; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G005630 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G005630
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSignal recognition particle receptor subunit beta
Genome locationchr04:5128316..5130407
RNA-Seq ExpressionLsi04G005630
SyntenyLsi04G005630
Gene Ontology termsGO:0045047 - protein targeting to ER (biological process)
GO:0005785 - signal recognition particle receptor complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR019009 - Signal recognition particle receptor, beta subunit
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK15618.1 signal recognition particle receptor subunit beta-like [Cucumis melo var. makuwa]1.6e-12484.08Show/hide
Query:  MEGTEQWKVQVEQLKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGV--------------------ARFFKRRKSNTIVLSGLGGSGKTVLFYQLRDG
        MEGTEQW       KVQVEQLKVQMEQWLE+GLEFVHQIPPIQLYVGV                    AR FKRRKSNTIVLSGL GSGKT+LFYQLRDG
Subjt:  MEGTEQWKVQVEQLKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGV--------------------ARFFKRRKSNTIVLSGLGGSGKTVLFYQLRDG

Query:  SSHQGTVTSMEPNEGTFVLHSEITKKEKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKT
        SSHQGTVTSMEPNEGTFVLHSEI KK+KLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKT
Subjt:  SSHQGTVTSMEPNEGTFVLHSEITKKEKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKT

Query:  DKVTAHTKEFINRQMEKEIVVFSMLYSDKLRVSRSVISAADISNDFTLGVPGKAFSFTQCHNKVTVAEASGLTGEVSEVEQFIRENVKF
        DKVTAHTKEFINRQMEKEI        DKLRVSRS IS ADISNDFTLG+PGKAFSFTQC+NKV VAEASGLTGEVSEVEQFIRENVKF
Subjt:  DKVTAHTKEFINRQMEKEIVVFSMLYSDKLRVSRSVISAADISNDFTLGVPGKAFSFTQCHNKVTVAEASGLTGEVSEVEQFIRENVKF

XP_004135257.1 signal recognition particle receptor subunit beta [Cucumis sativus]3.0e-12686.83Show/hide
Query:  MEGTEQWKVQVEQLKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGV------------ARFFKRRKSNTIVLSGLGGSGKTVLFYQLRDGSSHQGTVT
        MEGTEQW       KVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGV             R FKRRKSNTIVLSGL GSGKT+LFYQLRDGSSHQGTVT
Subjt:  MEGTEQWKVQVEQLKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGV------------ARFFKRRKSNTIVLSGLGGSGKTVLFYQLRDGSSHQGTVT

Query:  SMEPNEGTFVLHSEITKKEKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTK
        SMEPNEGTFVLHSEI KK+KLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTK
Subjt:  SMEPNEGTFVLHSEITKKEKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTK

Query:  EFINRQMEKEIVVFSMLYSDKLRVSRSVISAADISNDFTLGVPGKAFSFTQCHNKVTVAEASGLTGEVSEVEQFIRENVKF
        EFINRQMEKEI        DKLRVSRS ISAADI+NDFTLG+PGKAFSFTQCHNKV VAEASGLTGEVSEVEQFIRENVKF
Subjt:  EFINRQMEKEIVVFSMLYSDKLRVSRSVISAADISNDFTLGVPGKAFSFTQCHNKVTVAEASGLTGEVSEVEQFIRENVKF

XP_008446189.1 PREDICTED: signal recognition particle receptor subunit beta-like [Cucumis melo]5.7e-12586.12Show/hide
Query:  MEGTEQWKVQVEQLKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGV------------ARFFKRRKSNTIVLSGLGGSGKTVLFYQLRDGSSHQGTVT
        MEGTEQW       KVQVEQLKVQMEQWLE+GLEFVHQIPPIQLYVGV             R FKRRKSNTIVLSGL GSGKT+LFYQLRDGSSHQGTVT
Subjt:  MEGTEQWKVQVEQLKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGV------------ARFFKRRKSNTIVLSGLGGSGKTVLFYQLRDGSSHQGTVT

Query:  SMEPNEGTFVLHSEITKKEKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTK
        SMEPNEGTFVLHSEI KK+KLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTK
Subjt:  SMEPNEGTFVLHSEITKKEKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTK

Query:  EFINRQMEKEIVVFSMLYSDKLRVSRSVISAADISNDFTLGVPGKAFSFTQCHNKVTVAEASGLTGEVSEVEQFIRENVKF
        EFINRQMEKEI        DKLRVSRS IS ADISNDFTLG+PGKAFSFTQC+NKV VAEASGLTGEVSEVEQFIRENVKF
Subjt:  EFINRQMEKEIVVFSMLYSDKLRVSRSVISAADISNDFTLGVPGKAFSFTQCHNKVTVAEASGLTGEVSEVEQFIRENVKF

XP_022151281.1 signal recognition particle receptor subunit beta-like [Momordica charantia]2.0e-12285Show/hide
Query:  MEGTEQWKVQVEQLKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGV------------ARFFKRRKSNTIVLSGLGGSGKTVLFYQLRDGSSHQGTVT
        MEGTEQW       KV VEQLKVQMEQWL+QGLE VHQIPPIQLYVGV             R FKRRKSNTIVLSGL GSGKTV+FYQLRDGSSHQGTVT
Subjt:  MEGTEQWKVQVEQLKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGV------------ARFFKRRKSNTIVLSGLGGSGKTVLFYQLRDGSSHQGTVT

Query:  SMEPNEGTFVLHSEITKKEKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTK
        SMEPNEGTFVLHSEI+KK KLKPVHLVDVPGHSRLRAKLD+FLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTK
Subjt:  SMEPNEGTFVLHSEITKKEKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTK

Query:  EFINRQMEKEIVVFSMLYSDKLRVSRSVISAADISNDFTLGVPGKAFSFTQCHNKVTVAEASGLTGEVSEVEQFIRENVK
        EFINRQ EKEI        DKLRVSRS ISAADI+NDFTLGVPGKAFSF+QCHNKVTVAEASGLTGEV+EVEQFIRENVK
Subjt:  EFINRQMEKEIVVFSMLYSDKLRVSRSVISAADISNDFTLGVPGKAFSFTQCHNKVTVAEASGLTGEVSEVEQFIRENVK

XP_038892002.1 signal recognition particle receptor subunit beta-like [Benincasa hispida]1.8e-12687.54Show/hide
Query:  MEGTEQWKVQVEQLKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGV------------ARFFKRRKSNTIVLSGLGGSGKTVLFYQLRDGSSHQGTVT
        MEGTEQW       KVQVEQLKVQM+QWLEQGL+FVHQIPPIQLYVGV             R FKRRKSNTIVLSGL GSGKTVLFYQLRDGSSHQGTVT
Subjt:  MEGTEQWKVQVEQLKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGV------------ARFFKRRKSNTIVLSGLGGSGKTVLFYQLRDGSSHQGTVT

Query:  SMEPNEGTFVLHSEITKKEKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTK
        SMEPNEGTFVLHSEITKK+KLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTK
Subjt:  SMEPNEGTFVLHSEITKKEKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTK

Query:  EFINRQMEKEIVVFSMLYSDKLRVSRSVISAADISNDFTLGVPGKAFSFTQCHNKVTVAEASGLTGEVSEVEQFIRENVKF
        EFINRQMEKEI        DKLRVSRSVISAADISNDFTLGVPGKAFSFT CHNKVTVAEASGL GEVSEVEQFIRENVKF
Subjt:  EFINRQMEKEIVVFSMLYSDKLRVSRSVISAADISNDFTLGVPGKAFSFTQCHNKVTVAEASGLTGEVSEVEQFIRENVKF

TrEMBL top hitse value%identityAlignment
A0A0A0KSA6 Signal recognition particle receptor subunit beta1.5e-12686.83Show/hide
Query:  MEGTEQWKVQVEQLKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGV------------ARFFKRRKSNTIVLSGLGGSGKTVLFYQLRDGSSHQGTVT
        MEGTEQW       KVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGV             R FKRRKSNTIVLSGL GSGKT+LFYQLRDGSSHQGTVT
Subjt:  MEGTEQWKVQVEQLKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGV------------ARFFKRRKSNTIVLSGLGGSGKTVLFYQLRDGSSHQGTVT

Query:  SMEPNEGTFVLHSEITKKEKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTK
        SMEPNEGTFVLHSEI KK+KLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTK
Subjt:  SMEPNEGTFVLHSEITKKEKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTK

Query:  EFINRQMEKEIVVFSMLYSDKLRVSRSVISAADISNDFTLGVPGKAFSFTQCHNKVTVAEASGLTGEVSEVEQFIRENVKF
        EFINRQMEKEI        DKLRVSRS ISAADI+NDFTLG+PGKAFSFTQCHNKV VAEASGLTGEVSEVEQFIRENVKF
Subjt:  EFINRQMEKEIVVFSMLYSDKLRVSRSVISAADISNDFTLGVPGKAFSFTQCHNKVTVAEASGLTGEVSEVEQFIRENVKF

A0A1S3BEG3 Signal recognition particle receptor subunit beta2.7e-12586.12Show/hide
Query:  MEGTEQWKVQVEQLKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGV------------ARFFKRRKSNTIVLSGLGGSGKTVLFYQLRDGSSHQGTVT
        MEGTEQW       KVQVEQLKVQMEQWLE+GLEFVHQIPPIQLYVGV             R FKRRKSNTIVLSGL GSGKT+LFYQLRDGSSHQGTVT
Subjt:  MEGTEQWKVQVEQLKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGV------------ARFFKRRKSNTIVLSGLGGSGKTVLFYQLRDGSSHQGTVT

Query:  SMEPNEGTFVLHSEITKKEKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTK
        SMEPNEGTFVLHSEI KK+KLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTK
Subjt:  SMEPNEGTFVLHSEITKKEKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTK

Query:  EFINRQMEKEIVVFSMLYSDKLRVSRSVISAADISNDFTLGVPGKAFSFTQCHNKVTVAEASGLTGEVSEVEQFIRENVKF
        EFINRQMEKEI        DKLRVSRS IS ADISNDFTLG+PGKAFSFTQC+NKV VAEASGLTGEVSEVEQFIRENVKF
Subjt:  EFINRQMEKEIVVFSMLYSDKLRVSRSVISAADISNDFTLGVPGKAFSFTQCHNKVTVAEASGLTGEVSEVEQFIRENVKF

A0A5D3CWJ2 Signal recognition particle receptor subunit beta8.0e-12584.08Show/hide
Query:  MEGTEQWKVQVEQLKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGV--------------------ARFFKRRKSNTIVLSGLGGSGKTVLFYQLRDG
        MEGTEQW       KVQVEQLKVQMEQWLE+GLEFVHQIPPIQLYVGV                    AR FKRRKSNTIVLSGL GSGKT+LFYQLRDG
Subjt:  MEGTEQWKVQVEQLKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGV--------------------ARFFKRRKSNTIVLSGLGGSGKTVLFYQLRDG

Query:  SSHQGTVTSMEPNEGTFVLHSEITKKEKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKT
        SSHQGTVTSMEPNEGTFVLHSEI KK+KLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKT
Subjt:  SSHQGTVTSMEPNEGTFVLHSEITKKEKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKT

Query:  DKVTAHTKEFINRQMEKEIVVFSMLYSDKLRVSRSVISAADISNDFTLGVPGKAFSFTQCHNKVTVAEASGLTGEVSEVEQFIRENVKF
        DKVTAHTKEFINRQMEKEI        DKLRVSRS IS ADISNDFTLG+PGKAFSFTQC+NKV VAEASGLTGEVSEVEQFIRENVKF
Subjt:  DKVTAHTKEFINRQMEKEIVVFSMLYSDKLRVSRSVISAADISNDFTLGVPGKAFSFTQCHNKVTVAEASGLTGEVSEVEQFIRENVKF

A0A6J1DE59 Signal recognition particle receptor subunit beta9.8e-12385Show/hide
Query:  MEGTEQWKVQVEQLKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGV------------ARFFKRRKSNTIVLSGLGGSGKTVLFYQLRDGSSHQGTVT
        MEGTEQW       KV VEQLKVQMEQWL+QGLE VHQIPPIQLYVGV             R FKRRKSNTIVLSGL GSGKTV+FYQLRDGSSHQGTVT
Subjt:  MEGTEQWKVQVEQLKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGV------------ARFFKRRKSNTIVLSGLGGSGKTVLFYQLRDGSSHQGTVT

Query:  SMEPNEGTFVLHSEITKKEKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTK
        SMEPNEGTFVLHSEI+KK KLKPVHLVDVPGHSRLRAKLD+FLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTK
Subjt:  SMEPNEGTFVLHSEITKKEKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTK

Query:  EFINRQMEKEIVVFSMLYSDKLRVSRSVISAADISNDFTLGVPGKAFSFTQCHNKVTVAEASGLTGEVSEVEQFIRENVK
        EFINRQ EKEI        DKLRVSRS ISAADI+NDFTLGVPGKAFSF+QCHNKVTVAEASGLTGEV+EVEQFIRENVK
Subjt:  EFINRQMEKEIVVFSMLYSDKLRVSRSVISAADISNDFTLGVPGKAFSFTQCHNKVTVAEASGLTGEVSEVEQFIRENVK

E5GBI2 Signal recognition particle receptor subunit beta2.7e-12586.12Show/hide
Query:  MEGTEQWKVQVEQLKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGV------------ARFFKRRKSNTIVLSGLGGSGKTVLFYQLRDGSSHQGTVT
        MEGTEQW       KVQVEQLKVQMEQWLE+GLEFVHQIPPIQLYVGV             R FKRRKSNTIVLSGL GSGKT+LFYQLRDGSSHQGTVT
Subjt:  MEGTEQWKVQVEQLKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGV------------ARFFKRRKSNTIVLSGLGGSGKTVLFYQLRDGSSHQGTVT

Query:  SMEPNEGTFVLHSEITKKEKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTK
        SMEPNEGTFVLHSEI KK+KLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTK
Subjt:  SMEPNEGTFVLHSEITKKEKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTK

Query:  EFINRQMEKEIVVFSMLYSDKLRVSRSVISAADISNDFTLGVPGKAFSFTQCHNKVTVAEASGLTGEVSEVEQFIRENVKF
        EFINRQMEKEI        DKLRVSRS IS ADISNDFTLG+PGKAFSFTQC+NKV VAEASGLTGEVSEVEQFIRENVKF
Subjt:  EFINRQMEKEIVVFSMLYSDKLRVSRSVISAADISNDFTLGVPGKAFSFTQCHNKVTVAEASGLTGEVSEVEQFIRENVKF

SwissProt top hitse value%identityAlignment
P36057 Signal recognition particle receptor subunit beta1.4e-0929.3Show/hide
Query:  TIVLSGLGGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEITKKEKLKPVHLVDVPGHSRLRAKLDDFLPQAA----GVVFVVDALDFLPNCRAAS
        +I+++G   SGKT L   L    S + TV S EP        S +T         LVD PGH +LR KL D+L   A    G++F+VD+          +
Subjt:  TIVLSGLGGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEITKKEKLKPVHLVDVPGHSRLRAKLDDFLPQAA----GVVFVVDALDFLPNCRAAS

Query:  EYLYDILT-NASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEI-VVFSMLYSDKLRVSRSVISAADISNDFTLGVPGKAFSFTQCHNKVTVAEASGL
        E+L DIL+   S  +  I +LI CNK++  TA     I   +E EI  V          V R +       N   +      F F      V   E S  
Subjt:  EYLYDILT-NASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEI-VVFSMLYSDKLRVSRSVISAADISNDFTLGVPGKAFSFTQCHNKVTVAEASGL

Query:  TGEVSEVEQFIRENV
          ++S+  ++I E +
Subjt:  TGEVSEVEQFIRENV

P47758 Signal recognition particle receptor subunit beta2.8e-1834.12Show/hide
Query:  RFFKRRKSN--TIVLSGLGGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEITKKEKLKPVHLVDVPGHSRLRAK-LDDFLPQAAGVVFVVDALDF
        +F   RKS+   ++  GL  SGKT+LF +L  G  ++ T TS+  +   + +++      +   + L+D+PGH  LR + LD F   A  VVFVVD+  F
Subjt:  RFFKRRKSN--TIVLSGLGGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEITKKEKLKPVHLVDVPGHSRLRAK-LDDFLPQAAGVVFVVDALDF

Query:  LPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIVVFSMLYSDKLRVSRSVI-SAADISN--DFTLGVPGKAFSFTQCHNK
            +  +E+LY +L ++  +K    +LI CNK D   A + + I +Q+EKE+        + LRV+RS   S  D S+     LG  GK F F+Q   K
Subjt:  LPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIVVFSMLYSDKLRVSRSVI-SAADISN--DFTLGVPGKAFSFTQCHNK

Query:  VTVAEASGLTG
        V   E S   G
Subjt:  VTVAEASGLTG

Q4FZX7 Signal recognition particle receptor subunit beta4.8e-1833.65Show/hide
Query:  RFFKRRKSN--TIVLSGLGGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEITKKEKLKPVHLVDVPGHSRLRAK-LDDFLPQAAGVVFVVDALDF
        +F   RKS+   ++  GL  SGKT+LF +L  G  ++ T TS+  +   + +++      +   + L+D+PGH  LR + LD F   A  VVFVVD+  F
Subjt:  RFFKRRKSN--TIVLSGLGGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEITKKEKLKPVHLVDVPGHSRLRAK-LDDFLPQAAGVVFVVDALDF

Query:  LPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIVVFSMLYSDKLRVSRSVI-SAADISN--DFTLGVPGKAFSFTQCHNK
            +  +E+LY +L ++  +K     L+ CNK D   A + + I +Q+EKE+        + LRV+RS   S  D S+     LG  GK F F+Q   K
Subjt:  LPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIVVFSMLYSDKLRVSRSVI-SAADISN--DFTLGVPGKAFSFTQCHNK

Query:  VTVAEASGLTG
        V   E S   G
Subjt:  VTVAEASGLTG

Q54XX1 Signal recognition particle receptor subunit beta5.5e-2232.71Show/hide
Query:  KRRKSNTIVLSGLGGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEITKKEKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRA
        K ++   I + GL  +GKT L   L +      T TS+  N G +     IT+ +K  P+  +DVPG+ + +A L   L  +A +++V+D   F+ N   
Subjt:  KRRKSNTIVLSGLGGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEITKKEKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRA

Query:  ASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIVVFSMLYSDKLRVSRS----VISAADISNDFTLGVPGKAFSFTQCHNKVTVA-
         ++YLYDILTN SV +KKIPVL+  NK D  +    E +   +E+E+        D LR +R     V+   +   D  LG+ G  F F    N V  + 
Subjt:  ASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIVVFSMLYSDKLRVSRS----VISAADISNDFTLGVPGKAFSFTQCHNKVTVA-

Query:  -EASGLTGEVSEVE
          AS   GE+ E++
Subjt:  -EASGLTGEVSEVE

Q9Y5M8 Signal recognition particle receptor subunit beta6.9e-1733.01Show/hide
Query:  KRRKSNTIVLSGLGGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEITKKEKLKPVHLVDVPGHSRLRAK-LDDFLPQAAGVVFVVDALDFLPNCR
        +R     ++L GL  SGKT+LF +L  G  ++ T TS+  +   + +++      +   + L+D+PGH  LR + L+ F   A  +VFVVD+  F    +
Subjt:  KRRKSNTIVLSGLGGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEITKKEKLKPVHLVDVPGHSRLRAK-LDDFLPQAAGVVFVVDALDFLPNCR

Query:  AASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIVVFSMLYSDKLRVSRSVI-SAADISN--DFTLGVPGKAFSFTQCHNKVTVAE
          +E+LY +L ++  +K     LI CNK D   A + + I +Q+EKE+        + LRV+RS   S  D S+     LG  GK F F+Q   KV   E
Subjt:  AASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIVVFSMLYSDKLRVSRSVI-SAADISN--DFTLGVPGKAFSFTQCHNKVTVAE

Query:  ASGLTG
         S   G
Subjt:  ASGLTG

Arabidopsis top hitse value%identityAlignment
AT2G18770.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein8.8e-10070.45Show/hide
Query:  VEQLKVQMEQWLEQGLEFVHQIPPIQLYVGVA------------RFFKRRKSNTIVLSGLGGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSE-IT
        +E LK+  EQW +QGLEFV +IPP QLY  +             R F+R KSNT++LSGL GSGKTVLFYQLRDGSSHQG VTSMEPNEGTFVLH+E  T
Subjt:  VEQLKVQMEQWLEQGLEFVHQIPPIQLYVGVA------------RFFKRRKSNTIVLSGLGGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSE-IT

Query:  KKEKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIVVFSM
        KK K+KPVHL+DVPGHSRL +KL+++LP+AA VVFVVDAL+FLPN RAASEYLYDILTNASV+K K PVL+ CNKTDKVTAHTKEFI +QMEKEI     
Subjt:  KKEKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIVVFSM

Query:  LYSDKLRVSRSVISAADISNDFTLGVPGKAFSFTQCHNKVTVAEASGLTGEVSEVEQFIRENVK
           DKLRVSRS IS ADI+NDFTLG+ G+ FSF+ CHNKVTVAEASGLTGE  +V++FIRE+VK
Subjt:  LYSDKLRVSRSVISAADISNDFTLGVPGKAFSFTQCHNKVTVAEASGLTGEVSEVEQFIRENVK

AT3G49870.1 ADP-ribosylation factor-like A1C7.4e-0628.28Show/hide
Query:  FFKRRKSNTIVLSGLGGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEITKKEKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNC
        FFK+    +++  GL  +GKT L   +  G   +  + ++  N        ++TK      + L D+ G  R R+  + +    + +V+VVDA D   N 
Subjt:  FFKRRKSNTIVLSGLGGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEITKKEKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNC

Query:  RAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQM
          +   L+D+L+  S+    IP+L+L NK DK  A +KE +  +M
Subjt:  RAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQM

AT5G05670.1 signal recognition particle binding3.0e-10069.32Show/hide
Query:  VEQLKVQMEQWLEQGLEFVHQIPPIQLYVGVA-------------RFFKRRKSNTIVLSGLGGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIT
        +E LK+  EQW  QG+E++ +IPP QLY  +              R  +R KSNT++LSGL GSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSE T
Subjt:  VEQLKVQMEQWLEQGLEFVHQIPPIQLYVGVA-------------RFFKRRKSNTIVLSGLGGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIT

Query:  KKEKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIVVFSM
        KK K+KPVHLVDVPGHSRLR KL++FLPQAA +VFVVDAL+FLPNCRAASEYLY+ILTNA+VVKKKIPVL+ CNKTDK+TAHTKEFI +QMEKEI     
Subjt:  KKEKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIVVFSM

Query:  LYSDKLRVSRSVISAADISNDFTLGVPGKAFSFTQCHNKVTVAEASGLTGEVSEVEQFIRENVK
           +KLR SRS +S ADI+NDFT+G+ G+ FSFT C NKVTVAEASGLTGE  ++E FIRE +K
Subjt:  LYSDKLRVSRSVISAADISNDFTLGVPGKAFSFTQCHNKVTVAEASGLTGEVSEVEQFIRENVK

AT5G05670.2 signal recognition particle binding3.0e-10069.32Show/hide
Query:  VEQLKVQMEQWLEQGLEFVHQIPPIQLYVGVA-------------RFFKRRKSNTIVLSGLGGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIT
        +E LK+  EQW  QG+E++ +IPP QLY  +              R  +R KSNT++LSGL GSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSE T
Subjt:  VEQLKVQMEQWLEQGLEFVHQIPPIQLYVGVA-------------RFFKRRKSNTIVLSGLGGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIT

Query:  KKEKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIVVFSM
        KK K+KPVHLVDVPGHSRLR KL++FLPQAA +VFVVDAL+FLPNCRAASEYLY+ILTNA+VVKKKIPVL+ CNKTDK+TAHTKEFI +QMEKEI     
Subjt:  KKEKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIVVFSM

Query:  LYSDKLRVSRSVISAADISNDFTLGVPGKAFSFTQCHNKVTVAEASGLTGEVSEVEQFIRENVK
           +KLR SRS +S ADI+NDFT+G+ G+ FSFT C NKVTVAEASGLTGE  ++E FIRE +K
Subjt:  LYSDKLRVSRSVISAADISNDFTLGVPGKAFSFTQCHNKVTVAEASGLTGEVSEVEQFIRENVK

AT5G67560.1 ADP-ribosylation factor-like A1D5.7e-0628.28Show/hide
Query:  FFKRRKSNTIVLSGLGGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEITKKEKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNC
        FFK+    +++  GL  +GKT L   +  G   +  + ++  N        ++TK      + L D+ G  R R+  + +    + +V+VVDA D   N 
Subjt:  FFKRRKSNTIVLSGLGGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEITKKEKLKPVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNC

Query:  RAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQM
          +   L+D+L+  S+    IP+L+L NK DK  A +KE +  +M
Subjt:  RAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGTACGGAACAGTGGAAGGTTCAGGTTGAACAATTGAAGGTTCAGGTGGAACAATTGAAGGTTCAGATGGAGCAATGGCTGGAACAAGGCTTGGAGTTTGTTCA
CCAAATACCCCCAATTCAACTCTACGTTGGGGTTGCTCGCTTTTTTAAGCGCAGGAAATCGAATACCATTGTACTCAGTGGGCTCGGTGGAAGTGGGAAAACTGTTCTTT
TTTATCAACTTCGTGATGGTTCTTCTCATCAGGGTACTGTTACATCAATGGAACCTAATGAGGGCACTTTTGTGCTTCATTCTGAAATAACAAAGAAGGAAAAACTGAAG
CCTGTTCATCTTGTCGATGTCCCTGGGCATTCTCGCCTTCGAGCTAAACTAGATGACTTTTTGCCTCAAGCAGCTGGTGTAGTCTTTGTGGTGGATGCTTTGGATTTTTT
GCCCAACTGTCGTGCAGCTTCAGAGTACCTTTATGACATCCTGACTAATGCGAGTGTTGTGAAGAAGAAAATCCCTGTCCTGATACTATGCAACAAAACAGACAAGGTGA
CAGCCCACACAAAGGAGTTTATCAATAGGCAAATGGAAAAAGAGATCGTCGTGTTTTCTATGTTGTACAGTGACAAGTTACGAGTATCTAGAAGTGTGATCTCGGCTGCT
GATATCTCAAATGACTTCACACTAGGAGTACCTGGAAAAGCGTTTTCGTTCACACAGTGCCATAACAAAGTTACAGTTGCTGAAGCCTCTGGATTGACTGGTGAAGTATC
TGAGGTGGAGCAGTTTATAAGGGAAAACGTGAAGTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGTACGGAACAGTGGAAGGTTCAGGTTGAACAATTGAAGGTTCAGGTGGAACAATTGAAGGTTCAGATGGAGCAATGGCTGGAACAAGGCTTGGAGTTTGTTCA
CCAAATACCCCCAATTCAACTCTACGTTGGGGTTGCTCGCTTTTTTAAGCGCAGGAAATCGAATACCATTGTACTCAGTGGGCTCGGTGGAAGTGGGAAAACTGTTCTTT
TTTATCAACTTCGTGATGGTTCTTCTCATCAGGGTACTGTTACATCAATGGAACCTAATGAGGGCACTTTTGTGCTTCATTCTGAAATAACAAAGAAGGAAAAACTGAAG
CCTGTTCATCTTGTCGATGTCCCTGGGCATTCTCGCCTTCGAGCTAAACTAGATGACTTTTTGCCTCAAGCAGCTGGTGTAGTCTTTGTGGTGGATGCTTTGGATTTTTT
GCCCAACTGTCGTGCAGCTTCAGAGTACCTTTATGACATCCTGACTAATGCGAGTGTTGTGAAGAAGAAAATCCCTGTCCTGATACTATGCAACAAAACAGACAAGGTGA
CAGCCCACACAAAGGAGTTTATCAATAGGCAAATGGAAAAAGAGATCGTCGTGTTTTCTATGTTGTACAGTGACAAGTTACGAGTATCTAGAAGTGTGATCTCGGCTGCT
GATATCTCAAATGACTTCACACTAGGAGTACCTGGAAAAGCGTTTTCGTTCACACAGTGCCATAACAAAGTTACAGTTGCTGAAGCCTCTGGATTGACTGGTGAAGTATC
TGAGGTGGAGCAGTTTATAAGGGAAAACGTGAAGTTCTAG
Protein sequenceShow/hide protein sequence
MEGTEQWKVQVEQLKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGVARFFKRRKSNTIVLSGLGGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFVLHSEITKKEKLK
PVHLVDVPGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILCNKTDKVTAHTKEFINRQMEKEIVVFSMLYSDKLRVSRSVISAA
DISNDFTLGVPGKAFSFTQCHNKVTVAEASGLTGEVSEVEQFIRENVKF