWALAKAGENFAAEELLGSLKSRFVQCSLIAFLFIYMYVSLWLFVYCYRLFLCRLLKMTPQKREKMQRGMLV
        ANVLTDKANWHL+WHFD+L  WALAKAGE FAA+ELLGSLKS                               RL KMT +KREKMQR +L+
Subjt:  ANVLTDKANWHLDWHFDVLISWALAKAGENFAAEELLGSLKSRFVQCSLIAFLFIYMYVSLWLFVYCYRLFLCRLLKMTPQKREKMQRGMLV

XP_022956844.1 tetratricopeptide repeat protein 38-like isoform X2 [Cucurbita moschata]6.7e-18680.87Show/hide
Query:  MEDGLKLTKWGYEIRTSSDACISAINAFYDQVLSYGRKRSVILEATVHDKDCMLANVLAAHFLSSSNPSRVHHHLQAAKASLDRATPYEKAVFDAISCLL
        MEDGLKLTKWGYE+RTSSDACISAINAFYDQVLSYGR+RSVILEA VHDK C+LANV AA+FLSSS+PSRVHHHLQAAK  LDRATPYEKAV+DAI+CL+
Subjt:  MEDGLKLTKWGYEIRTSSDACISAINAFYDQVLSYGRKRSVILEATVHDKDCMLANVLAAHFLSSSNPSRVHHHLQAAKASLDRATPYEKAVFDAISCLL

Query:  SNDRDDNVAVELHTELLKNFPKDLMSLKRAQMLCFYLGSADISLALVQQVLPQNQEEGFIYGMLAFPLLELGCMEEAEKAARKGLDINKKDGWAQHALCH
        SNDRDDNVAVEL T+LLK+FPKDL+SLK+AQ+LCFY+G+ D+SLALVQQVLPQNQEEGFIYGMLAFPLLELGCMEEAEKAAR+GLDINKKDGWAQHALCH
Subjt:  SNDRDDNVAVELHTELLKNFPKDLMSLKRAQMLCFYLGSADISLALVQQVLPQNQEEGFIYGMLAFPLLELGCMEEAEKAARKGLDINKKDGWAQHALCH

Query:  ILQYRCHFKEAVEFMEACSPSWSDCLSFMVTHNWWHVTLCYLEANSPLSKILELYDNHIWKELEKPDAMRPDVYLNALGLMLRLFVRGDFDPCEGRLKIL
        +LQYRC FKEAVEFMEACSP+WSDCLSF+VTHNWWHV LCYLEANSPLSKILE+YDN+IWKELEKPDAM PDVYLNALGLMLRLFVRG+F PCEGRLKIL
Subjt:  ILQYRCHFKEAVEFMEACSPSWSDCLSFMVTHNWWHVTLCYLEANSPLSKILELYDNHIWKELEKPDAMRPDVYLNALGLMLRLFVRGDFDPCEGRLKIL

Query:  ANVLTDKANWHLDWHFDVLISWALAKAGENFAAEELLGSLKSRFVQCSLIAFLFIYMYVSLWLFVYCYRLFLCRLLKMTPQKREKMQRGMLV
        ANVLTDKANWHL+WHFD+L +WALAK+GE FAAEELLGSLKS                               R+LKMTP+K+EKMQRGML+
Subjt:  ANVLTDKANWHLDWHFDVLISWALAKAGENFAAEELLGSLKSRFVQCSLIAFLFIYMYVSLWLFVYCYRLFLCRLLKMTPQKREKMQRGMLV

XP_038891806.1 tetratricopeptide repeat protein 38 isoform X1 [Benincasa hispida]2.5e-19385.46Show/hide
Query:  MEDGLKLTKWGYEIRTSSDACISAINAFYDQVLSYGRKRSVILEATVHDKDCMLANVLAAHFLSSSNPSRVHHHLQAAKASLDRATPYEKAVFDAISCLL
        ME G+KLTKWGY+IRTSSDACISAINAFYDQVLSYGRKRSVIL+ATVHDKDC+LANVLA HFLSSS+PSRVHHHLQAAKA LDRATPYEKAVFDAISCL+
Subjt:  MEDGLKLTKWGYEIRTSSDACISAINAFYDQVLSYGRKRSVILEATVHDKDCMLANVLAAHFLSSSNPSRVHHHLQAAKASLDRATPYEKAVFDAISCLL

Query:  SNDRDDNVAVELHTELLKNFPKDLMSLKRAQMLCFYLGSADISLALVQQVLPQNQEEGFIYGMLAFPLLELGCMEEAEKAARKGLDINKKDGWAQHALCH
        SN+RDDNVAVELH+ELLK FPKDL+SLKRAQ+LCFY+G+AD+SLALVQQVLPQNQEEGFIYGMLAF LLELG MEEAEKAAR+GLDINKKDGWAQHALCH
Subjt:  SNDRDDNVAVELHTELLKNFPKDLMSLKRAQMLCFYLGSADISLALVQQVLPQNQEEGFIYGMLAFPLLELGCMEEAEKAARKGLDINKKDGWAQHALCH

Query:  ILQYRCHFKEAVEFMEACSPSWSDCLSFMVTHNWWHVTLCYLEANSPLSKILELYDNHIWKELEKPDAMRPDVYLNALGLMLRLFVRGDFDPCEGRLKIL
        +LQYRCHFKEAVEFMEACSPSWSDCLSFMVTHNWWHV LCYLEANS LS+ILE+YDN+IWKELEKPDAM PDVYLNALGLMLRLFVRG++DPCEGRLKIL
Subjt:  ILQYRCHFKEAVEFMEACSPSWSDCLSFMVTHNWWHVTLCYLEANSPLSKILELYDNHIWKELEKPDAMRPDVYLNALGLMLRLFVRGDFDPCEGRLKIL

Query:  ANVLTDKANWHLDWHFDVLISWALAKAGENFAAEELLGSLKSRFVQCSLIAFLFIYMYVSLWLFVYCYRLFLCRLLKMTPQKREKMQRGMLV
        A VLTDKANWHL+WHFDVL SWALAKAG+ FAAEELLGSLKSR   CS++  L  Y++V  ++  Y Y LFL RLLKMTP++REKMQRGML+
Subjt:  ANVLTDKANWHLDWHFDVLISWALAKAGENFAAEELLGSLKSRFVQCSLIAFLFIYMYVSLWLFVYCYRLFLCRLLKMTPQKREKMQRGMLV

XP_038891807.1 tetratricopeptide repeat protein 38 isoform X2 [Benincasa hispida]2.5e-19385.46Show/hide
Query:  MEDGLKLTKWGYEIRTSSDACISAINAFYDQVLSYGRKRSVILEATVHDKDCMLANVLAAHFLSSSNPSRVHHHLQAAKASLDRATPYEKAVFDAISCLL
        ME G+KLTKWGY+IRTSSDACISAINAFYDQVLSYGRKRSVIL+ATVHDKDC+LANVLA HFLSSS+PSRVHHHLQAAKA LDRATPYEKAVFDAISCL+
Subjt:  MEDGLKLTKWGYEIRTSSDACISAINAFYDQVLSYGRKRSVILEATVHDKDCMLANVLAAHFLSSSNPSRVHHHLQAAKASLDRATPYEKAVFDAISCLL

Query:  SNDRDDNVAVELHTELLKNFPKDLMSLKRAQMLCFYLGSADISLALVQQVLPQNQEEGFIYGMLAFPLLELGCMEEAEKAARKGLDINKKDGWAQHALCH
        SN+RDDNVAVELH+ELLK FPKDL+SLKRAQ+LCFY+G+AD+SLALVQQVLPQNQEEGFIYGMLAF LLELG MEEAEKAAR+GLDINKKDGWAQHALCH
Subjt:  SNDRDDNVAVELHTELLKNFPKDLMSLKRAQMLCFYLGSADISLALVQQVLPQNQEEGFIYGMLAFPLLELGCMEEAEKAARKGLDINKKDGWAQHALCH

Query:  ILQYRCHFKEAVEFMEACSPSWSDCLSFMVTHNWWHVTLCYLEANSPLSKILELYDNHIWKELEKPDAMRPDVYLNALGLMLRLFVRGDFDPCEGRLKIL
        +LQYRCHFKEAVEFMEACSPSWSDCLSFMVTHNWWHV LCYLEANS LS+ILE+YDN+IWKELEKPDAM PDVYLNALGLMLRLFVRG++DPCEGRLKIL
Subjt:  ILQYRCHFKEAVEFMEACSPSWSDCLSFMVTHNWWHVTLCYLEANSPLSKILELYDNHIWKELEKPDAMRPDVYLNALGLMLRLFVRGDFDPCEGRLKIL

Query:  ANVLTDKANWHLDWHFDVLISWALAKAGENFAAEELLGSLKSRFVQCSLIAFLFIYMYVSLWLFVYCYRLFLCRLLKMTPQKREKMQRGMLV
        A VLTDKANWHL+WHFDVL SWALAKAG+ FAAEELLGSLKSR   CS++  L  Y++V  ++  Y Y LFL RLLKMTP++REKMQRGML+
Subjt:  ANVLTDKANWHLDWHFDVLISWALAKAGENFAAEELLGSLKSRFVQCSLIAFLFIYMYVSLWLFVYCYRLFLCRLLKMTPQKREKMQRGMLV

XP_038891808.1 tetratricopeptide repeat protein 38 isoform X3 [Benincasa hispida]2.4e-18882.65Show/hide
Query:  MEDGLKLTKWGYEIRTSSDACISAINAFYDQVLSYGRKRSVILEATVHDKDCMLANVLAAHFLSSSNPSRVHHHLQAAKASLDRATPYEKAVFDAISCLL
        ME G+KLTKWGY+IRTSSDACISAINAFYDQVLSYGRKRSVIL+ATVHDKDC+LANVLA HFLSSS+PSRVHHHLQAAKA LDRATPYEKAVFDAISCL+
Subjt:  MEDGLKLTKWGYEIRTSSDACISAINAFYDQVLSYGRKRSVILEATVHDKDCMLANVLAAHFLSSSNPSRVHHHLQAAKASLDRATPYEKAVFDAISCLL

Query:  SNDRDDNVAVELHTELLKNFPKDLMSLKRAQMLCFYLGSADISLALVQQVLPQNQEEGFIYGMLAFPLLELGCMEEAEKAARKGLDINKKDGWAQHALCH
        SN+RDDNVAVELH+ELLK FPKDL+SLKRAQ+LCFY+G+AD+SLALVQQVLPQNQEEGFIYGMLAF LLELG MEEAEKAAR+GLDINKKDGWAQHALCH
Subjt:  SNDRDDNVAVELHTELLKNFPKDLMSLKRAQMLCFYLGSADISLALVQQVLPQNQEEGFIYGMLAFPLLELGCMEEAEKAARKGLDINKKDGWAQHALCH

Query:  ILQYRCHFKEAVEFMEACSPSWSDCLSFMVTHNWWHVTLCYLEANSPLSKILELYDNHIWKELEKPDAMRPDVYLNALGLMLRLFVRGDFDPCEGRLKIL
        +LQYRCHFKEAVEFMEACSPSWSDCLSFMVTHNWWHV LCYLEANS LS+ILE+YDN+IWKELEKPDAM PDVYLNALGLMLRLFVRG++DPCEGRLKIL
Subjt:  ILQYRCHFKEAVEFMEACSPSWSDCLSFMVTHNWWHVTLCYLEANSPLSKILELYDNHIWKELEKPDAMRPDVYLNALGLMLRLFVRGDFDPCEGRLKIL

Query:  ANVLTDKANWHLDWHFDVLISWALAKAGENFAAEELLGSLKSRFVQCSLIAFLFIYMYVSLWLFVYCYRLFLCRLLKMTPQKREKMQRGMLV
        A VLTDKANWHL+WHFDVL SWALAKAG+ FAAEELLGSLKS                               RLLKMTP++REKMQRGML+
Subjt:  ANVLTDKANWHLDWHFDVLISWALAKAGENFAAEELLGSLKSRFVQCSLIAFLFIYMYVSLWLFVYCYRLFLCRLLKMTPQKREKMQRGMLV

TrEMBL top hitse value%identityAlignment
A0A0A0KSI1 Tetratricopeptide repeat protein 382.2e-18782.14Show/hide
Query:  MEDGLKLTKWGYEIRTSSDACISAINAFYDQVLSYGRKRSVILEATVHDKDCMLANVLAAHFLSSSNPSRVHHHLQAAKASLDRATPYEKAVFDAISCLL
        MEDG+KLTKWGY IRTSSD CISAINAFYDQVLSYGRKRSVILEATVHDKDC+LANVL AHFLSSS+PSR H+HLQ AKA LDRATPYEKAVFDAISCL+
Subjt:  MEDGLKLTKWGYEIRTSSDACISAINAFYDQVLSYGRKRSVILEATVHDKDCMLANVLAAHFLSSSNPSRVHHHLQAAKASLDRATPYEKAVFDAISCLL

Query:  SNDRDDNVAVELHTELLKNFPKDLMSLKRAQMLCFYLGSADISLALVQQVLPQNQEEGFIYGMLAFPLLELGCMEEAEKAARKGLDINKKDGWAQHALCH
        SNDRDDNVAVELHTELLKNFPKDL SLKRAQ+LCFYLGSAD+SLALVQQVLPQNQEEGFIYGMLAFPLLELGCMEEAEKAAR+GLDINKKDGWAQHALCH
Subjt:  SNDRDDNVAVELHTELLKNFPKDLMSLKRAQMLCFYLGSADISLALVQQVLPQNQEEGFIYGMLAFPLLELGCMEEAEKAARKGLDINKKDGWAQHALCH

Query:  ILQYRCHFKEAVEFMEACSPSWSDCLSFMVTHNWWHVTLCYLEANSPLSKILELYDNHIWKELEKPDAMRPDVYLNALGLMLRLFVRGDFDPCEGRLKIL
        +LQYRCHFKEAVEFME CSPSW DC+SFMVTHNWWHV LCYLEANSPLSKILE+YDN+IWKELEKPDA+ P+VYLNALGLMLRLFVRG++DPCEGRLKIL
Subjt:  ILQYRCHFKEAVEFMEACSPSWSDCLSFMVTHNWWHVTLCYLEANSPLSKILELYDNHIWKELEKPDAMRPDVYLNALGLMLRLFVRGDFDPCEGRLKIL

Query:  ANVLTDKANWHLDWHFDVLISWALAKAGENFAAEELLGSLKSRFVQCSLIAFLFIYMYVSLWLFVYCYRLFLCRLLKMTPQKREKMQRGMLV
        ANVLTDKANWHL+WHFD+L  WALAKAGE FAA+ELLGSLKS                               RL KMT +KREKMQR +L+
Subjt:  ANVLTDKANWHLDWHFDVLISWALAKAGENFAAEELLGSLKSRFVQCSLIAFLFIYMYVSLWLFVYCYRLFLCRLLKMTPQKREKMQRGMLV

A0A6J1GYC7 Tetratricopeptide repeat protein 383.2e-18680.87Show/hide
Query:  MEDGLKLTKWGYEIRTSSDACISAINAFYDQVLSYGRKRSVILEATVHDKDCMLANVLAAHFLSSSNPSRVHHHLQAAKASLDRATPYEKAVFDAISCLL
        MEDGLKLTKWGYE+RTSSDACISAINAFYDQVLSYGR+RSVILEA VHDK C+LANV AA+FLSSS+PSRVHHHLQAAK  LDRATPYEKAV+DAI+CL+
Subjt:  MEDGLKLTKWGYEIRTSSDACISAINAFYDQVLSYGRKRSVILEATVHDKDCMLANVLAAHFLSSSNPSRVHHHLQAAKASLDRATPYEKAVFDAISCLL

Query:  SNDRDDNVAVELHTELLKNFPKDLMSLKRAQMLCFYLGSADISLALVQQVLPQNQEEGFIYGMLAFPLLELGCMEEAEKAARKGLDINKKDGWAQHALCH
        SNDRDDNVAVEL T+LLK+FPKDL+SLK+AQ+LCFY+G+ D+SLALVQQVLPQNQEEGFIYGMLAFPLLELGCMEEAEKAAR+GLDINKKDGWAQHALCH
Subjt:  SNDRDDNVAVELHTELLKNFPKDLMSLKRAQMLCFYLGSADISLALVQQVLPQNQEEGFIYGMLAFPLLELGCMEEAEKAARKGLDINKKDGWAQHALCH

Query:  ILQYRCHFKEAVEFMEACSPSWSDCLSFMVTHNWWHVTLCYLEANSPLSKILELYDNHIWKELEKPDAMRPDVYLNALGLMLRLFVRGDFDPCEGRLKIL
        +LQYRC FKEAVEFMEACSP+WSDCLSF+VTHNWWHV LCYLEANSPLSKILE+YDN+IWKELEKPDAM PDVYLNALGLMLRLFVRG+F PCEGRLKIL
Subjt:  ILQYRCHFKEAVEFMEACSPSWSDCLSFMVTHNWWHVTLCYLEANSPLSKILELYDNHIWKELEKPDAMRPDVYLNALGLMLRLFVRGDFDPCEGRLKIL

Query:  ANVLTDKANWHLDWHFDVLISWALAKAGENFAAEELLGSLKSRFVQCSLIAFLFIYMYVSLWLFVYCYRLFLCRLLKMTPQKREKMQRGMLV
        ANVLTDKANWHL+WHFD+L +WALAK+GE FAAEELLGSLKS                               R+LKMTP+K+EKMQRGML+
Subjt:  ANVLTDKANWHLDWHFDVLISWALAKAGENFAAEELLGSLKSRFVQCSLIAFLFIYMYVSLWLFVYCYRLFLCRLLKMTPQKREKMQRGMLV

A0A6J1H084 Tetratricopeptide repeat protein 383.2e-18680.87Show/hide
Query:  MEDGLKLTKWGYEIRTSSDACISAINAFYDQVLSYGRKRSVILEATVHDKDCMLANVLAAHFLSSSNPSRVHHHLQAAKASLDRATPYEKAVFDAISCLL
        MEDGLKLTKWGYE+RTSSDACISAINAFYDQVLSYGR+RSVILEA VHDK C+LANV AA+FLSSS+PSRVHHHLQAAK  LDRATPYEKAV+DAI+CL+
Subjt:  MEDGLKLTKWGYEIRTSSDACISAINAFYDQVLSYGRKRSVILEATVHDKDCMLANVLAAHFLSSSNPSRVHHHLQAAKASLDRATPYEKAVFDAISCLL

Query:  SNDRDDNVAVELHTELLKNFPKDLMSLKRAQMLCFYLGSADISLALVQQVLPQNQEEGFIYGMLAFPLLELGCMEEAEKAARKGLDINKKDGWAQHALCH
        SNDRDDNVAVEL T+LLK+FPKDL+SLK+AQ+LCFY+G+ D+SLALVQQVLPQNQEEGFIYGMLAFPLLELGCMEEAEKAAR+GLDINKKDGWAQHALCH
Subjt:  SNDRDDNVAVELHTELLKNFPKDLMSLKRAQMLCFYLGSADISLALVQQVLPQNQEEGFIYGMLAFPLLELGCMEEAEKAARKGLDINKKDGWAQHALCH

Query:  ILQYRCHFKEAVEFMEACSPSWSDCLSFMVTHNWWHVTLCYLEANSPLSKILELYDNHIWKELEKPDAMRPDVYLNALGLMLRLFVRGDFDPCEGRLKIL
        +LQYRC FKEAVEFMEACSP+WSDCLSF+VTHNWWHV LCYLEANSPLSKILE+YDN+IWKELEKPDAM PDVYLNALGLMLRLFVRG+F PCEGRLKIL
Subjt:  ILQYRCHFKEAVEFMEACSPSWSDCLSFMVTHNWWHVTLCYLEANSPLSKILELYDNHIWKELEKPDAMRPDVYLNALGLMLRLFVRGDFDPCEGRLKIL

Query:  ANVLTDKANWHLDWHFDVLISWALAKAGENFAAEELLGSLKSRFVQCSLIAFLFIYMYVSLWLFVYCYRLFLCRLLKMTPQKREKMQRGMLV
        ANVLTDKANWHL+WHFD+L +WALAK+GE FAAEELLGSLKS                               R+LKMTP+K+EKMQRGML+
Subjt:  ANVLTDKANWHLDWHFDVLISWALAKAGENFAAEELLGSLKSRFVQCSLIAFLFIYMYVSLWLFVYCYRLFLCRLLKMTPQKREKMQRGMLV

A0A6J1INE6 Tetratricopeptide repeat protein 385.5e-18680.61Show/hide
Query:  MEDGLKLTKWGYEIRTSSDACISAINAFYDQVLSYGRKRSVILEATVHDKDCMLANVLAAHFLSSSNPSRVHHHLQAAKASLDRATPYEKAVFDAISCLL
        MEDGLKLTKWGYE+ TSSD+CISAINAFYDQVLSYGR+RSVILEA VHDKDC+LANV AA+FLSSS+PSRVHHHLQAAKA LDRATPYEKAV+DAISCL+
Subjt:  MEDGLKLTKWGYEIRTSSDACISAINAFYDQVLSYGRKRSVILEATVHDKDCMLANVLAAHFLSSSNPSRVHHHLQAAKASLDRATPYEKAVFDAISCLL

Query:  SNDRDDNVAVELHTELLKNFPKDLMSLKRAQMLCFYLGSADISLALVQQVLPQNQEEGFIYGMLAFPLLELGCMEEAEKAARKGLDINKKDGWAQHALCH
        SNDRDDNVAVEL T+LLK+FPKDL+SLK+AQ+LCFY+G+ D+SLALVQQVLPQNQEEGFIYGMLAFPLLE+GCMEEAEKAA++GLDINKKDGWAQHALCH
Subjt:  SNDRDDNVAVELHTELLKNFPKDLMSLKRAQMLCFYLGSADISLALVQQVLPQNQEEGFIYGMLAFPLLELGCMEEAEKAARKGLDINKKDGWAQHALCH

Query:  ILQYRCHFKEAVEFMEACSPSWSDCLSFMVTHNWWHVTLCYLEANSPLSKILELYDNHIWKELEKPDAMRPDVYLNALGLMLRLFVRGDFDPCEGRLKIL
        +LQYRC FKEAVEFMEACSP+WSDCLSF+VTHNWWHV LCYLEANSPLSKILE+YDN+IWKELEKPDAM PDVYLNALGLMLRLFVRG+F PCEGRLKIL
Subjt:  ILQYRCHFKEAVEFMEACSPSWSDCLSFMVTHNWWHVTLCYLEANSPLSKILELYDNHIWKELEKPDAMRPDVYLNALGLMLRLFVRGDFDPCEGRLKIL

Query:  ANVLTDKANWHLDWHFDVLISWALAKAGENFAAEELLGSLKSRFVQCSLIAFLFIYMYVSLWLFVYCYRLFLCRLLKMTPQKREKMQRGMLV
        ANVLTDKANWHL+WHFD+L +WALAK+GE FAAEELLGSLKS                               R+LKMTP+K+EKMQRGML+
Subjt:  ANVLTDKANWHLDWHFDVLISWALAKAGENFAAEELLGSLKSRFVQCSLIAFLFIYMYVSLWLFVYCYRLFLCRLLKMTPQKREKMQRGMLV

A0A6J1IPU9 Tetratricopeptide repeat protein 385.5e-18680.61Show/hide
Query:  MEDGLKLTKWGYEIRTSSDACISAINAFYDQVLSYGRKRSVILEATVHDKDCMLANVLAAHFLSSSNPSRVHHHLQAAKASLDRATPYEKAVFDAISCLL
        MEDGLKLTKWGYE+ TSSD+CISAINAFYDQVLSYGR+RSVILEA VHDKDC+LANV AA+FLSSS+PSRVHHHLQAAKA LDRATPYEKAV+DAISCL+
Subjt:  MEDGLKLTKWGYEIRTSSDACISAINAFYDQVLSYGRKRSVILEATVHDKDCMLANVLAAHFLSSSNPSRVHHHLQAAKASLDRATPYEKAVFDAISCLL

Query:  SNDRDDNVAVELHTELLKNFPKDLMSLKRAQMLCFYLGSADISLALVQQVLPQNQEEGFIYGMLAFPLLELGCMEEAEKAARKGLDINKKDGWAQHALCH
        SNDRDDNVAVEL T+LLK+FPKDL+SLK+AQ+LCFY+G+ D+SLALVQQVLPQNQEEGFIYGMLAFPLLE+GCMEEAEKAA++GLDINKKDGWAQHALCH
Subjt:  SNDRDDNVAVELHTELLKNFPKDLMSLKRAQMLCFYLGSADISLALVQQVLPQNQEEGFIYGMLAFPLLELGCMEEAEKAARKGLDINKKDGWAQHALCH

Query:  ILQYRCHFKEAVEFMEACSPSWSDCLSFMVTHNWWHVTLCYLEANSPLSKILELYDNHIWKELEKPDAMRPDVYLNALGLMLRLFVRGDFDPCEGRLKIL
        +LQYRC FKEAVEFMEACSP+WSDCLSF+VTHNWWHV LCYLEANSPLSKILE+YDN+IWKELEKPDAM PDVYLNALGLMLRLFVRG+F PCEGRLKIL
Subjt:  ILQYRCHFKEAVEFMEACSPSWSDCLSFMVTHNWWHVTLCYLEANSPLSKILELYDNHIWKELEKPDAMRPDVYLNALGLMLRLFVRGDFDPCEGRLKIL

Query:  ANVLTDKANWHLDWHFDVLISWALAKAGENFAAEELLGSLKSRFVQCSLIAFLFIYMYVSLWLFVYCYRLFLCRLLKMTPQKREKMQRGMLV
        ANVLTDKANWHL+WHFD+L +WALAK+GE FAAEELLGSLKS                               R+LKMTP+K+EKMQRGML+
Subjt:  ANVLTDKANWHLDWHFDVLISWALAKAGENFAAEELLGSLKSRFVQCSLIAFLFIYMYVSLWLFVYCYRLFLCRLLKMTPQKREKMQRGMLV

SwissProt top hitse value%identityAlignment
Q5R3I4 Tetratricopeptide repeat protein 383.0e-1930.98Show/hide
Query:  AVELHTELLKNFPKDLMSLKRAQMLCFYLGSADISLALVQQV----LPQNQEEGFIYGMLAFPLLELGCMEEAEKAARKGLDINKKDGWAQHALCHILQY
        A EL  ++L++ P D+++LK +    FYLG  +     V ++     P      ++ G+ +F L+E    ++AEK A++ L IN  D W+ H + HI + 
Subjt:  AVELHTELLKNFPKDLMSLKRAQMLCFYLGSADISLALVQQV----LPQNQEEGFIYGMLAFPLLELGCMEEAEKAARKGLDINKKDGWAQHALCHILQY

Query:  RCHFKEAVEFMEACSPSWSDCLSFMVTHNWWHVTLCYLEANSPLSKILELYDNHIWKELEKPDAMRPDVYLNALGLMLRLFVRG
        +   K+ +EFM+     W D    +  HN+WH  L YL         L +YD HI   L+  DAM  DV +++  ++ RL + G
Subjt:  RCHFKEAVEFMEACSPSWSDCLSFMVTHNWWHVTLCYLEANSPLSKILELYDNHIWKELEKPDAMRPDVYLNALGLMLRLFVRG

Arabidopsis top hitse value%identityAlignment
AT1G27110.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.4e-11155.52Show/hide
Query:  MEDGLKLTKWGYEIRTSSDACISAINAFYDQVLSYGRKRSVILEATVHDKDCMLANVLAAHFLSSSNPSRVHHHLQAAKASLDRATPYEKAVFDAISCLL
        M++  +    GYE+ TSSD CI++IN++ DQVL YGR++ VILEA  +D DC+LAN+LAAH+LSS +P R   +  AA++ L +AT YEKAVF+A+S LL
Subjt:  MEDGLKLTKWGYEIRTSSDACISAINAFYDQVLSYGRKRSVILEATVHDKDCMLANVLAAHFLSSSNPSRVHHHLQAAKASLDRATPYEKAVFDAISCLL

Query:  SNDRDDNVAVELHTELLKNFPKDLMSLKRAQMLCFYLGSADISLALVQQVLPQNQEEGFIYGMLAFPLLELGCMEEAEKAARKGLDINKKDGWAQHALCH
        S + DD+VA+ELH++LLK FPKDL+S KR + LC Y+G  D+SL L +++LPQN+ + ++ GMLAF L+ELG + EAE+AARKG +IN+ D WA HALCH
Subjt:  SNDRDDNVAVELHTELLKNFPKDLMSLKRAQMLCFYLGSADISLALVQQVLPQNQEEGFIYGMLAFPLLELGCMEEAEKAARKGLDINKKDGWAQHALCH

Query:  ILQYRCHFKEAVEFMEACSPSWSDCLSFMVTHNWWHVTLCYLEANSPLSKILELYDNHIWKELEKPDAMRPDVYLNALGLMLRLFVRGDFDP-CEGRLKI
        +LQ  C FKEAV+FME  S SW  C S   +HNWWHV +CYLE  S +SK+ E+YD+ +WKELEK DA+  DVY +ALGL+LRL  RG  D   + RL+ 
Subjt:  ILQYRCHFKEAVEFMEACSPSWSDCLSFMVTHNWWHVTLCYLEANSPLSKILELYDNHIWKELEKPDAMRPDVYLNALGLMLRLFVRGDFDP-CEGRLKI

Query:  LANVLTDKANWHLDWHFDVLISWALAKAGENFAAEELLGSLKSR
        LA+ LTDKA W+ DW FD+   WAL+K  +   A ELL  LKSR
Subjt:  LANVLTDKANWHLDWHFDVLISWALAKAGENFAAEELLGSLKSR

AT1G27110.2 Tetratricopeptide repeat (TPR)-like superfamily protein3.4e-11155.52Show/hide
Query:  MEDGLKLTKWGYEIRTSSDACISAINAFYDQVLSYGRKRSVILEATVHDKDCMLANVLAAHFLSSSNPSRVHHHLQAAKASLDRATPYEKAVFDAISCLL
        M++  +    GYE+ TSSD CI++IN++ DQVL YGR++ VILEA  +D DC+LAN+LAAH+LSS +P R   +  AA++ L +AT YEKAVF+A+S LL
Subjt:  MEDGLKLTKWGYEIRTSSDACISAINAFYDQVLSYGRKRSVILEATVHDKDCMLANVLAAHFLSSSNPSRVHHHLQAAKASLDRATPYEKAVFDAISCLL

Query:  SNDRDDNVAVELHTELLKNFPKDLMSLKRAQMLCFYLGSADISLALVQQVLPQNQEEGFIYGMLAFPLLELGCMEEAEKAARKGLDINKKDGWAQHALCH
        S + DD+VA+ELH++LLK FPKDL+S KR + LC Y+G  D+SL L +++LPQN+ + ++ GMLAF L+ELG + EAE+AARKG +IN+ D WA HALCH
Subjt:  SNDRDDNVAVELHTELLKNFPKDLMSLKRAQMLCFYLGSADISLALVQQVLPQNQEEGFIYGMLAFPLLELGCMEEAEKAARKGLDINKKDGWAQHALCH

Query:  ILQYRCHFKEAVEFMEACSPSWSDCLSFMVTHNWWHVTLCYLEANSPLSKILELYDNHIWKELEKPDAMRPDVYLNALGLMLRLFVRGDFDP-CEGRLKI
        +LQ  C FKEAV+FME  S SW  C S   +HNWWHV +CYLE  S +SK+ E+YD+ +WKELEK DA+  DVY +ALGL+LRL  RG  D   + RL+ 
Subjt:  ILQYRCHFKEAVEFMEACSPSWSDCLSFMVTHNWWHVTLCYLEANSPLSKILELYDNHIWKELEKPDAMRPDVYLNALGLMLRLFVRGDFDP-CEGRLKI

Query:  LANVLTDKANWHLDWHFDVLISWALAKAGENFAAEELLGSLKSR
        LA+ LTDKA W+ DW FD+   WAL+K  +   A ELL  LKSR
Subjt:  LANVLTDKANWHLDWHFDVLISWALAKAGENFAAEELLGSLKSR

AT1G27110.3 Tetratricopeptide repeat (TPR)-like superfamily protein2.9e-7856.67Show/hide
Query:  DDNVAVELHTELLKNFPKDLMSLKRAQMLCFYLGSADISLALVQQVLPQNQEEGFIYGMLAFPLLELGCMEEAEKAARKGLDINKKDGWAQHALCHILQY
        DD+VA+ELH++LLK FPKDL+S KR + LC Y+G  D+SL L +++LPQN+ + ++ GMLAF L+ELG + EAE+AARKG +IN+ D WA HALCH+LQ 
Subjt:  DDNVAVELHTELLKNFPKDLMSLKRAQMLCFYLGSADISLALVQQVLPQNQEEGFIYGMLAFPLLELGCMEEAEKAARKGLDINKKDGWAQHALCHILQY

Query:  RCHFKEAVEFMEACSPSWSDCLSFMVTHNWWHVTLCYLEANSPLSKILELYDNHIWKELEKPDAMRPDVYLNALGLMLRLFVRGDFDP-CEGRLKILANV
         C FKEAV+FME  S SW  C S   +HNWWHV +CYLE  S +SK+ E+YD+ +WKELEK DA+  DVY +ALGL+LRL  RG  D   + RL+ LA+ 
Subjt:  RCHFKEAVEFMEACSPSWSDCLSFMVTHNWWHVTLCYLEANSPLSKILELYDNHIWKELEKPDAMRPDVYLNALGLMLRLFVRGDFDP-CEGRLKILANV

Query:  LTDKANWHLDWHFDVLISWALAKAGENFAAEELLGSLKSR
        LTDKA W+ DW FD+   WAL+K  +   A ELL  LKSR
Subjt:  LTDKANWHLDWHFDVLISWALAKAGENFAAEELLGSLKSR

AT1G27150.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.8e-13464.14Show/hide
Query:  MEDGLKLTKWGYEIRTSSDACISAINAFYDQVLSYGRKRSVILEATVHDKDCMLANVLAAHFLSSSNPSRVHHHLQAAKASLDRATPYEKAVFDAISCLL
        ME  ++  +WGYE+ TSSDACI AIN+++ QVLSYGRKR VILEA ++DKDC+L ++LAAHFLSSS+PSR + +++AA ++L+++TPYEKAV++A++ L+
Subjt:  MEDGLKLTKWGYEIRTSSDACISAINAFYDQVLSYGRKRSVILEATVHDKDCMLANVLAAHFLSSSNPSRVHHHLQAAKASLDRATPYEKAVFDAISCLL

Query:  SNDRDDNVAVELHTELLKNFPKDLMSLKRAQMLCFYLGSADISLALVQQVLPQNQEEGFIYGMLAFPLLELGCMEEAEKAARKGLDINKKDGWAQHALCH
        S DRDD++A E+HT+LLK FPKDL SLKRAQ+L FY+G  D  L LVQQVLP NQEE +I+G+LAFPLLELG MEEA  A+RKG +INK+D WA H LCH
Subjt:  SNDRDDNVAVELHTELLKNFPKDLMSLKRAQMLCFYLGSADISLALVQQVLPQNQEEGFIYGMLAFPLLELGCMEEAEKAARKGLDINKKDGWAQHALCH

Query:  ILQYRCHFKEAVEFMEACSPSWSDCLSFMVTHNWWHVTLCYLEANSPLSKILELYDNHIWKELEKPDAMRPDVYLNALGLMLRLFVRGDFDPCEGRLKIL
        +LQ+ C FKEAVEFMEA + +W  C SFM THNWWHV LCYLE  SP+SK+ E+YD+HIWKELEK DA+ P+VYLNALGL++RL VR   D  E RLK L
Subjt:  ILQYRCHFKEAVEFMEACSPSWSDCLSFMVTHNWWHVTLCYLEANSPLSKILELYDNHIWKELEKPDAMRPDVYLNALGLMLRLFVRGDFDPCEGRLKIL

Query:  ANVLTDKANWHLDWHFDVLISWALAKAGENFAAEELLGSLKSR
        A  LT++ANW+L+WH D+LI WALAK GE   A ELL  LK R
Subjt:  ANVLTDKANWHLDWHFDVLISWALAKAGENFAAEELLGSLKSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGACGGACTGAAATTGACCAAATGGGGTTATGAAATTAGAACATCATCCGACGCTTGCATCTCCGCCATTAATGCATTCTATGACCAGGTGCTTAGTTACGGGAG
GAAGAGGTCTGTGATTCTGGAGGCTACTGTTCACGACAAAGACTGTATGCTTGCGAATGTTTTGGCTGCTCATTTTCTTTCATCGTCCAATCCTTCACGAGTTCATCATC
ATCTCCAAGCAGCCAAGGCCAGTCTGGATCGTGCAACCCCATATGAGAAAGCCGTTTTCGATGCTATCAGTTGTTTGTTGTCCAACGACAGAGACGATAATGTTGCTGTT
GAGCTGCACACTGAGCTGCTTAAAAATTTTCCAAAGGATCTAATGTCTTTGAAAAGGGCTCAAATGCTATGCTTTTACTTGGGAAGTGCTGATATATCTTTGGCATTGGT
TCAACAGGTTTTACCCCAAAATCAGGAAGAAGGTTTCATTTATGGCATGCTTGCTTTTCCTTTGTTGGAACTTGGCTGCATGGAAGAAGCTGAGAAGGCCGCAAGAAAGG
GACTTGATATCAACAAGAAAGATGGTTGGGCACAGCATGCGTTATGCCATATTCTTCAATATAGATGTCATTTTAAAGAAGCGGTTGAGTTTATGGAAGCATGCTCGCCT
TCATGGAGTGACTGTTTATCATTCATGGTGACACATAATTGGTGGCATGTGACACTCTGTTACCTAGAAGCCAATTCTCCGTTGAGTAAAATCCTTGAATTATATGACAA
CCATATATGGAAGGAGTTGGAAAAACCTGATGCTATGAGACCAGATGTATACTTGAATGCCCTTGGTTTGATGTTGCGGTTGTTTGTGCGTGGTGACTTCGATCCATGTG
AGGGGCGTTTGAAGATCTTGGCCAATGTTTTAACTGATAAAGCTAACTGGCATCTAGACTGGCACTTTGACGTATTGATATCATGGGCTCTGGCTAAGGCTGGAGAGAAT
TTTGCAGCAGAAGAGTTACTTGGGAGCTTGAAGTCCCGGTTCGTACAGTGTTCTCTCATTGCATTCTTATTTATTTACATGTATGTGTCTTTATGGCTCTTTGTTTACTG
TTATCGGCTGTTTTTGTGTAGATTGTTGAAAATGACTCCGCAGAAACGAGAAAAGATGCAAAGAGGAATGCTGGTTTGTTTCCTTTTTCTAGTCTCATATATAGGTTACC
TTCCTTCAGTTTGA
mRNA sequenceShow/hide mRNA sequence
GAAAAATGCGTGCGTGGAGGAGGTGATGCCGCCGTCGCAGATTTGGCTTAAAACCAAGTCGCTCTCTCAGAAATCAGAACGCAAGCAATTAGCTAATGCTATTTTATGGA
AAGGAACTCCTCAAAAACGACAACCCTTGTCATTCTCGCACGTTCTTTTCCTTCCTTTCACATTATATATATTTGCGATTTGGACCGACATGGGCTTCTTTCATTTTCGT
CGCCTTGGCTACGATCAATCAGACCCACGTCGGATTTGGAGATTAGTCTTCTGCGCCGAGAACCATGGAAGACGGACTGAAATTGACCAAATGGGGTTATGAAATTAGAA
CATCATCCGACGCTTGCATCTCCGCCATTAATGCATTCTATGACCAGGTGCTTAGTTACGGGAGGAAGAGGTCTGTGATTCTGGAGGCTACTGTTCACGACAAAGACTGT
ATGCTTGCGAATGTTTTGGCTGCTCATTTTCTTTCATCGTCCAATCCTTCACGAGTTCATCATCATCTCCAAGCAGCCAAGGCCAGTCTGGATCGTGCAACCCCATATGA
GAAAGCCGTTTTCGATGCTATCAGTTGTTTGTTGTCCAACGACAGAGACGATAATGTTGCTGTTGAGCTGCACACTGAGCTGCTTAAAAATTTTCCAAAGGATCTAATGT
CTTTGAAAAGGGCTCAAATGCTATGCTTTTACTTGGGAAGTGCTGATATATCTTTGGCATTGGTTCAACAGGTTTTACCCCAAAATCAGGAAGAAGGTTTCATTTATGGC
ATGCTTGCTTTTCCTTTGTTGGAACTTGGCTGCATGGAAGAAGCTGAGAAGGCCGCAAGAAAGGGACTTGATATCAACAAGAAAGATGGTTGGGCACAGCATGCGTTATG
CCATATTCTTCAATATAGATGTCATTTTAAAGAAGCGGTTGAGTTTATGGAAGCATGCTCGCCTTCATGGAGTGACTGTTTATCATTCATGGTGACACATAATTGGTGGC
ATGTGACACTCTGTTACCTAGAAGCCAATTCTCCGTTGAGTAAAATCCTTGAATTATATGACAACCATATATGGAAGGAGTTGGAAAAACCTGATGCTATGAGACCAGAT
GTATACTTGAATGCCCTTGGTTTGATGTTGCGGTTGTTTGTGCGTGGTGACTTCGATCCATGTGAGGGGCGTTTGAAGATCTTGGCCAATGTTTTAACTGATAAAGCTAA
CTGGCATCTAGACTGGCACTTTGACGTATTGATATCATGGGCTCTGGCTAAGGCTGGAGAGAATTTTGCAGCAGAAGAGTTACTTGGGAGCTTGAAGTCCCGGTTCGTAC
AGTGTTCTCTCATTGCATTCTTATTTATTTACATGTATGTGTCTTTATGGCTCTTTGTTTACTGTTATCGGCTGTTTTTGTGTAGATTGTTGAAAATGACTCCGCAGAAA
CGAGAAAAGATGCAAAGAGGAATGCTGGTTTGTTTCCTTTTTCTAGTCTCATATATAGGTTACCTTCCTTCAGTTTGA
Protein sequenceShow/hide protein sequence
MEDGLKLTKWGYEIRTSSDACISAINAFYDQVLSYGRKRSVILEATVHDKDCMLANVLAAHFLSSSNPSRVHHHLQAAKASLDRATPYEKAVFDAISCLLSNDRDDNVAV
ELHTELLKNFPKDLMSLKRAQMLCFYLGSADISLALVQQVLPQNQEEGFIYGMLAFPLLELGCMEEAEKAARKGLDINKKDGWAQHALCHILQYRCHFKEAVEFMEACSP
SWSDCLSFMVTHNWWHVTLCYLEANSPLSKILELYDNHIWKELEKPDAMRPDVYLNALGLMLRLFVRGDFDPCEGRLKILANVLTDKANWHLDWHFDVLISWALAKAGEN
FAAEELLGSLKSRFVQCSLIAFLFIYMYVSLWLFVYCYRLFLCRLLKMTPQKREKMQRGMLVCFLFLVSYIGYLPSV