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Lsi04G005820 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G005820
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGlutamate--glyoxylate aminotransferase 2
Genome locationchr04:5317019..5319813
RNA-Seq ExpressionLsi04G005820
SyntenyLsi04G005820
Gene Ontology termsGO:0009058 - biosynthetic process (biological process)
GO:0009853 - photorespiration (biological process)
GO:0004021 - L-alanine:2-oxoglutarate aminotransferase activity (molecular function)
GO:0008453 - alanine-glyoxylate transaminase activity (molecular function)
GO:0030170 - pyridoxal phosphate binding (molecular function)
GO:0047958 - glycine:2-oxoglutarate aminotransferase activity (molecular function)
InterPro domainsIPR015421 - Pyridoxal phosphate-dependent transferase, major domain
IPR015422 - Pyridoxal phosphate-dependent transferase, small domain
IPR015424 - Pyridoxal phosphate-dependent transferase
IPR045088 - Aminotransferase ALAT1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034280.1 Glutamate--glyoxylate aminotransferase 2 [Cucumis melo var. makuwa]9.3e-5083.46Show/hide
Query:  MSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPGGL
        MS+KALDY+SINENVKKAQYAVRGELYLRASELQKEGK+IIFTNVGNPHALGQKPLTFPR                  LIFPADAIARAKHYLSLIPGGL
Subjt:  MSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPGGL

Query:  GAYSDSRGIPAIRKEVADFIGRRDGYP
        GAYSDSRGIPAIRKEVADFIGRRDGYP
Subjt:  GAYSDSRGIPAIRKEVADFIGRRDGYP

KAE8648708.1 hypothetical protein Csa_008240 [Cucumis sativus]4.2e-5084.25Show/hide
Query:  MSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPGGL
        MS+KALDY+SINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR                  LIFPADAIARAKHYLSLIPGGL
Subjt:  MSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPGGL

Query:  GAYSDSRGIPAIRKEVADFIGRRDGYP
        GAYSDSRGIPAIRKEVADFIGRRDGYP
Subjt:  GAYSDSRGIPAIRKEVADFIGRRDGYP

XP_011655611.1 glutamate--glyoxylate aminotransferase 2 [Cucumis sativus]4.2e-5084.25Show/hide
Query:  MSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPGGL
        MS+KALDY+SINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR                  LIFPADAIARAKHYLSLIPGGL
Subjt:  MSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPGGL

Query:  GAYSDSRGIPAIRKEVADFIGRRDGYP
        GAYSDSRGIPAIRKEVADFIGRRDGYP
Subjt:  GAYSDSRGIPAIRKEVADFIGRRDGYP

XP_038892672.1 glutamate--glyoxylate aminotransferase 2-like [Benincasa hispida]1.1e-5085.04Show/hide
Query:  MSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPGGL
        MSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR                  LIFPADAIARAKHYLSLIPGGL
Subjt:  MSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPGGL

Query:  GAYSDSRGIPAIRKEVADFIGRRDGYP
        GAYSDSRG+PAIRKEVADFIGRRDGYP
Subjt:  GAYSDSRGIPAIRKEVADFIGRRDGYP

XP_038893048.1 glutamate--glyoxylate aminotransferase 2 [Benincasa hispida]1.9e-5085.04Show/hide
Query:  MSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPGGL
        MS+KALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR                  LIFPADAIARAKHYLSLIPGGL
Subjt:  MSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPGGL

Query:  GAYSDSRGIPAIRKEVADFIGRRDGYP
        GAYSDSRGIPAIRKEVADFIGRRDGYP
Subjt:  GAYSDSRGIPAIRKEVADFIGRRDGYP

TrEMBL top hitse value%identityAlignment
A0A0A0KQ42 Aminotran_1_2 domain-containing protein2.0e-5084.25Show/hide
Query:  MSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPGGL
        MS+KALDY+SINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR                  LIFPADAIARAKHYLSLIPGGL
Subjt:  MSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPGGL

Query:  GAYSDSRGIPAIRKEVADFIGRRDGYP
        GAYSDSRGIPAIRKEVADFIGRRDGYP
Subjt:  GAYSDSRGIPAIRKEVADFIGRRDGYP

A0A5D3CZ18 Putative alanine aminotransferase1.7e-4984.25Show/hide
Query:  MSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPGGL
        MSQKALDYESINE VKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR                  LIFPADAIARAK YLSLIPGGL
Subjt:  MSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPGGL

Query:  GAYSDSRGIPAIRKEVADFIGRRDGYP
        GAYSDSRGIPAIRKEVADFIGRRDGYP
Subjt:  GAYSDSRGIPAIRKEVADFIGRRDGYP

A0A5D3CZM9 Glutamate--glyoxylate aminotransferase 24.5e-5083.46Show/hide
Query:  MSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPGGL
        MS+KALDY+SINENVKKAQYAVRGELYLRASELQKEGK+IIFTNVGNPHALGQKPLTFPR                  LIFPADAIARAKHYLSLIPGGL
Subjt:  MSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPGGL

Query:  GAYSDSRGIPAIRKEVADFIGRRDGYP
        GAYSDSRGIPAIRKEVADFIGRRDGYP
Subjt:  GAYSDSRGIPAIRKEVADFIGRRDGYP

A0A6J1DD87 glutamate--glyoxylate aminotransferase 2 isoform X11.0e-4983.46Show/hide
Query:  MSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPGGL
        MS+KALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR                  LIFPADAIARAK+YLSLIPGGL
Subjt:  MSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPGGL

Query:  GAYSDSRGIPAIRKEVADFIGRRDGYP
        GAYSDSRG+PAIRKEVADFIGRRDGYP
Subjt:  GAYSDSRGIPAIRKEVADFIGRRDGYP

A0A6J1DE72 glutamate--glyoxylate aminotransferase 2 isoform X21.0e-4983.46Show/hide
Query:  MSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPGGL
        MS+KALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR                  LIFPADAIARAK+YLSLIPGGL
Subjt:  MSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPGGL

Query:  GAYSDSRGIPAIRKEVADFIGRRDGYP
        GAYSDSRG+PAIRKEVADFIGRRDGYP
Subjt:  GAYSDSRGIPAIRKEVADFIGRRDGYP

SwissProt top hitse value%identityAlignment
P52892 Probable alanine aminotransferase3.4e-1843.08Show/hide
Query:  ESINENVKKAQYAVRGELYLRASELQKEGKK---------IIFTNVGNPHALGQKPLTFPRLI----------------------FPADAIARAKHYLSL
        + +N  V KA+YAVRG +  RA EL++E KK         II  N+GNP  L QKPLTF R +                      F  DA+ RA+  L+ 
Subjt:  ESINENVKKAQYAVRGELYLRASELQKEGKK---------IIFTNVGNPHALGQKPLTFPRLI----------------------FPADAIARAKHYLSL

Query:  IPGGLGAYSDSRGIPAIRKEVADFIGRRDG
        I G +GAYS S+G+P IR+ VADFI RRDG
Subjt:  IPGGLGAYSDSRGIPAIRKEVADFIGRRDG

P52894 Alanine aminotransferase 23.7e-1738.76Show/hide
Query:  ESINENVKKAQYAVRGELYLRASELQKEGK---------KIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPG-
        +++N  V K +YAVRGE+ + A  LQ++ K         +I++ N+GNP +LGQ+P+TF R                   +F AD+I+RAK  L++IPG 
Subjt:  ESINENVKKAQYAVRGELYLRASELQKEGK---------KIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPG-

Query:  GLGAYSDSRGIPAIRKEVADFIGRRDGYP
          GAYS S+GI  +R  +A  I  RDG+P
Subjt:  GLGAYSDSRGIPAIRKEVADFIGRRDGYP

Q54MJ7 Probable alanine aminotransferase, mitochondrial1.2e-1843.07Show/hide
Query:  QKALDYESINENVKKAQYAVRGELYLRAS----ELQK---EGKK------IIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARA
        +K++  ++I +NV+ AQYAVRGEL +RA     +LQK   EG K      I++ N+GNP  L QKPLT+ R                   I+PAD I+RA
Subjt:  QKALDYESINENVKKAQYAVRGELYLRAS----ELQK---EGKK------IIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARA

Query:  KHYLSLIPGGLGAYSDSRGIPAIRKEVADFIGRRDGY
        K  L  I    GAYS+S+GI  + + VADFI RRDG+
Subjt:  KHYLSLIPGGLGAYSDSRGIPAIRKEVADFIGRRDGY

Q9LR30 Glutamate--glyoxylate aminotransferase 14.5e-4774.02Show/hide
Query:  MSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPGGL
        M+ KALDY+++NENVKK QYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR                  ++FPADAIARAKHYLSL  GGL
Subjt:  MSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPGGL

Query:  GAYSDSRGIPAIRKEVADFIGRRDGYP
        GAYSDSRG+P +RKEVA+FI RRDGYP
Subjt:  GAYSDSRGIPAIRKEVADFIGRRDGYP

Q9S7E9 Glutamate--glyoxylate aminotransferase 29.1e-4876.38Show/hide
Query:  MSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPGGL
        MS KALDYES+NENVK  QYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR                  +IFPADAIARAKHYLSL  GGL
Subjt:  MSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPGGL

Query:  GAYSDSRGIPAIRKEVADFIGRRDGYP
        GAYSDSRG+P +RKEVA+FI RRDGYP
Subjt:  GAYSDSRGIPAIRKEVADFIGRRDGYP

Arabidopsis top hitse value%identityAlignment
AT1G23310.1 glutamate:glyoxylate aminotransferase3.2e-4874.02Show/hide
Query:  MSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPGGL
        M+ KALDY+++NENVKK QYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR                  ++FPADAIARAKHYLSL  GGL
Subjt:  MSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPGGL

Query:  GAYSDSRGIPAIRKEVADFIGRRDGYP
        GAYSDSRG+P +RKEVA+FI RRDGYP
Subjt:  GAYSDSRGIPAIRKEVADFIGRRDGYP

AT1G70580.1 alanine-2-oxoglutarate aminotransferase 26.4e-4976.38Show/hide
Query:  MSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPGGL
        MS KALDYES+NENVK  QYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR                  +IFPADAIARAKHYLSL  GGL
Subjt:  MSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPGGL

Query:  GAYSDSRGIPAIRKEVADFIGRRDGYP
        GAYSDSRG+P +RKEVA+FI RRDGYP
Subjt:  GAYSDSRGIPAIRKEVADFIGRRDGYP

AT1G70580.2 alanine-2-oxoglutarate aminotransferase 26.4e-4976.38Show/hide
Query:  MSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPGGL
        MS KALDYES+NENVK  QYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR                  +IFPADAIARAKHYLSL  GGL
Subjt:  MSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPGGL

Query:  GAYSDSRGIPAIRKEVADFIGRRDGYP
        GAYSDSRG+P +RKEVA+FI RRDGYP
Subjt:  GAYSDSRGIPAIRKEVADFIGRRDGYP

AT1G70580.3 alanine-2-oxoglutarate aminotransferase 26.4e-4976.38Show/hide
Query:  MSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPGGL
        MS KALDYES+NENVK  QYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR                  +IFPADAIARAKHYLSL  GGL
Subjt:  MSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPGGL

Query:  GAYSDSRGIPAIRKEVADFIGRRDGYP
        GAYSDSRG+P +RKEVA+FI RRDGYP
Subjt:  GAYSDSRGIPAIRKEVADFIGRRDGYP

AT1G70580.4 alanine-2-oxoglutarate aminotransferase 26.4e-4976.38Show/hide
Query:  MSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPGGL
        MS KALDYES+NENVK  QYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR                  +IFPADAIARAKHYLSL  GGL
Subjt:  MSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPR------------------LIFPADAIARAKHYLSLIPGGL

Query:  GAYSDSRGIPAIRKEVADFIGRRDGYP
        GAYSDSRG+P +RKEVA+FI RRDGYP
Subjt:  GAYSDSRGIPAIRKEVADFIGRRDGYP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAATTGCTCCGAGGCGATTGTTCTCTTAGTTCATCTTGCAATATTGGAAGAAGGGATGCTAGTTGCTTGGAATCTACAAGAGGTTATATTAATCATCATGTCACA
AAAGGCACTAGACTACGAGTCAATTAATGAAAATGTGAAGAAGGCTCAGTATGCTGTTAGAGGAGAACTGTATCTGCGAGCCTCTGAGCTTCAGAAAGAAGGGAAAAAGA
TTATTTTCACAAATGTTGGGAATCCTCATGCTCTTGGACAGAAGCCATTGACTTTTCCACGATTAATATTTCCTGCTGATGCTATTGCAAGAGCTAAACATTACCTCTCA
TTGATTCCAGGAGGCCTAGGTGCTTACAGCGATTCCCGAGGAATTCCTGCAATTCGGAAGGAAGTAGCAGACTTTATAGGAAGGCGAGATGGCTATCCAAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCAATTGCTCCGAGGCGATTGTTCTCTTAGTTCATCTTGCAATATTGGAAGAAGGGATGCTAGTTGCTTGGAATCTACAAGAGGTTATATTAATCATCATGTCACA
AAAGGCACTAGACTACGAGTCAATTAATGAAAATGTGAAGAAGGCTCAGTATGCTGTTAGAGGAGAACTGTATCTGCGAGCCTCTGAGCTTCAGAAAGAAGGGAAAAAGA
TTATTTTCACAAATGTTGGGAATCCTCATGCTCTTGGACAGAAGCCATTGACTTTTCCACGATTAATATTTCCTGCTGATGCTATTGCAAGAGCTAAACATTACCTCTCA
TTGATTCCAGGAGGCCTAGGTGCTTACAGCGATTCCCGAGGAATTCCTGCAATTCGGAAGGAAGTAGCAGACTTTATAGGAAGGCGAGATGGCTATCCAAGGTAA
Protein sequenceShow/hide protein sequence
MSNCSEAIVLLVHLAILEEGMLVAWNLQEVILIIMSQKALDYESINENVKKAQYAVRGELYLRASELQKEGKKIIFTNVGNPHALGQKPLTFPRLIFPADAIARAKHYLS
LIPGGLGAYSDSRGIPAIRKEVADFIGRRDGYPR