CuGenDBv2

Gene ID	Lsi04G006050
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Coilin
Genome location	chr04:5580052..5589386
RNA-Seq Expression	Lsi04G006050
Synteny	Lsi04G006050
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005634 - nucleus (cellular component) GO:0005840 - ribosome (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001911 - Ribosomal protein S21 IPR024822 - Coilin IPR031722 - Coilin, N-terminal domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0034262.1 coilin isoform X1 [Cucumis melo var. makuwa]

2.4e-290

84.29

Show/hide

Query:  MMEAVRLRVLFKDKDLLTESLTGLSRSWIVLKPHLRTISDLSSYILSVFRLQDACPNGLILSMDGFVLPPFESVCILKDKDIVRVKKKKSKAISLNDGNR
        MMEAVRLRV FKDKDLLT+SLTGLSRSWI LKPHLRTISDLSSYILSVFRL DACPNG+ILSMDGFVLPPFESVCILKD+DIVRVKKKKSKA  L +G+R
Subjt:  MMEAVRLRVLFKDKDLLTESLTGLSRSWIVLKPHLRTISDLSSYILSVFRLQDACPNGLILSMDGFVLPPFESVCILKDKDIVRVKKKKSKAISLNDGNR

Query:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESESEEDEPNATLPVKAAPIEKRVSKKRKASKIIRNSKRKKNKSSLTEEFPTIVADVQHANEKHEERN
        LIETEEFRERKPVD GVK LADKEFENESNGYES+SEEDE NATLPVKA P+ K+VSKKRKASKII NSKRKKNKSS TEEFPTI+ADV+H +EKHEERN
Subjt:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESESEEDEPNATLPVKAAPIEKRVSKKRKASKIIRNSKRKKNKSSLTEEFPTIVADVQHANEKHEERN

Query:  HLKSDHPQKVLVSKNDSSSSSSKCESDTSSSIENDGRSNNIVKSTAIAER-ADQLGAGGKHVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQNEEQQQ
        HLKS+ PQKVLVSK DSSSSSS+C+SDTSSSIE  G+SNNI+KST  AER  DQLGAG  HVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQNEEQQQ
Subjt:  HLKSDHPQKVLVSKNDSSSSSSKCESDTSSSIENDGRSNNIVKSTAIAER-ADQLGAGGKHVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQNEEQQQ

Query:  KVFETSLDQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVSDQAEQQKQNHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSNNCTGEPLQLPSEE
        ++FET+LDQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVV+DQA Q+K+NHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSN CT EPLQL S E
Subjt:  KVFETSLDQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVSDQAEQQKQNHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSNNCTGEPLQLPSEE

Query:  TEQPKIPVPVVGPINFDEIRPCTGLPQEGDLIAYRLIELSSTWTPEISSFRVKFFYNVILCLTLCYHSPCVILVIFLFQAGKVSWYDAESNRIMLTPVPE
        TEQPK PVPVVG INFDE+RP TGLPQEGDLIAYRLIELSSTWTPEISSFR                            AGKVSWYD ESNRIML PVPE
Subjt:  TEQPKIPVPVVGPINFDEIRPCTGLPQEGDLIAYRLIELSSTWTPEISSFRVKFFYNVILCLTLCYHSPCVILVIFLFQAGKVSWYDAESNRIMLTPVPE

Query:  YPLPVKKEIDEDSELQLDTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEITSTKQTAESSKLVHINGDSNDARPGNGKVSAWDEISEALNAKK
        YP+PVKKEIDEDSELQ DTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEITS KQ AESSK VH NGD+ND R GNGKVSAWDEISEAL+AKK
Subjt:  YPLPVKKEIDEDSELQLDTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEITSTKQTAESSKLVHINGDSNDARPGNGKVSAWDEISEALNAKK

Query:  AELSKNDGWNQEESSGRRLWSYRALRGSALGPTMALLRAQNEL
         ELSKN+GWNQEESSGR+ WSYRALRGSALGPTMALLR+Q EL
Subjt:  AELSKNDGWNQEESSGRRLWSYRALRGSALGPTMALLRAQNEL

XP_008446142.1 PREDICTED: coilin isoform X1 [Cucumis melo]

9.9e-292

84.42

Show/hide

Query:  MMEAVRLRVLFKDKDLLTESLTGLSRSWIVLKPHLRTISDLSSYILSVFRLQDACPNGLILSMDGFVLPPFESVCILKDKDIVRVKKKKSKAISLNDGNR
        MMEAVRLRV FKDKDLLT+SLTGLSRSWI LKPHLRTISDLSSYILSVFRL DACPNG+ILSMDGFVLPPFESVCILKD+DIVRVKKKKSKA  L +G+R
Subjt:  MMEAVRLRVLFKDKDLLTESLTGLSRSWIVLKPHLRTISDLSSYILSVFRLQDACPNGLILSMDGFVLPPFESVCILKDKDIVRVKKKKSKAISLNDGNR

Query:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESESEEDEPNATLPVKAAPIEKRVSKKRKASKIIRNSKRKKNKSSLTEEFPTIVADVQHANEKHEERN
        LIETEEFRERKPVD GVK LADKEFENESNGYES+SEEDE NATLPVKA P+ K+VSKKRKASKII NSKRKKNKSS TEEFPTI+ADV+H +EKHEERN
Subjt:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESESEEDEPNATLPVKAAPIEKRVSKKRKASKIIRNSKRKKNKSSLTEEFPTIVADVQHANEKHEERN

Query:  HLKSDHPQKVLVSKNDSSSSSSKCESDTSSSIENDGRSNNIVKSTAIAERADQLGAGGKHVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQNEEQQQK
        HLKS+ PQKVLVSK DSSSSSS+C+SDTSSSIE  G+SNNI+KST  AER DQLGAG  HVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQNEEQQQ+
Subjt:  HLKSDHPQKVLVSKNDSSSSSSKCESDTSSSIENDGRSNNIVKSTAIAERADQLGAGGKHVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQNEEQQQK

Query:  VFETSLDQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVSDQAEQQKQNHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSNNCTGEPLQLPSEET
        +FET+LDQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVV+DQA Q+K+NHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSN CT EPLQL S ET
Subjt:  VFETSLDQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVSDQAEQQKQNHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSNNCTGEPLQLPSEET

Query:  EQPKIPVPVVGPINFDEIRPCTGLPQEGDLIAYRLIELSSTWTPEISSFRVKFFYNVILCLTLCYHSPCVILVIFLFQAGKVSWYDAESNRIMLTPVPEY
        EQPK PVPVVG INFDE+RP TGLPQEGDLIAYRLIELSSTWTPEISSFR                            AGKVSWYD ESNRIML PVPEY
Subjt:  EQPKIPVPVVGPINFDEIRPCTGLPQEGDLIAYRLIELSSTWTPEISSFRVKFFYNVILCLTLCYHSPCVILVIFLFQAGKVSWYDAESNRIMLTPVPEY

Query:  PLPVKKEIDEDSELQLDTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEITSTKQTAESSKLVHINGDSNDARPGNGKVSAWDEISEALNAKKA
        P+PVKKEIDEDSELQ DTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEITS KQ AESSK VH NGD+ND R GNGKVSAWDEISEAL+AKK 
Subjt:  PLPVKKEIDEDSELQLDTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEITSTKQTAESSKLVHINGDSNDARPGNGKVSAWDEISEALNAKKA

Query:  ELSKNDGWNQEESSGRRLWSYRALRGSALGPTMALLRAQNEL
        ELSKN+GWNQEESSGR+ WSYRALRGSALGPTMALLR+Q EL
Subjt:  ELSKNDGWNQEESSGRRLWSYRALRGSALGPTMALLRAQNEL

XP_031741125.1 coilin isoform X1 [Cucumis sativus]

4.1e-290

84.27

Show/hide

Query:  MMEAVRLRVLFKDKDLLTESLTGLSRSWIVLKPHLRTISDLSSYILSVFRLQDACPNGLILSMDGFVLPPFESVCILKDKDIVRVKKKKSKAISLNDGNR
        MMEAVRLRV FKDKDLLT+SLTGLSRSWIVLKPHLRTISDLSSYILS+F L DACPNG+ILSMDGFVLPPFESVCILKDKDIVRVKKKKSKA  L  GNR
Subjt:  MMEAVRLRVLFKDKDLLTESLTGLSRSWIVLKPHLRTISDLSSYILSVFRLQDACPNGLILSMDGFVLPPFESVCILKDKDIVRVKKKKSKAISLNDGNR

Query:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESESEEDEPNATLPVKAAPIEKRVSKKRKASKIIRNSKRKKNKSSLTEEFPTIVADVQHANEKHEERN
        LIETEEFRERKPVDKGVKLLADKEFENESNGYES+SEEDE NATL VKA P+ K+VSKKRKASKIIR SKRKKNKSS TEEFPTIVADVQH++EKHEE+N
Subjt:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESESEEDEPNATLPVKAAPIEKRVSKKRKASKIIRNSKRKKNKSSLTEEFPTIVADVQHANEKHEERN

Query:  HLKSDHPQKVLVSKNDSSSSSSKCESDTSSSIENDGRSNNIVKSTAIAERADQLGAGGKHVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQNEEQQQK
        HLKSD PQKVLVSK DSSSSSS+C+SDTSS++E  GRSNNI+KST  AER DQLGAG +HVELSDTAGESKK PSRSTRRKKAKRRWLRERAQNEEQQQ+
Subjt:  HLKSDHPQKVLVSKNDSSSSSSKCESDTSSSIENDGRSNNIVKSTAIAERADQLGAGGKHVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQNEEQQQK

Query:  VFETSLDQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVSDQAEQQKQNHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSNNCTGEPLQLPSEET
        +FETSL+QGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVV+DQA Q+KQNHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSN+C+ EPLQL S ET
Subjt:  VFETSLDQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVSDQAEQQKQNHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSNNCTGEPLQLPSEET

Query:  EQPKIPVPVVGPINFDEIRPCTGLPQEGDLIAYRLIELSSTWTPEISSFRVKFFYNVILCLTLCYHSPCVILVIFLFQAGKVSWYDAESNRIMLTPVPEY
        EQPK PVPVVG INFDE+RP TGLPQEGDLIAYRLIELSSTWTPEISSFR                            AGKVSWYD ESNRIML PVPEY
Subjt:  EQPKIPVPVVGPINFDEIRPCTGLPQEGDLIAYRLIELSSTWTPEISSFRVKFFYNVILCLTLCYHSPCVILVIFLFQAGKVSWYDAESNRIMLTPVPEY

Query:  PLPVKKEIDEDSELQLDTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEITSTKQTAESSKLVHINGDSNDARPGNGKVSAWDEISEALNAKKA
        PLPVKKEIDEDSELQ DTTPYGEDGSLKIDFASLVDLR+IRQGNLDSSRTAVNQEITS KQ AESSK VH N D+N+ R GNGKVSAWDEISEAL+AKK 
Subjt:  PLPVKKEIDEDSELQLDTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEITSTKQTAESSKLVHINGDSNDARPGNGKVSAWDEISEALNAKKA

Query:  ELSKNDGWNQEESSGRRLWSYRALRGSALGPTMALLRAQNEL
        ELSKN+GWNQE+SSGR+ WSYRALRGSALGPTMALLR+Q EL
Subjt:  ELSKNDGWNQEESSGRRLWSYRALRGSALGPTMALLRAQNEL

XP_038892497.1 coilin isoform X1 [Benincasa hispida]

6.2e-302

83.56

Show/hide

Query:  MMEAVRLRVLFKDKDLLTESLTGLSRSWIVLKPHLRTISDLSSYILSVFRLQDACPNGLILSMDGFVLPPFESVCILKDKDIVRVKKKKSKAISLNDGNR
        +MEAVRLRVLFKDKDLLTESLTGLSRSWIVLKPHLRTISDLS+YILSVF L DACPNGLILSMDGFVLPPFESVCILKDKDIVRVKKKKSKAISL+DGN 
Subjt:  MMEAVRLRVLFKDKDLLTESLTGLSRSWIVLKPHLRTISDLSSYILSVFRLQDACPNGLILSMDGFVLPPFESVCILKDKDIVRVKKKKSKAISLNDGNR

Query:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESESEEDEPNATLPVKAAPIEKRVSKKRKASKIIRNSKRKKNKSSLTEEFPTIVADVQHANEKHEERN
        LIETEEFRERKPVDKGVKLLADKEFENESNGYE++SEEDEPNATLPVK+ P+EK+VSKKRKASKIIRNSKRKKNK S +EEFPTIVADVQHANEK EERN
Subjt:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESESEEDEPNATLPVKAAPIEKRVSKKRKASKIIRNSKRKKNKSSLTEEFPTIVADVQHANEKHEERN

Query:  HLKSDHPQKVLVSKNDSSSSSSKCESDTSSSIENDGRSNNIVKSTAIAERADQLGAGGKHVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQNEEQQQK
        HLKS+  QKVLVSKNDS+SSSSKCE DTSSS+E +GRSNNI+KST  AER DQLGAGG+HVELSDTAG+SKKGPSRS+RRKKAKRRWLRERAQNEEQQQ+
Subjt:  HLKSDHPQKVLVSKNDSSSSSSKCESDTSSSIENDGRSNNIVKSTAIAERADQLGAGGKHVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQNEEQQQK

Query:  VFETSLDQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVSDQAEQQKQNHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSNNCT-----------
        +FETSLDQG SQNDDVDMDDDTVPVVVKPGHIRFEPVGKV++DQA QQKQNHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSNNCT           
Subjt:  VFETSLDQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVSDQAEQQKQNHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSNNCT-----------

Query:  ----------------GEPLQLPSEETEQPKIPVPVVGPINFDEIRPCTGLPQEGDLIAYRLIELSSTWTPEISSFRVKFFYNVILCLTLCYHSPCVILV
                        GEPLQLPS ETEQPK PVPV GPINFDE++PCTGLPQEGDLIAYRLIELSSTWTPEISSFR                       
Subjt:  ----------------GEPLQLPSEETEQPKIPVPVVGPINFDEIRPCTGLPQEGDLIAYRLIELSSTWTPEISSFRVKFFYNVILCLTLCYHSPCVILV

Query:  IFLFQAGKVSWYDAESNRIMLTPVPEYPLPVKKEIDEDSELQLDTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEITSTKQTAESSKLVHING
             AGKVSWY+A+SNRIML PVPEYPLPVKKEI+EDSEL LDTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEI STKQT ESSKLV ING
Subjt:  IFLFQAGKVSWYDAESNRIMLTPVPEYPLPVKKEIDEDSELQLDTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEITSTKQTAESSKLVHING

Query:  DSNDARPGNGKVSAWDEISEALNAKKAELSKNDGWNQEESSGRRLWSYRALRGSALGPTMALLRAQNEL
        D+ND R GNGKVSAWDEISEAL+AKKAELSKNDGWNQEESSGRR WSYRALRGSALGPTMALLRAQNEL
Subjt:  DSNDARPGNGKVSAWDEISEALNAKKAELSKNDGWNQEESSGRRLWSYRALRGSALGPTMALLRAQNEL

XP_038892498.1 coilin isoform X2 [Benincasa hispida]

5.8e-300

83.41

Show/hide

Query:  MMEAVRLRVLFKDKDLLTESLTGLSRSWIVLKPHLRTISDLSSYILSVFRLQDACPNGLILSMDGFVLPPFESVCILKDKDIVRVKKKKSKAISLNDGNR
        +MEAVRLRVLFKDKDLLTESLTGLSRSWIVLKPHLRTISDLS+YILSVF L DACPNGLILSMDGFVLPPFESVCILKDKDIVRVKKKKSKAISL+DGN 
Subjt:  MMEAVRLRVLFKDKDLLTESLTGLSRSWIVLKPHLRTISDLSSYILSVFRLQDACPNGLILSMDGFVLPPFESVCILKDKDIVRVKKKKSKAISLNDGNR

Query:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESESEEDEPNATLPVKAAPIEKRVSKKRKASKIIRNSKRKKNKSSLTEEFPTIVADVQHANEKHEERN
        LIETEEFRERKPVDKGVKLLADKEFENESNGYE++SEEDEPNATLPVK+ P+EK+VSKKRKASKIIRNSKRKKNK S +EEFPTIVADVQHANEK EERN
Subjt:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESESEEDEPNATLPVKAAPIEKRVSKKRKASKIIRNSKRKKNKSSLTEEFPTIVADVQHANEKHEERN

Query:  HLKSDHPQKVLVSKNDSSSSSSKCESDTSSSIENDGRSNNIVKSTAIAERADQLGAGGKHVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQNEEQQQK
        HLKS+  QKVLVSKNDS+SSSSKCE DTSSS+E +GRSNNI+KST  AER DQLGAGG+HVELSDTAG+SKKGPSRS+RRKKAKRRWLRERAQNEEQQ  
Subjt:  HLKSDHPQKVLVSKNDSSSSSSKCESDTSSSIENDGRSNNIVKSTAIAERADQLGAGGKHVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQNEEQQQK

Query:  VFETSLDQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVSDQAEQQKQNHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSNNCT-----------
        +FETSLDQG SQNDDVDMDDDTVPVVVKPGHIRFEPVGKV++DQA QQKQNHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSNNCT           
Subjt:  VFETSLDQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVSDQAEQQKQNHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSNNCT-----------

Query:  ----------------GEPLQLPSEETEQPKIPVPVVGPINFDEIRPCTGLPQEGDLIAYRLIELSSTWTPEISSFRVKFFYNVILCLTLCYHSPCVILV
                        GEPLQLPS ETEQPK PVPV GPINFDE++PCTGLPQEGDLIAYRLIELSSTWTPEISSFR                       
Subjt:  ----------------GEPLQLPSEETEQPKIPVPVVGPINFDEIRPCTGLPQEGDLIAYRLIELSSTWTPEISSFRVKFFYNVILCLTLCYHSPCVILV

Query:  IFLFQAGKVSWYDAESNRIMLTPVPEYPLPVKKEIDEDSELQLDTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEITSTKQTAESSKLVHING
             AGKVSWY+A+SNRIML PVPEYPLPVKKEI+EDSEL LDTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEI STKQT ESSKLV ING
Subjt:  IFLFQAGKVSWYDAESNRIMLTPVPEYPLPVKKEIDEDSELQLDTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEITSTKQTAESSKLVHING

Query:  DSNDARPGNGKVSAWDEISEALNAKKAELSKNDGWNQEESSGRRLWSYRALRGSALGPTMALLRAQNEL
        D+ND R GNGKVSAWDEISEAL+AKKAELSKNDGWNQEESSGRR WSYRALRGSALGPTMALLRAQNEL
Subjt:  DSNDARPGNGKVSAWDEISEALNAKKAELSKNDGWNQEESSGRRLWSYRALRGSALGPTMALLRAQNEL

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BF15 Coilin

4.8e-292

84.42

Show/hide

Query:  MMEAVRLRVLFKDKDLLTESLTGLSRSWIVLKPHLRTISDLSSYILSVFRLQDACPNGLILSMDGFVLPPFESVCILKDKDIVRVKKKKSKAISLNDGNR
        MMEAVRLRV FKDKDLLT+SLTGLSRSWI LKPHLRTISDLSSYILSVFRL DACPNG+ILSMDGFVLPPFESVCILKD+DIVRVKKKKSKA  L +G+R
Subjt:  MMEAVRLRVLFKDKDLLTESLTGLSRSWIVLKPHLRTISDLSSYILSVFRLQDACPNGLILSMDGFVLPPFESVCILKDKDIVRVKKKKSKAISLNDGNR

Query:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESESEEDEPNATLPVKAAPIEKRVSKKRKASKIIRNSKRKKNKSSLTEEFPTIVADVQHANEKHEERN
        LIETEEFRERKPVD GVK LADKEFENESNGYES+SEEDE NATLPVKA P+ K+VSKKRKASKII NSKRKKNKSS TEEFPTI+ADV+H +EKHEERN
Subjt:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESESEEDEPNATLPVKAAPIEKRVSKKRKASKIIRNSKRKKNKSSLTEEFPTIVADVQHANEKHEERN

Query:  HLKSDHPQKVLVSKNDSSSSSSKCESDTSSSIENDGRSNNIVKSTAIAERADQLGAGGKHVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQNEEQQQK
        HLKS+ PQKVLVSK DSSSSSS+C+SDTSSSIE  G+SNNI+KST  AER DQLGAG  HVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQNEEQQQ+
Subjt:  HLKSDHPQKVLVSKNDSSSSSSKCESDTSSSIENDGRSNNIVKSTAIAERADQLGAGGKHVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQNEEQQQK

Query:  VFETSLDQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVSDQAEQQKQNHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSNNCTGEPLQLPSEET
        +FET+LDQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVV+DQA Q+K+NHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSN CT EPLQL S ET
Subjt:  VFETSLDQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVSDQAEQQKQNHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSNNCTGEPLQLPSEET

Query:  EQPKIPVPVVGPINFDEIRPCTGLPQEGDLIAYRLIELSSTWTPEISSFRVKFFYNVILCLTLCYHSPCVILVIFLFQAGKVSWYDAESNRIMLTPVPEY
        EQPK PVPVVG INFDE+RP TGLPQEGDLIAYRLIELSSTWTPEISSFR                            AGKVSWYD ESNRIML PVPEY
Subjt:  EQPKIPVPVVGPINFDEIRPCTGLPQEGDLIAYRLIELSSTWTPEISSFRVKFFYNVILCLTLCYHSPCVILVIFLFQAGKVSWYDAESNRIMLTPVPEY

Query:  PLPVKKEIDEDSELQLDTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEITSTKQTAESSKLVHINGDSNDARPGNGKVSAWDEISEALNAKKA
        P+PVKKEIDEDSELQ DTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEITS KQ AESSK VH NGD+ND R GNGKVSAWDEISEAL+AKK 
Subjt:  PLPVKKEIDEDSELQLDTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEITSTKQTAESSKLVHINGDSNDARPGNGKVSAWDEISEALNAKKA

Query:  ELSKNDGWNQEESSGRRLWSYRALRGSALGPTMALLRAQNEL
        ELSKN+GWNQEESSGR+ WSYRALRGSALGPTMALLR+Q EL
Subjt:  ELSKNDGWNQEESSGRRLWSYRALRGSALGPTMALLRAQNEL

A0A1S3BF70 Coilin

4.5e-290

84.27

Show/hide

Query:  MMEAVRLRVLFKDKDLLTESLTGLSRSWIVLKPHLRTISDLSSYILSVFRLQDACPNGLILSMDGFVLPPFESVCILKDKDIVRVKKKKSKAISLNDGNR
        MMEAVRLRV FKDKDLLT+SLTGLSRSWI LKPHLRTISDLSSYILSVFRL DACPNG+ILSMDGFVLPPFESVCILKD+DIVRVKKKKSKA  L +G+R
Subjt:  MMEAVRLRVLFKDKDLLTESLTGLSRSWIVLKPHLRTISDLSSYILSVFRLQDACPNGLILSMDGFVLPPFESVCILKDKDIVRVKKKKSKAISLNDGNR

Query:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESESEEDEPNATLPVKAAPIEKRVSKKRKASKIIRNSKRKKNKSSLTEEFPTIVADVQHANEKHEERN
        LIETEEFRERKPVD GVK LADKEFENESNGYES+SEEDE NATLPVKA P+ K+VSKKRKASKII NSKRKKNKSS TEEFPTI+ADV+H +EKHEERN
Subjt:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESESEEDEPNATLPVKAAPIEKRVSKKRKASKIIRNSKRKKNKSSLTEEFPTIVADVQHANEKHEERN

Query:  HLKSDHPQKVLVSKNDSSSSSSKCESDTSSSIENDGRSNNIVKSTAIAERADQLGAGGKHVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQNEEQQQK
        HLKS+ PQKVLVSK DSSSSSS+C+SDTSSSIE  G+SNNI+KST  AER DQLGAG  HVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQNEEQQ  
Subjt:  HLKSDHPQKVLVSKNDSSSSSSKCESDTSSSIENDGRSNNIVKSTAIAERADQLGAGGKHVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQNEEQQQK

Query:  VFETSLDQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVSDQAEQQKQNHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSNNCTGEPLQLPSEET
        +FET+LDQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVV+DQA Q+K+NHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSN CT EPLQL S ET
Subjt:  VFETSLDQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVSDQAEQQKQNHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSNNCTGEPLQLPSEET

Query:  EQPKIPVPVVGPINFDEIRPCTGLPQEGDLIAYRLIELSSTWTPEISSFRVKFFYNVILCLTLCYHSPCVILVIFLFQAGKVSWYDAESNRIMLTPVPEY
        EQPK PVPVVG INFDE+RP TGLPQEGDLIAYRLIELSSTWTPEISSFR                            AGKVSWYD ESNRIML PVPEY
Subjt:  EQPKIPVPVVGPINFDEIRPCTGLPQEGDLIAYRLIELSSTWTPEISSFRVKFFYNVILCLTLCYHSPCVILVIFLFQAGKVSWYDAESNRIMLTPVPEY

Query:  PLPVKKEIDEDSELQLDTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEITSTKQTAESSKLVHINGDSNDARPGNGKVSAWDEISEALNAKKA
        P+PVKKEIDEDSELQ DTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEITS KQ AESSK VH NGD+ND R GNGKVSAWDEISEAL+AKK 
Subjt:  PLPVKKEIDEDSELQLDTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEITSTKQTAESSKLVHINGDSNDARPGNGKVSAWDEISEALNAKKA

Query:  ELSKNDGWNQEESSGRRLWSYRALRGSALGPTMALLRAQNEL
        ELSKN+GWNQEESSGR+ WSYRALRGSALGPTMALLR+Q EL
Subjt:  ELSKNDGWNQEESSGRRLWSYRALRGSALGPTMALLRAQNEL

A0A5A7ST29 Coilin

1.2e-290

84.29

Show/hide

Query:  MMEAVRLRVLFKDKDLLTESLTGLSRSWIVLKPHLRTISDLSSYILSVFRLQDACPNGLILSMDGFVLPPFESVCILKDKDIVRVKKKKSKAISLNDGNR
        MMEAVRLRV FKDKDLLT+SLTGLSRSWI LKPHLRTISDLSSYILSVFRL DACPNG+ILSMDGFVLPPFESVCILKD+DIVRVKKKKSKA  L +G+R
Subjt:  MMEAVRLRVLFKDKDLLTESLTGLSRSWIVLKPHLRTISDLSSYILSVFRLQDACPNGLILSMDGFVLPPFESVCILKDKDIVRVKKKKSKAISLNDGNR

Query:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESESEEDEPNATLPVKAAPIEKRVSKKRKASKIIRNSKRKKNKSSLTEEFPTIVADVQHANEKHEERN
        LIETEEFRERKPVD GVK LADKEFENESNGYES+SEEDE NATLPVKA P+ K+VSKKRKASKII NSKRKKNKSS TEEFPTI+ADV+H +EKHEERN
Subjt:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESESEEDEPNATLPVKAAPIEKRVSKKRKASKIIRNSKRKKNKSSLTEEFPTIVADVQHANEKHEERN

Query:  HLKSDHPQKVLVSKNDSSSSSSKCESDTSSSIENDGRSNNIVKSTAIAER-ADQLGAGGKHVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQNEEQQQ
        HLKS+ PQKVLVSK DSSSSSS+C+SDTSSSIE  G+SNNI+KST  AER  DQLGAG  HVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQNEEQQQ
Subjt:  HLKSDHPQKVLVSKNDSSSSSSKCESDTSSSIENDGRSNNIVKSTAIAER-ADQLGAGGKHVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQNEEQQQ

Query:  KVFETSLDQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVSDQAEQQKQNHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSNNCTGEPLQLPSEE
        ++FET+LDQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVV+DQA Q+K+NHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSN CT EPLQL S E
Subjt:  KVFETSLDQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVSDQAEQQKQNHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSNNCTGEPLQLPSEE

Query:  TEQPKIPVPVVGPINFDEIRPCTGLPQEGDLIAYRLIELSSTWTPEISSFRVKFFYNVILCLTLCYHSPCVILVIFLFQAGKVSWYDAESNRIMLTPVPE
        TEQPK PVPVVG INFDE+RP TGLPQEGDLIAYRLIELSSTWTPEISSFR                            AGKVSWYD ESNRIML PVPE
Subjt:  TEQPKIPVPVVGPINFDEIRPCTGLPQEGDLIAYRLIELSSTWTPEISSFRVKFFYNVILCLTLCYHSPCVILVIFLFQAGKVSWYDAESNRIMLTPVPE

Query:  YPLPVKKEIDEDSELQLDTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEITSTKQTAESSKLVHINGDSNDARPGNGKVSAWDEISEALNAKK
        YP+PVKKEIDEDSELQ DTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEITS KQ AESSK VH NGD+ND R GNGKVSAWDEISEAL+AKK
Subjt:  YPLPVKKEIDEDSELQLDTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEITSTKQTAESSKLVHINGDSNDARPGNGKVSAWDEISEALNAKK

Query:  AELSKNDGWNQEESSGRRLWSYRALRGSALGPTMALLRAQNEL
         ELSKN+GWNQEESSGR+ WSYRALRGSALGPTMALLR+Q EL
Subjt:  AELSKNDGWNQEESSGRRLWSYRALRGSALGPTMALLRAQNEL

A0A6J1DEE4 Coilin

2.1e-279

80.06

Show/hide

Query:  MMEAVRLRVLFKDKDLLTESLT--GLSRSWIVLKPHLRTISDLSSYILSVFRLQDACPNGLILSMDGFVLPPFESVCILKDKDIVRVKKKKSKAISLNDG
        MME VRLRVLF+DKDLLTESL+  GLSRSWIVLK HLRTISDLSSYILSVFRLQDACP GLILSMDGFVLPPFESVCILKDKDIVRVKK+KSKAI+L  G
Subjt:  MMEAVRLRVLFKDKDLLTESLT--GLSRSWIVLKPHLRTISDLSSYILSVFRLQDACPNGLILSMDGFVLPPFESVCILKDKDIVRVKKKKSKAISLNDG

Query:  NRLIETEEFRERKPVDKGVKLLADKEFENESNGYESESEEDEPNATLPVKAAPIEKRVSKKRKASKIIRNSKRKKNKSSLTEEFPTIVADVQHANEKHEE
        N LI TEEFRERKPVD GVKLLADKEFENES+GYESESEE++P ATLPV+A+P+ K+VSKKRKASKIIRNSKRKKNKSS TEEFPTI+ADVQHANEKHEE
Subjt:  NRLIETEEFRERKPVDKGVKLLADKEFENESNGYESESEEDEPNATLPVKAAPIEKRVSKKRKASKIIRNSKRKKNKSSLTEEFPTIVADVQHANEKHEE

Query:  RNHLKSDH---PQKVLVSKNDSSSSSSKCESDTSSSIENDGRSNNIVKSTAIAERADQLGAGGKHVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQNE
          HLKS+    PQKVLV+KNDSSSSSS+CESDTS++ E DGRS N ++STA A+R DQLG G +HVE S TA ESKKGPSRS+RRKKAKRRWLRE+AQNE
Subjt:  RNHLKSDH---PQKVLVSKNDSSSSSSKCESDTSSSIENDGRSNNIVKSTAIAERADQLGAGGKHVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQNE

Query:  EQQQKVFETSLDQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVSDQAEQQKQNHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSNNCTGEPLQL
        E+QQ++ ETS+DQGPSQNDDVDMDD+TVPVVVKPGHIRFEP+GKV +DQA +QKQ+HFP ETLHWNGITNKKKGQKWGKEKTPSWKRNNSNN TGEPLQL
Subjt:  EQQQKVFETSLDQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVSDQAEQQKQNHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSNNCTGEPLQL

Query:  PSEETEQPKIPVPVVGPINFDEIRPCTGLPQEGDLIAYRLIELSSTWTPEISSFRVKFFYNVILCLTLCYHSPCVILVIFLFQAGKVSWYDAESNRIMLT
        P+ ETEQPK P PVVGPINFDE+RPCTG PQEGDL+AYRLIELSSTWTPEISSFRV                            GKVSWYD ESNRIML 
Subjt:  PSEETEQPKIPVPVVGPINFDEIRPCTGLPQEGDLIAYRLIELSSTWTPEISSFRVKFFYNVILCLTLCYHSPCVILVIFLFQAGKVSWYDAESNRIMLT

Query:  PVPEYPLPVKKEIDEDSELQLDTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEITSTKQTAESSKLVHINGDSNDARPGNGKVSAWDEISEAL
        PVPEYPL  KKEIDEDS  Q DTTPYGEDGSLKIDFASLVDLRLI+QGNLDSS+ AVN+EITS  QTAESS  +H NGD+N+A+ GNGKVSAWDEISEAL
Subjt:  PVPEYPLPVKKEIDEDSELQLDTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEITSTKQTAESSKLVHINGDSNDARPGNGKVSAWDEISEAL

Query:  NAKKAELSKNDGWNQEESSGRRLWSYRALRGSALGPTMALLRAQNEL
        +AKKAELS+NDGWNQEESSGRR WS+R LRGSALGP MALLRAQNEL
Subjt:  NAKKAELSKNDGWNQEESSGRRLWSYRALRGSALGPTMALLRAQNEL

A0A6J1H0F7 Coilin

4.3e-277

80.37

Show/hide

Query:  MMEAVRLRVLFKDKDLLTESLTGLSRSWIVLKPHLRTISDLSSYILSVFRLQDACPNGLILSMDGFVLPPFESVCILKDKDIVRVKKKKSKAISLNDGNR
        MMEAVRLRV FKDKDLLTESLTGL RSWIVLKPHLRTISDLSSYILSVF L DACPNGL LSMDGFVLPPFESVCILKDKDIVRVKKKKSKAI       
Subjt:  MMEAVRLRVLFKDKDLLTESLTGLSRSWIVLKPHLRTISDLSSYILSVFRLQDACPNGLILSMDGFVLPPFESVCILKDKDIVRVKKKKSKAISLNDGNR

Query:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESESEEDEPNATLPVKAAPIEKRVSKKRKASKIIRNSKRKKNKSSLTEEFPTIVADVQHANEKHEERN
            +EFRE+K VD+GVKLLADKEFENES+GYESE EEDEP ATLPV  AP+EK+VSKKRKASKI  NSKRKK KSS TEEFP+I+ADVQ AN+KHEERN
Subjt:  LIETEEFRERKPVDKGVKLLADKEFENESNGYESESEEDEPNATLPVKAAPIEKRVSKKRKASKIIRNSKRKKNKSSLTEEFPTIVADVQHANEKHEERN

Query:  HLKSDHPQKVLVSKNDSSSSSSKCESDTSSSIENDGRSNNIVKSTAIAERADQLGAGGKHVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQNEEQQQK
        HLK + PQKV+V KNDSS SSS+C+S +   IE DGRSNNI+KSTA AER DQLG GG+ VELSDTAGE+KKGPSRSTRRKKAKR+WLRERAQ+EEQQQ+
Subjt:  HLKSDHPQKVLVSKNDSSSSSSKCESDTSSSIENDGRSNNIVKSTAIAERADQLGAGGKHVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQNEEQQQK

Query:  VFETSLDQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVSDQAEQQKQNHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSNNCTGEPLQLPSEET
        +FETS+ QGPS NDDVDMD+DTVPVVVKPGHIRFEPVGKV +D A QQKQNHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSN+CT EPLQLP+ ET
Subjt:  VFETSLDQGPSQNDDVDMDDDTVPVVVKPGHIRFEPVGKVVSDQAEQQKQNHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSNNCTGEPLQLPSEET

Query:  EQPKIPVPVVGPINFDEIRPCTGLPQEGDLIAYRLIELSSTWTPEISSFRVKFFYNVILCLTLCYHSPCVILVIFLFQAGKVSWYDAESNRIMLTPVPEY
        EQP  P PVVGPINFDE+RPCTGLPQEGDL+AYRLIELSSTWTPEISSFR                            AGKV+WYD ESNRIML PVPEY
Subjt:  EQPKIPVPVVGPINFDEIRPCTGLPQEGDLIAYRLIELSSTWTPEISSFRVKFFYNVILCLTLCYHSPCVILVIFLFQAGKVSWYDAESNRIMLTPVPEY

Query:  PLPVKKEIDEDSELQLDTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEITSTKQTAESSKLVHINGDSNDARPGNGKVSAWDEISEALNAKKA
        PLPVKKEIDEDS  QLDT PYGEDGSLKIDFASLVDLRLI QGNLDSSRTAVNQEIT  KQTAESSKL H NGD+ND + GNGKVSAWDEIS+AL+AKKA
Subjt:  PLPVKKEIDEDSELQLDTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEITSTKQTAESSKLVHINGDSNDARPGNGKVSAWDEISEALNAKKA

Query:  ELSKNDGWNQEESSGRRLWSYRALRGSALGPTMALLRAQNEL
        ELSK+DG NQEESSG R WSYRALRGSALGPTMALLRAQNEL
Subjt:  ELSKNDGWNQEESSGRRLWSYRALRGSALGPTMALLRAQNEL

SwissProt top hits

e value

%identity

Alignment

Q8RWK8 Coilin

2.7e-98

39.05

Show/hide

Query:  EAVRLRVLFKDKDLLT--ESLTGLSRSWIVL--KPHLRTISDLSSYILSVFRLQDACPNGLILSMDGFVLPPFESVCILKDKDIVRVKKKKSKAISL---
        E VR+R++F+D+ +L+  +   GL+RSW+VL  K H RTIS+ S +I   F L +ACP+GL LSM+GFVLPPFES C+LKDKDIV VKKKK   + +   
Subjt:  EAVRLRVLFKDKDLLT--ESLTGLSRSWIVL--KPHLRTISDLSSYILSVFRLQDACPNGLILSMDGFVLPPFESVCILKDKDIVRVKKKKSKAISL---

Query:  NDGNRLIETEEFRERKPVDKGVKLLADKEFENESNGYESESEEDEPNATLPVKAAPI--EKRVSKKRKASKIIRNSKRKKNKSSLTEEFPTIVADVQHAN
        +    +    E  ER  +  G  LLA++EF+ E+ GYESESEEDE    L  +A     EK+ SKKRK S   +++KRKK K   TEE P          
Subjt:  NDGNRLIETEEFRERKPVDKGVKLLADKEFENESNGYESESEEDEPNATLPVKAAPI--EKRVSKKRKASKIIRNSKRKKNKSSLTEEFPTIVADVQHAN

Query:  EKHEERNHLKSDHPQKVLVSKNDSSSSSSKCESDTSSSIENDGRSNNIVKSTAIAERADQLGAGGKHVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQ
                   D  +   V  N       K   D  S+  ND ++N+  K    ++R+ Q     +H +L   + E+KK PSRS RRKKAKR+WLRE+ +
Subjt:  EKHEERNHLKSDHPQKVLVSKNDSSSSSSKCESDTSSSIENDGRSNNIVKSTAIAERADQLGAGGKHVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQ

Query:  NEEQQQKVFETSLDQGPSQNDDVDMD-------------------------DDTVPVVVKPGHIRFEPVGKVVSDQAEQQKQNHFPKETLHWNGITNKKK
         E+++  + +T L   PSQ   + +D                         D+ VPV V+PGHIRF+P+    +D+A    +     E + WNG   KKK
Subjt:  NEEQQQKVFETSLDQGPSQNDDVDMD-------------------------DDTVPVVVKPGHIRFEPVGKVVSDQAEQQKQNHFPKETLHWNGITNKKK

Query:  GQKWGKEKTPSWKRNNSNNCTGEPLQLPSEETEQPKIPVPVVG-PINFDEIRPCTGLPQEGDLIAYRLIELSSTWTPEISSFRVKFFYNVILCLTLCYHS
        GQKWG EK+   KR   +           + T QP     +   PI+++++   TG  ++GD+IAYRLIEL+S+WTPE+SSFRV                
Subjt:  GQKWGKEKTPSWKRNNSNNCTGEPLQLPSEETEQPKIPVPVVG-PINFDEIRPCTGLPQEGDLIAYRLIELSSTWTPEISSFRVKFFYNVILCLTLCYHS

Query:  PCVILVIFLFQAGKVSWYDAESNRIMLTPVPEYPLPVKKEIDEDSELQLDTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEITSTKQTAESSK
                    GK+S+YD +S  + L PV E+P+  K E D+D  +Q DT+ Y EDGSL+I+F++L+D+R ++  + DS+  A    +    Q+A+  K
Subjt:  PCVILVIFLFQAGKVSWYDAESNRIMLTPVPEYPLPVKKEIDEDSELQLDTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEITSTKQTAESSK

Query:  LVHINGDSNDARPGNGKVSAWDEISEALNAKKAELSK-NDGWNQEESSGRRLWSYRALRGSALGPTMALLRAQNEL
        L   N +       NG+VS W+E+SEAL+AKKA LS+ N+GWN++ SS    WSY+ALRGSA+GP M  LR+Q E+
Subjt:  LVHINGDSNDARPGNGKVSAWDEISEALNAKKAELSK-NDGWNQEESSGRRLWSYRALRGSALGPTMALLRAQNEL

Arabidopsis top hits

e value

%identity

Alignment

AT1G13030.1 sphere organelles protein-related

1.9e-99

39.05

Show/hide

Query:  EAVRLRVLFKDKDLLT--ESLTGLSRSWIVL--KPHLRTISDLSSYILSVFRLQDACPNGLILSMDGFVLPPFESVCILKDKDIVRVKKKKSKAISL---
        E VR+R++F+D+ +L+  +   GL+RSW+VL  K H RTIS+ S +I   F L +ACP+GL LSM+GFVLPPFES C+LKDKDIV VKKKK   + +   
Subjt:  EAVRLRVLFKDKDLLT--ESLTGLSRSWIVL--KPHLRTISDLSSYILSVFRLQDACPNGLILSMDGFVLPPFESVCILKDKDIVRVKKKKSKAISL---

Query:  NDGNRLIETEEFRERKPVDKGVKLLADKEFENESNGYESESEEDEPNATLPVKAAPI--EKRVSKKRKASKIIRNSKRKKNKSSLTEEFPTIVADVQHAN
        +    +    E  ER  +  G  LLA++EF+ E+ GYESESEEDE    L  +A     EK+ SKKRK S   +++KRKK K   TEE P          
Subjt:  NDGNRLIETEEFRERKPVDKGVKLLADKEFENESNGYESESEEDEPNATLPVKAAPI--EKRVSKKRKASKIIRNSKRKKNKSSLTEEFPTIVADVQHAN

Query:  EKHEERNHLKSDHPQKVLVSKNDSSSSSSKCESDTSSSIENDGRSNNIVKSTAIAERADQLGAGGKHVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQ
                   D  +   V  N       K   D  S+  ND ++N+  K    ++R+ Q     +H +L   + E+KK PSRS RRKKAKR+WLRE+ +
Subjt:  EKHEERNHLKSDHPQKVLVSKNDSSSSSSKCESDTSSSIENDGRSNNIVKSTAIAERADQLGAGGKHVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQ

Query:  NEEQQQKVFETSLDQGPSQNDDVDMD-------------------------DDTVPVVVKPGHIRFEPVGKVVSDQAEQQKQNHFPKETLHWNGITNKKK
         E+++  + +T L   PSQ   + +D                         D+ VPV V+PGHIRF+P+    +D+A    +     E + WNG   KKK
Subjt:  NEEQQQKVFETSLDQGPSQNDDVDMD-------------------------DDTVPVVVKPGHIRFEPVGKVVSDQAEQQKQNHFPKETLHWNGITNKKK

Query:  GQKWGKEKTPSWKRNNSNNCTGEPLQLPSEETEQPKIPVPVVG-PINFDEIRPCTGLPQEGDLIAYRLIELSSTWTPEISSFRVKFFYNVILCLTLCYHS
        GQKWG EK+   KR   +           + T QP     +   PI+++++   TG  ++GD+IAYRLIEL+S+WTPE+SSFRV                
Subjt:  GQKWGKEKTPSWKRNNSNNCTGEPLQLPSEETEQPKIPVPVVG-PINFDEIRPCTGLPQEGDLIAYRLIELSSTWTPEISSFRVKFFYNVILCLTLCYHS

Query:  PCVILVIFLFQAGKVSWYDAESNRIMLTPVPEYPLPVKKEIDEDSELQLDTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEITSTKQTAESSK
                    GK+S+YD +S  + L PV E+P+  K E D+D  +Q DT+ Y EDGSL+I+F++L+D+R ++  + DS+  A    +    Q+A+  K
Subjt:  PCVILVIFLFQAGKVSWYDAESNRIMLTPVPEYPLPVKKEIDEDSELQLDTTPYGEDGSLKIDFASLVDLRLIRQGNLDSSRTAVNQEITSTKQTAESSK

Query:  LVHINGDSNDARPGNGKVSAWDEISEALNAKKAELSK-NDGWNQEESSGRRLWSYRALRGSALGPTMALLRAQNEL
        L   N +       NG+VS W+E+SEAL+AKKA LS+ N+GWN++ SS    WSY+ALRGSA+GP M  LR+Q E+
Subjt:  LVHINGDSNDARPGNGKVSAWDEISEALNAKKAELSK-NDGWNQEESSGRRLWSYRALRGSALGPTMALLRAQNEL

AT3G26360.1 Ribosomal protein S21 family protein

3.4e-24

62.14

Show/hide

Query:  MNSLARNVSCFIRSSIHTTDSLHCQQQQWRGIRVKVLNGNLERALAILQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKVRSKELARTLKSILI
        MN++A+ V+  +     T  SL+ Q QQ RGIRVKV + +L++AL ILQ+KMQSSG+ERLIK  QTHHIKNSEK+VLARKNLER+++S + AR L+SILI
Subjt:  MNSLARNVSCFIRSSIHTTDSLHCQQQQWRGIRVKVLNGNLERALAILQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKVRSKELARTLKSILI

Query:  KKV
        KKV
Subjt:  KKV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAACTCGTTGGCGCGGAACGTATCATGCTTCATCAGGTCTTCGATTCACACCACTGACTCGTTACATTGCCAGCAGCAGCAATGGAGGGGGATCCGAGTGAAGGTATT
GAACGGGAATCTAGAGCGGGCACTGGCAATTTTGCAAAGGAAGATGCAATCGAGCGGAATCGAGCGGCTGATTAAGCGCGAACAGACACATCACATCAAGAATTCCGAAA
AACGAGTTTTGGCACGAAAGAATTTGGAGCGCAAAGTTCGATCGAAGGAACTTGCTCGCACGCTCAAATCCATCCTTATAAAGAAAGTCAGTTCTACGTTCTTCGCCGCC
ATTTTCCCTCCTCTCTGCTGCATGATGGAGGCTGTGAGACTGCGAGTTCTGTTCAAAGACAAGGACCTACTCACCGAGTCGCTCACAGGGTTGAGCCGGAGCTGGATTGT
CCTAAAACCTCATCTCCGAACTATTTCCGACCTATCCTCCTACATCCTTTCTGTTTTCCGTCTTCAAGATGCTTGCCCCAACGGTCTCATCCTTTCTATGGATGGCTTTG
TGTTACCACCATTTGAGTCGGTGTGTATCTTGAAGGATAAGGACATTGTCAGAGTGAAGAAGAAAAAAAGTAAGGCAATCAGTCTCAATGATGGTAACAGATTGATCGAA
ACTGAGGAATTCAGGGAAAGGAAACCTGTTGACAAAGGAGTGAAGCTTCTGGCTGACAAGGAGTTTGAAAATGAATCTAATGGCTATGAGAGTGAATCAGAGGAAGATGA
ACCTAATGCTACTTTGCCAGTGAAAGCTGCGCCAATAGAAAAAAGAGTGTCCAAGAAAAGAAAAGCTTCAAAGATAATTCGCAACTCGAAGAGGAAGAAAAATAAATCTT
CCCTTACTGAAGAATTTCCAACTATCGTAGCAGATGTTCAGCATGCCAATGAAAAACATGAAGAAAGAAATCATCTGAAGTCCGACCACCCACAAAAGGTTCTAGTAAGC
AAAAATGATTCATCCAGCAGTTCTAGTAAATGTGAATCAGATACATCCAGCAGCATTGAAAATGATGGAAGAAGCAACAATATTGTTAAGTCAACTGCTATTGCAGAGAG
GGCTGATCAGCTTGGAGCTGGCGGGAAACATGTTGAGTTGTCTGACACAGCTGGTGAAAGTAAAAAGGGTCCTAGTAGAAGTACTCGCCGTAAGAAGGCAAAAAGGCGTT
GGTTGAGGGAAAGAGCTCAAAATGAAGAGCAACAGCAGAAGGTATTTGAAACAAGTTTAGATCAAGGACCTAGTCAAAATGATGATGTTGATATGGATGATGACACTGTT
CCCGTGGTAGTTAAGCCAGGACACATTCGCTTTGAGCCAGTTGGAAAAGTTGTTTCGGATCAGGCTGAGCAGCAGAAGCAAAACCATTTCCCTAAGGAAACATTGCATTG
GAATGGCATCACCAACAAGAAGAAGGGTCAAAAATGGGGCAAAGAGAAAACCCCATCTTGGAAGAGGAACAATTCCAACAATTGTACAGGCGAACCTCTTCAGTTACCTT
CTGAAGAAACTGAGCAACCTAAAATTCCGGTTCCTGTAGTTGGTCCAATAAATTTTGATGAAATTCGACCGTGCACTGGCTTGCCTCAGGAAGGTGATTTAATTGCATAT
CGTTTGATTGAGTTATCATCAACCTGGACACCTGAGATTTCCTCCTTCCGAGTAAAGTTCTTCTACAATGTGATTCTCTGTCTGACTCTTTGTTACCACAGCCCATGTGT
TATTCTAGTAATTTTCCTATTTCAGGCTGGAAAAGTATCATGGTACGACGCTGAATCCAATCGGATTATGCTAACACCGGTTCCAGAATATCCACTACCTGTCAAAAAGG
AGATTGACGAGGATTCTGAATTACAATTGGATACAACCCCGTATGGGGAAGATGGCTCTTTAAAGATAGATTTTGCCTCTCTTGTTGATCTTCGGCTTATCAGGCAAGGA
AACTTGGATTCTTCAAGAACTGCAGTTAACCAGGAAATCACTTCTACTAAACAAACTGCAGAAAGTTCCAAGCTCGTCCATATCAATGGAGATTCCAACGATGCTAGACC
AGGTAATGGAAAAGTAAGCGCGTGGGATGAAATCAGTGAAGCTCTGAATGCAAAGAAAGCGGAACTTTCTAAGAATGATGGTTGGAATCAAGAAGAAAGTTCAGGAAGGA
GGCTATGGTCCTATAGAGCACTCAGAGGCAGCGCCCTTGGTCCAACAATGGCTCTCTTAAGAGCTCAGAATGAACTTTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MNSLARNVSCFIRSSIHTTDSLHCQQQQWRGIRVKVLNGNLERALAILQRKMQSSGIERLIKREQTHHIKNSEKRVLARKNLERKVRSKELARTLKSILIKKVSSTFFAA
IFPPLCCMMEAVRLRVLFKDKDLLTESLTGLSRSWIVLKPHLRTISDLSSYILSVFRLQDACPNGLILSMDGFVLPPFESVCILKDKDIVRVKKKKSKAISLNDGNRLIE
TEEFRERKPVDKGVKLLADKEFENESNGYESESEEDEPNATLPVKAAPIEKRVSKKRKASKIIRNSKRKKNKSSLTEEFPTIVADVQHANEKHEERNHLKSDHPQKVLVS
KNDSSSSSSKCESDTSSSIENDGRSNNIVKSTAIAERADQLGAGGKHVELSDTAGESKKGPSRSTRRKKAKRRWLRERAQNEEQQQKVFETSLDQGPSQNDDVDMDDDTV
PVVVKPGHIRFEPVGKVVSDQAEQQKQNHFPKETLHWNGITNKKKGQKWGKEKTPSWKRNNSNNCTGEPLQLPSEETEQPKIPVPVVGPINFDEIRPCTGLPQEGDLIAY
RLIELSSTWTPEISSFRVKFFYNVILCLTLCYHSPCVILVIFLFQAGKVSWYDAESNRIMLTPVPEYPLPVKKEIDEDSELQLDTTPYGEDGSLKIDFASLVDLRLIRQG
NLDSSRTAVNQEITSTKQTAESSKLVHINGDSNDARPGNGKVSAWDEISEALNAKKAELSKNDGWNQEESSGRRLWSYRALRGSALGPTMALLRAQNEL

Lsi04G006050 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome