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Lsi04G004970 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G004970
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr04:4599581..4601203
RNA-Seq ExpressionLsi04G004970
SyntenyLsi04G004970
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601393.1 Phospholipid-transporting ATPase 3, partial [Cucurbita argyrosperma subsp. sororia]9.5e-0467.44Show/hide
Query:  LGAVVVGLFVWLLIIGSPTPGRTTS--WPEAESEVE-GSHVMK
        L AV VGLF+W+L +GSP PG+TTS  WP A SEVE GS VMK
Subjt:  LGAVVVGLFVWLLIIGSPTPGRTTS--WPEAESEVE-GSHVMK

KAG7030819.1 hypothetical protein SDJN02_04856, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-1356.04Show/hide
Query:  RNHSCCYFSYLKVLLGAVVVGLFVWLLIIGSPTPG-----RTTSWPEAESEVEGSHVMKPAKEL-----------ANNNHPKRIGVKGGPP
        R  SCC FSY KVLLGAV VG+FVWLLI+G P  G     +TTSWP A SE EGSH MK AKEL            +  H +R GVKG PP
Subjt:  RNHSCCYFSYLKVLLGAVVVGLFVWLLIIGSPTPG-----RTTSWPEAESEVEGSHVMKPAKEL-----------ANNNHPKRIGVKGGPP

XP_011655655.1 uncharacterized protein LOC105435565 [Cucumis sativus]8.8e-1858.25Show/hide
Query:  SCCYFSYLKVLLGAVVVGLFVWLLIIGS--PTPGRTTSW---PEAESEVEGSHVMKPAK-ELANNNHPK----------------------RIGVKGGPP
        SCCYFSYLKVLLGAVVVGLFVWLL++GS  P PGRT SW    E+  +VEG H MK A+ +LA NNHPK                      RIGVKGGPP
Subjt:  SCCYFSYLKVLLGAVVVGLFVWLLIIGS--PTPGRTTSW---PEAESEVEGSHVMKPAK-ELANNNHPK----------------------RIGVKGGPP

Query:  RGA
        RGA
Subjt:  RGA

XP_038891924.1 uncharacterized protein LOC120081268 [Benincasa hispida]1.2e-2269.07Show/hide
Query:  SCCYFSYLKVLLGAVVVGLFVWLLIIGSPTPGRTTS-WPEAESEVEGSHVMKPAKELANNNHPK---------------------RIGVKGGPPRGA
        SC YFSYLKVLLGAVVVGLFVWLLI+GS  PGRTTS  P AESEVEGSHVMK A+ELANNNHPK                     RIGVKGGPPRGA
Subjt:  SCCYFSYLKVLLGAVVVGLFVWLLIIGSPTPGRTTS-WPEAESEVEGSHVMKPAKELANNNHPK---------------------RIGVKGGPPRGA

TrEMBL top hitse value%identityAlignment
A0A0A0KQF7 Uncharacterized protein4.3e-1858.25Show/hide
Query:  SCCYFSYLKVLLGAVVVGLFVWLLIIGS--PTPGRTTSW---PEAESEVEGSHVMKPAK-ELANNNHPK----------------------RIGVKGGPP
        SCCYFSYLKVLLGAVVVGLFVWLL++GS  P PGRT SW    E+  +VEG H MK A+ +LA NNHPK                      RIGVKGGPP
Subjt:  SCCYFSYLKVLLGAVVVGLFVWLLIIGS--PTPGRTTSW---PEAESEVEGSHVMKPAK-ELANNNHPK----------------------RIGVKGGPP

Query:  RGA
        RGA
Subjt:  RGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAATCATAGTTGTTGCTACTTTTCTTACTTGAAGGTCTTGCTTGGAGCTGTGGTTGTGGGGTTGTTTGTATGGCTTTTAATCATTGGGTCGCCGACACCGGGGAG
AACAACAAGCTGGCCGGAAGCTGAGTCTGAGGTTGAGGGAAGCCATGTCATGAAGCCAGCTAAGGAATTGGCCAACAACAACCATCCAAAGAGAATTGGGGTTAAAGGAG
GGCCTCCCAGAGGAGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAAATCATAGTTGTTGCTACTTTTCTTACTTGAAGGTCTTGCTTGGAGCTGTGGTTGTGGGGTTGTTTGTATGGCTTTTAATCATTGGGTCGCCGACACCGGGGAG
AACAACAAGCTGGCCGGAAGCTGAGTCTGAGGTTGAGGGAAGCCATGTCATGAAGCCAGCTAAGGAATTGGCCAACAACAACCATCCAAAGAGAATTGGGGTTAAAGGAG
GGCCTCCCAGAGGAGCTTAGGCTTTGTAGACATAAAGGCATAGATTCCTTCATCCAGTTTCATAGAGCACTTTAAATATTAAGGTTCATTATGAACATTTCTTTTTTCTT
TTTTTCTTTTTTTATTTGGGTAATTTCAAATAAGGGGAAATGTATAAAAATTCTGAATAAATCTGGATTGTATAGAATTGATGCACACTGAACTTTGTAGCTTTTGTAGA
ACACTAACTCTTTCC
Protein sequenceShow/hide protein sequence
MRNHSCCYFSYLKVLLGAVVVGLFVWLLIIGSPTPGRTTSWPEAESEVEGSHVMKPAKELANNNHPKRIGVKGGPPRGA