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Lsi04G005180 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G005180
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr04:4795661..4796113
RNA-Seq ExpressionLsi04G005180
SyntenyLsi04G005180
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030800.1 hypothetical protein SDJN02_04837, partial [Cucurbita argyrosperma subsp. argyrosperma]7.7e-1148.65Show/hide
Query:  MLCNDGLQVFDLAAVAFATGVLIRCLSCLTACNVFFREIIVSSTTSPPADRFSDAVCSFSSDSGSG-----------FLDFAYFLARNTFITSANSKQNV
        MLCNDGLQ F LAAVAFA GVL+RCLSCLT CNV+F EIIV    S   ++    +  FS  SGS             L F    +          +QNV
Subjt:  MLCNDGLQVFDLAAVAFATGVLIRCLSCLTACNVFFREIIVSSTTSPPADRFSDAVCSFSSDSGSG-----------FLDFAYFLARNTFITSANSKQNV

Query:  KRAELIKQKEV
        KRAEL KQKE+
Subjt:  KRAELIKQKEV
TrEMBL top hitse value%identityAlignment
A0A2P2MBP3 Uncharacterized protein LOC1051264461.4e-0548.28Show/hide
Query:  MLCNDGLQVFDLAAVAFATGVLIRCLSCLTACNVFFREIIVSSTTSPPADRFSDA-VCSFSSDSGSGFLDFAYFLARNTFITSANSK
        +LC++G   FDL A     GVL RCLSC  A   F   +      S P   FS A VC+FS+ SG  F  FAYFL  NTFITSA +K
Subjt:  MLCNDGLQVFDLAAVAFATGVLIRCLSCLTACNVFFREIIVSSTTSPPADRFSDA-VCSFSSDSGSGFLDFAYFLARNTFITSANSK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTGCAATGATGGTCTCCAAGTCTTTGACCTCGCCGCAGTGGCGTTTGCTACTGGTGTTCTGATTCGATGTCTTTCATGTTTGACTGCCTGCAATGTTTTTTTCAG
AGAGATTATTGTATCTTCTACTACTTCACCGCCGGCAGATCGCTTCTCTGACGCCGTCTGTAGCTTCTCCTCCGATTCCGGCAGTGGCTTCTTAGATTTTGCATACTTTT
TAGCCCGCAACACCTTCATAACCTCTGCAAATTCCAAACAAAATGTCAAAAGGGCTGAACTTATTAAACAGAAGGAAGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTCTGCAATGATGGTCTCCAAGTCTTTGACCTCGCCGCAGTGGCGTTTGCTACTGGTGTTCTGATTCGATGTCTTTCATGTTTGACTGCCTGCAATGTTTTTTTCAG
AGAGATTATTGTATCTTCTACTACTTCACCGCCGGCAGATCGCTTCTCTGACGCCGTCTGTAGCTTCTCCTCCGATTCCGGCAGTGGCTTCTTAGATTTTGCATACTTTT
TAGCCCGCAACACCTTCATAACCTCTGCAAATTCCAAACAAAATGTCAAAAGGGCTGAACTTATTAAACAGAAGGAAGTGTAA
Protein sequenceShow/hide protein sequence
MLCNDGLQVFDLAAVAFATGVLIRCLSCLTACNVFFREIIVSSTTSPPADRFSDAVCSFSSDSGSGFLDFAYFLARNTFITSANSKQNVKRAELIKQKEV