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Lsi04G005980 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G005980
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr04:5534664..5534939
RNA-Seq ExpressionLsi04G005980
SyntenyLsi04G005980
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034268.1 hypothetical protein E6C27_scaffold65G002670 [Cucumis melo var. makuwa]1.4e-3584.78Show/hide
Query:  MSFRNSHLKFNVDRGTHSSVDYGGYISDSVLVTRKHHKNQRPHVTFS-NNNNDIPDVHETSRHRRVHFYTDDINDEAEEFIRLKHNQMSIDL
        MS RNS LKFNVDRGT SS DYGGYISDSVL TRKHHKNQ+PHVTFS NNNN++PDVH+TS+HR  HFYT+DINDEAEEFIRLKHNQMSIDL
Subjt:  MSFRNSHLKFNVDRGTHSSVDYGGYISDSVLVTRKHHKNQRPHVTFS-NNNNDIPDVHETSRHRRVHFYTDDINDEAEEFIRLKHNQMSIDL
KAG6573703.1 hypothetical protein SDJN03_27590, partial [Cucurbita argyrosperma subsp. sororia]1.6e-1862.92Show/hide
Query:  MSFRNSHLK-FNVDRGTHSSVDYGGYISDSVLVTRKHHKNQRPHVTFSNNNNDIPDVHETSRHRRVHFYTDDINDEAEEFIRLKHNQMS
        MSFR+S LK F+V  G HSS +YGGY+SDS+LVTR+H K+ R HVTFS + N+I DV+E SR  R    T++I+D AEEFIRLKHNQMS
Subjt:  MSFRNSHLK-FNVDRGTHSSVDYGGYISDSVLVTRKHHKNQRPHVTFSNNNNDIPDVHETSRHRRVHFYTDDINDEAEEFIRLKHNQMS
TrEMBL top hitse value%identityAlignment
A0A0A0KQ47 Uncharacterized protein1.4e-3381.11Show/hide
Query:  MSFRNSHLKFNVDRGTHSSVDYGGYISDSVLVTRKHHKNQRPHVTFSNNNNDIPDVHETSRHRRVHFYTDDINDEAEEFIRLKHNQMSID
        MSFRNS LKFNVD GTHSS DYGGYISDSVL TRK+HKNQ+PHVTFS  NN + DVH+TS+H   HFYTDDINDEAEEFIRLK NQMSID
Subjt:  MSFRNSHLKFNVDRGTHSSVDYGGYISDSVLVTRKHHKNQRPHVTFSNNNNDIPDVHETSRHRRVHFYTDDINDEAEEFIRLKHNQMSID
A0A5A7SUE3 Uncharacterized protein6.8e-3684.78Show/hide
Query:  MSFRNSHLKFNVDRGTHSSVDYGGYISDSVLVTRKHHKNQRPHVTFS-NNNNDIPDVHETSRHRRVHFYTDDINDEAEEFIRLKHNQMSIDL
        MS RNS LKFNVDRGT SS DYGGYISDSVL TRKHHKNQ+PHVTFS NNNN++PDVH+TS+HR  HFYT+DINDEAEEFIRLKHNQMSIDL
Subjt:  MSFRNSHLKFNVDRGTHSSVDYGGYISDSVLVTRKHHKNQRPHVTFS-NNNNDIPDVHETSRHRRVHFYTDDINDEAEEFIRLKHNQMSIDL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTTAGAAATTCTCATCTCAAGTTCAACGTCGATCGTGGTACTCATTCCTCAGTCGACTATGGTGGTTACATTTCTGACTCTGTGCTCGTGACTCGAAAGCACCA
CAAAAACCAAAGACCTCACGTAACATTCAGCAACAACAACAACGACATACCTGATGTTCACGAGACTTCTAGACACCGCCGTGTTCATTTCTATACCGATGACATCAACG
ATGAGGCTGAGGAGTTCATTAGGTTGAAGCACAACCAGATGTCTATTGACCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTTTAGAAATTCTCATCTCAAGTTCAACGTCGATCGTGGTACTCATTCCTCAGTCGACTATGGTGGTTACATTTCTGACTCTGTGCTCGTGACTCGAAAGCACCA
CAAAAACCAAAGACCTCACGTAACATTCAGCAACAACAACAACGACATACCTGATGTTCACGAGACTTCTAGACACCGCCGTGTTCATTTCTATACCGATGACATCAACG
ATGAGGCTGAGGAGTTCATTAGGTTGAAGCACAACCAGATGTCTATTGACCTCTAA
Protein sequenceShow/hide protein sequence
MSFRNSHLKFNVDRGTHSSVDYGGYISDSVLVTRKHHKNQRPHVTFSNNNNDIPDVHETSRHRRVHFYTDDINDEAEEFIRLKHNQMSIDL