; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G005130 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G005130
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein PLASTID REDOX INSENSITIVE 2, chloroplastic-like
Genome locationchr04:4766256..4767575
RNA-Seq ExpressionLsi04G005130
SyntenyLsi04G005130
Gene Ontology termsGO:0010468 - regulation of gene expression (biological process)
InterPro domainsIPR039349 - Protein PLASTID REDOX INSENSITIVE 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601379.1 Protein PLASTID REDOX INSENSITIVE 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.4e-7884.83Show/hide
Query:  MAWTSSSSSPSFHLLPSLLPLHKPNLPLSFFSIPSTPFQHTRLLSPTLTLPFQP--SSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDI
        MAWT   + P+FHLLPSL  LHKP  P  FFS PS+  QHTR LSPTL LPFQP  SSSF N IC AAEYKFPDPIPEFAVAETEKFRAHLL KLSKKDI
Subjt:  MAWTSSSSSPSFHLLPSLLPLHKPNLPLSFFSIPSTPFQHTRLLSPTLTLPFQP--SSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDI

Query:  YGDSVQEVVGICTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGT
        YGDSVQEVVG+CTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQ+HVDKDWN WTGDDGT
Subjt:  YGDSVQEVVGICTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGT

XP_022956596.1 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like [Cucurbita moschata]9.9e-7884.75Show/hide
Query:  MAWTSSSSSPSFHLLPSLLPLHKPNLPLSFFSIPSTPFQHTRLLSPTLTLPFQP-SSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIY
        MAWT   + P+FHLLP L  LHKP  P  FFS PS+  QHTR LSPTL LPFQP SSSF N IC AAEYKFPDPIPEFAVAETEKFRAHLL KLSKKDIY
Subjt:  MAWTSSSSSPSFHLLPSLLPLHKPNLPLSFFSIPSTPFQHTRLLSPTLTLPFQP-SSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIY

Query:  GDSVQEVVGICTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGT
        GDSVQEVVG+CTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQ+HVDKDWN WTGDDGT
Subjt:  GDSVQEVVGICTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGT

XP_022997795.1 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like [Cucurbita maxima]5.2e-7984.66Show/hide
Query:  MAWTSSSSSPSFHLLPSLLPLHKPNLPLSFFSIPSTPFQHTRLLSPTLTLPFQPSSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYG
        MAWT   + P+FHLLP L  LHKP  P  FFS PS+  QHTR LSPTL LPFQPSSSF N IC AAEYKFPDPIPEFA+AETEKFRAHLL KLSKKDIYG
Subjt:  MAWTSSSSSPSFHLLPSLLPLHKPNLPLSFFSIPSTPFQHTRLLSPTLTLPFQPSSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYG

Query:  DSVQEVVGICTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGT
        DSVQEVVG+CTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQ+HVDKDWN WTGDDGT
Subjt:  DSVQEVVGICTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGT

XP_023549642.1 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like [Cucurbita pepo subsp. pepo]1.1e-7985.8Show/hide
Query:  MAWTSSSSSPSFHLLPSLLPLHKPNLPLSFFSIPSTPFQHTRLLSPTLTLPFQPSSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYG
        MAWT   + P+FHLLP L  LHKPN P  FFS PS+  QHTR LSPTL LPFQPSSSF N IC AAEYKFPDPIPEFAVAETEKFRAHLL KLSKKDIYG
Subjt:  MAWTSSSSSPSFHLLPSLLPLHKPNLPLSFFSIPSTPFQHTRLLSPTLTLPFQPSSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYG

Query:  DSVQEVVGICTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGT
        DSVQEVVG+CTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQ+HVDKDWN WTGDDGT
Subjt:  DSVQEVVGICTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGT

XP_038891304.1 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like [Benincasa hispida]3.9e-8287.29Show/hide
Query:  MAWTSSSSSPSFHLLP---SLLPLHKPNLPLSFFSIPSTPFQHTRLLSPTLTLPFQP--SSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSK
        M WT+SS   SFHLLP   SL PLHKPNLP SFFS PSTP  H RL   TLTLPFQP  SSSFPNHIC AAEYKFPDPIPEFAVAETEKFRAHLLQKLSK
Subjt:  MAWTSSSSSPSFHLLP---SLLPLHKPNLPLSFFSIPSTPFQHTRLLSPTLTLPFQP--SSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSK

Query:  KDIYGDSVQEVVGICTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGT
        KDIYGDSV EVVGICTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWN WTGDD T
Subjt:  KDIYGDSVQEVVGICTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGT

TrEMBL top hitse value%identityAlignment
A0A0A0KTS5 Uncharacterized protein3.4e-7684.27Show/hide
Query:  MAWTSSSSSPSFHLLPSL-LPLHKPNLPLSFFS-IPSTPFQHTRLLSPTLTLPFQPSSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDI
        MAWT  ++SPSF+LLPSL  P HKP+LP SFFS  PSTP +    LSPTLTL   PSSSFP HIC+AAEYKFPDPIPEFAVAETEKFRAHLLQKLSK+DI
Subjt:  MAWTSSSSSPSFHLLPSL-LPLHKPNLPLSFFS-IPSTPFQHTRLLSPTLTLPFQPSSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDI

Query:  YGDSVQEVVGICTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGT
        YGDS+Q+VVGICTEIFNTFMHTEYGGPGTLLVLPFIDMSD INERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDD T
Subjt:  YGDSVQEVVGICTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGT

A0A1S3BEL5 uncharacterized protein LOC1034890372.9e-7584.27Show/hide
Query:  MAWTSSSSSPSFHLLPSL-LPLHKPNLPLSFFS-IPSTPFQHTRLLSPTLTLPFQPSSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDI
        MAWT   +SPSF+LLP L    HKP+LPLSFFS  PS P +    LSPTLTLP   SSSFP HIC+AAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDI
Subjt:  MAWTSSSSSPSFHLLPSL-LPLHKPNLPLSFFS-IPSTPFQHTRLLSPTLTLPFQPSSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDI

Query:  YGDSVQEVVGICTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGT
        YGDS+Q+VVGICTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDD T
Subjt:  YGDSVQEVVGICTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGT

A0A6J1DCY7 protein PLASTID REDOX INSENSITIVE 2-like1.0e-6778.57Show/hide
Query:  SPSFHLLPSLLPLHKPNLPLSFFSIPSTPFQHTRLLSPTLTLPFQPSSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYGDSVQEVVG
        +P  HL PSL+ L    +PL FF  PS P   TR LSPTL LP+         IC AAEYKFPDPIPEFAVAETEKFRAHLL KLSKKD+YGDSV EVVG
Subjt:  SPSFHLLPSLLPLHKPNLPLSFFSIPSTPFQHTRLLSPTLTLPFQPSSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYGDSVQEVVG

Query:  ICTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGT
        ICTEIFNTFMHTEYGGPGTLLV+PFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWN+WTGDDGT
Subjt:  ICTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGT

A0A6J1GWZ9 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like4.8e-7884.75Show/hide
Query:  MAWTSSSSSPSFHLLPSLLPLHKPNLPLSFFSIPSTPFQHTRLLSPTLTLPFQP-SSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIY
        MAWT   + P+FHLLP L  LHKP  P  FFS PS+  QHTR LSPTL LPFQP SSSF N IC AAEYKFPDPIPEFAVAETEKFRAHLL KLSKKDIY
Subjt:  MAWTSSSSSPSFHLLPSLLPLHKPNLPLSFFSIPSTPFQHTRLLSPTLTLPFQP-SSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIY

Query:  GDSVQEVVGICTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGT
        GDSVQEVVG+CTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQ+HVDKDWN WTGDDGT
Subjt:  GDSVQEVVGICTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGT

A0A6J1KAW7 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like2.5e-7984.66Show/hide
Query:  MAWTSSSSSPSFHLLPSLLPLHKPNLPLSFFSIPSTPFQHTRLLSPTLTLPFQPSSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYG
        MAWT   + P+FHLLP L  LHKP  P  FFS PS+  QHTR LSPTL LPFQPSSSF N IC AAEYKFPDPIPEFA+AETEKFRAHLL KLSKKDIYG
Subjt:  MAWTSSSSSPSFHLLPSLLPLHKPNLPLSFFSIPSTPFQHTRLLSPTLTLPFQPSSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYG

Query:  DSVQEVVGICTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGT
        DSVQEVVG+CTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQ+HVDKDWN WTGDDGT
Subjt:  DSVQEVVGICTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGT

SwissProt top hitse value%identityAlignment
B6UFC7 Protein PLASTID REDOX INSENSITIVE 2, chloroplastic4.4e-3661.47Show/hide
Query:  EYKFPDPIPEFAVAETEKFRAHLLQKL--SKKDIYGDSVQEVVGICTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQDHVD
        +YKFPDPIPEFA  ET KFR H+  +L   K+D +GD V+E+V +CTEI  TF+  +Y GPGTLLV PF+DM   I ERGLPG PQAARAA+ WA+ +VD
Subjt:  EYKFPDPIPEFAVAETEKFRAHLLQKL--SKKDIYGDSVQEVVGICTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQDHVD

Query:  KDWNQWTGD
        KDW  WTG+
Subjt:  KDWNQWTGD

Q6H612 Protein PLASTID REDOX INSENSITIVE 2, chloroplastic9.7e-3648.41Show/hide
Query:  LHKPNLPLSFFSIPSTPFQHTRLLSPTLTLPFQPSSSFPNHICSAA--EYKFPDPIPEFAVAETEKFRAHLLQKLSKK--DIYGDSVQEVVGICTEIFNT
        L+ P L LS  S PS+      +L    +   +P+        +AA  +YKFPDPIPEFA  ET KF+ H++ +L +K  D +G+ V+E+V +CTEI  T
Subjt:  LHKPNLPLSFFSIPSTPFQHTRLLSPTLTLPFQPSSSFPNHICSAA--EYKFPDPIPEFAVAETEKFRAHLLQKLSKK--DIYGDSVQEVVGICTEIFNT

Query:  FMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGD
        F+  +Y GPGTLLV PF+DM   I ERGLPG PQAARAA+ WA+ ++DKDW  WTG+
Subjt:  FMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGD

Q9XIK0 Protein PLASTID REDOX INSENSITIVE 2, chloroplastic1.7e-5177.88Show/hide
Query:  ICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYGDSVQEVVGICTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQD
        +C AAEYKFPDPIPEFA AETEKFR H+L KLSK+D++ DSV E+VG+CTEIF TF+ +EYGGPGTLLV+PFIDM+DT+NER LPGGPQAARAA+KWAQD
Subjt:  ICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYGDSVQEVVGICTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQD

Query:  HVDKDWNQWTGDD
        HVDKDW +WTG D
Subjt:  HVDKDWNQWTGDD

Arabidopsis top hitse value%identityAlignment
AT1G10522.1 unknown protein1.2e-5277.88Show/hide
Query:  ICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYGDSVQEVVGICTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQD
        +C AAEYKFPDPIPEFA AETEKFR H+L KLSK+D++ DSV E+VG+CTEIF TF+ +EYGGPGTLLV+PFIDM+DT+NER LPGGPQAARAA+KWAQD
Subjt:  ICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYGDSVQEVVGICTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQD

Query:  HVDKDWNQWTGDD
        HVDKDW +WTG D
Subjt:  HVDKDWNQWTGDD

AT1G10522.2 unknown protein1.2e-5277.88Show/hide
Query:  ICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYGDSVQEVVGICTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQD
        +C AAEYKFPDPIPEFA AETEKFR H+L KLSK+D++ DSV E+VG+CTEIF TF+ +EYGGPGTLLV+PFIDM+DT+NER LPGGPQAARAA+KWAQD
Subjt:  ICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYGDSVQEVVGICTEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQD

Query:  HVDKDWNQWTGDD
        HVDKDW +WTG D
Subjt:  HVDKDWNQWTGDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATGGACTTCTTCTTCTTCTTCTCCTTCTTTCCATCTCCTCCCTTCTCTCCTTCCCCTCCATAAACCCAACCTTCCATTATCCTTCTTCTCCATTCCTTCAACTCC
TTTCCAACACACACGCCTTCTCTCCCCCACTCTCACTCTTCCATTTCAACCCTCCTCCTCCTTCCCAAACCACATTTGCAGCGCCGCCGAATACAAATTTCCCGACCCAA
TTCCCGAATTCGCCGTCGCTGAGACCGAGAAGTTCAGGGCTCATCTCCTTCAAAAGCTCTCTAAGAAAGATATTTACGGGGATTCCGTTCAAGAGGTCGTCGGAATATGC
ACTGAGATATTTAATACCTTTATGCACACCGAGTATGGCGGGCCTGGGACTTTGTTGGTTTTACCTTTCATAGACATGTCTGATACAATCAATGAACGAGGATTACCTGG
AGGCCCTCAAGCTGCTCGTGCTGCAGTCAAATGGGCTCAGGATCATGTTGATAAAGACTGGAACCAGTGGACTGGTGATGATGGTACCTAA
mRNA sequenceShow/hide mRNA sequence
AAAACACTGGTGGGTGCAAATAGATAATCCATCGATAAACCCTTCCTCTACGCTTTCGCTAAGCTAAACCCGTGCAGCAGATAAAGATGGCATGGACTTCTTCTTCTTCT
TCTCCTTCTTTCCATCTCCTCCCTTCTCTCCTTCCCCTCCATAAACCCAACCTTCCATTATCCTTCTTCTCCATTCCTTCAACTCCTTTCCAACACACACGCCTTCTCTC
CCCCACTCTCACTCTTCCATTTCAACCCTCCTCCTCCTTCCCAAACCACATTTGCAGCGCCGCCGAATACAAATTTCCCGACCCAATTCCCGAATTCGCCGTCGCTGAGA
CCGAGAAGTTCAGGGCTCATCTCCTTCAAAAGCTCTCTAAGAAAGATATTTACGGGGATTCCGTTCAAGAGGTCGTCGGAATATGCACTGAGATATTTAATACCTTTATG
CACACCGAGTATGGCGGGCCTGGGACTTTGTTGGTTTTACCTTTCATAGACATGTCTGATACAATCAATGAACGAGGATTACCTGGAGGCCCTCAAGCTGCTCGTGCTGC
AGTCAAATGGGCTCAGGATCATGTTGATAAAGACTGGAACCAGTGGACTGGTGATGATGGTACCTAACACAAGTCCTTCCTGCACCATAATTCATTTTGTTAATCTGATT
TACCAAAGCGATTGTCCAGATATGAGTTCAATTTGTTCTTGAATGAACTATCAGAGATCTAGAGAGGATAACGATAGAATGATAGAACTTGGATGAAAGCAAACGGAAAG
TCTTCATTTTCAACTGGATTGTAGCCGAAAACTTTAGTGTACTGCTAAAATATTAGATGCCTTTATGAGCAATATAAATTGTTTTAGCTGTACGGTAAGATGAGAGCTGT
TATTTAAGTATATCTTGATTTTGAATTATGGATGTTAAACTTATCATTACAGGATGCATAATTTTTTTCGTATCGGAGGAGCCCGAAAATAATATTCCAAAGCTTTGGAT
CTGGTGTATCATAAGGGATTTGCCTCAACCGGATTGAATTTTCACTATTATTTGTATACATTACAGACGAAACAGAAGGACTTCCATTTAAGTTGGGCCAGCCTTTTTCT
GGGGTTTATGTACATATCTTATTATTTATAATTTATAATAATTATATACACTAATTGTTCGATTTTCTGCC
Protein sequenceShow/hide protein sequence
MAWTSSSSSPSFHLLPSLLPLHKPNLPLSFFSIPSTPFQHTRLLSPTLTLPFQPSSSFPNHICSAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYGDSVQEVVGIC
TEIFNTFMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDGT