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Lsi04G005920 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G005920
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr04:5445440..5447051
RNA-Seq ExpressionLsi04G005920
SyntenyLsi04G005920
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038893337.1 uncharacterized protein LOC120082160 isoform X1 [Benincasa hispida]1.2e-0659.02Show/hide
Query:  LKMTRNSGCASAIGCKISVLANLSFKYFTSPIRGTCEENLLLSEPEISEARLLCFVYQEFL
        LK TRN  CASAI C                   TCEENLLLSEPEISE RLLCF+YQEFL
Subjt:  LKMTRNSGCASAIGCKISVLANLSFKYFTSPIRGTCEENLLLSEPEISEARLLCFVYQEFL
XP_038893341.1 uncharacterized protein LOC120082160 isoform X2 [Benincasa hispida]1.2e-0659.02Show/hide
Query:  LKMTRNSGCASAIGCKISVLANLSFKYFTSPIRGTCEENLLLSEPEISEARLLCFVYQEFL
        LK TRN  CASAI C                   TCEENLLLSEPEISE RLLCF+YQEFL
Subjt:  LKMTRNSGCASAIGCKISVLANLSFKYFTSPIRGTCEENLLLSEPEISEARLLCFVYQEFL
XP_038893342.1 uncharacterized protein LOC120082160 isoform X3 [Benincasa hispida]1.2e-0659.02Show/hide
Query:  LKMTRNSGCASAIGCKISVLANLSFKYFTSPIRGTCEENLLLSEPEISEARLLCFVYQEFL
        LK TRN  CASAI C                   TCEENLLLSEPEISE RLLCF+YQEFL
Subjt:  LKMTRNSGCASAIGCKISVLANLSFKYFTSPIRGTCEENLLLSEPEISEARLLCFVYQEFL
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGATCTTCCATTTACCATTAGGTCCGTTCATCACACGTTTGTCCTCTCTGCCAGTAAGAGTCTAGCAAATTCCACGCACGGAGTATCCATAGTTTTAGGTCTGAT
TGCTGCTTGTGGACAATACTTGAAGATGACAAGGAACTCCGGATGCGCTTCAGCAATTGGATGTAAGATCTCCGTCCTAGCTAATCTATCATTCAAATATTTCACAAGTC
CTATTCGCGGTACATGTGAAGAAAATCTTCTCTTGTCAGAACCAGAGATCTCTGAGGCCCGTTTGCTCTGTTTTGTATACCAAGAGTTTCTTTTTCACAATCACAGAGTG
AATCCAATCCCTGAACTTGAAAATTTTGAGGAAAAGTCCAAGAGTGGACAGCAAGGACTATGGCTGAGAATGCATTGGGGACCATATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATGATCTTCCATTTACCATTAGGTCCGTTCATCACACGTTTGTCCTCTCTGCCAGTAAGAGTCTAGCAAATTCCACGCACGGAGTATCCATAGTTTTAGGTCTGAT
TGCTGCTTGTGGACAATACTTGAAGATGACAAGGAACTCCGGATGCGCTTCAGCAATTGGATGTAAGATCTCCGTCCTAGCTAATCTATCATTCAAATATTTCACAAGTC
CTATTCGCGGTACATGTGAAGAAAATCTTCTCTTGTCAGAACCAGAGATCTCTGAGGCCCGTTTGCTCTGTTTTGTATACCAAGAGTTTCTTTTTCACAATCACAGAGTG
AATCCAATCCCTGAACTTGAAAATTTTGAGGAAAAGTCCAAGAGTGGACAGCAAGGACTATGGCTGAGAATGCATTGGGGACCATATTGA
Protein sequenceShow/hide protein sequence
MYDLPFTIRSVHHTFVLSASKSLANSTHGVSIVLGLIAACGQYLKMTRNSGCASAIGCKISVLANLSFKYFTSPIRGTCEENLLLSEPEISEARLLCFVYQEFLFHNHRV
NPIPELENFEEKSKSGQQGLWLRMHWGPY