; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G006260 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G006260
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPectin lyase-like superfamily protein, putative
Genome locationchr04:5730924..5731832
RNA-Seq ExpressionLsi04G006260
SyntenyLsi04G006260
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR006626 - Parallel beta-helix repeat
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065794.1 exopolygalacturonase-like [Cucumis melo var. makuwa]5.7e-8558.89Show/hide
Query:  AWEKGCGYDGSAVVLIP-QGTFLVFPMKLEGPCHGSIKLQIDGNVLAPHDKLFIKGEYWLALHQVNNLIVDGQGGFDGQGSSAWGYRGHDRPI------T
        AW   C  +G  VVLIP QG FLV P+ L+GPCHG I++Q+DG +LAP DK F  G+YWL++  VNNL +DG G   G GSSAW     +RPI      +
Subjt:  AWEKGCGYDGSAVVLIP-QGTFLVFPMKLEGPCHGSIKLQIDGNVLAPHDKLFIKGEYWLALHQVNNLIVDGQGGFDGQGSSAWGYRGHDRPI------T

Query:  LKFTAINNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIGSL
        +K   IN A+I+NI S DSK FHFAVH S ++TFD+VT++AP +S NTDGIHIS S+ INI +S + TGDDCIS+G GS++INITNV CGPGHGISIGSL
Subjt:  LKFTAINNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIGSL

Query:  GQDPKELNVTKITVRHSIFKNTKNGVRIKSWSTPNPSIVTKVSFIHLQMENVENPIIIDQNYCP-HCSSN
        G+ P E NV ++TVR S F  T NG RIKSWS+   S+V+KV+F++LQM NV+NPIIIDQ+YCP  C  N
Subjt:  GQDPKELNVTKITVRHSIFKNTKNGVRIKSWSTPNPSIVTKVSFIHLQMENVENPIIIDQNYCP-HCSSN

XP_004149596.1 exopolygalacturonase [Cucumis sativus]5.5e-8859.33Show/hide
Query:  AWEKGCGYDGSAVVLIP-QGTFLVFPMKLEGPCHGSIKLQIDGNVLAPHDKLFIKGEYWLALHQVNNLIVDGQGGFDGQGSSAWGYRGHDRPITLKFTAI
        AW   CG +G  VVLIP QG FLV P+ L+GPCHG I++Q+DG +LA  DK F  G++WL++  VNNL +DG G   G G+SAW     +RPI++KF  +
Subjt:  AWEKGCGYDGSAVVLIP-QGTFLVFPMKLEGPCHGSIKLQIDGNVLAPHDKLFIKGEYWLALHQVNNLIVDGQGGFDGQGSSAWGYRGHDRPITLKFTAI

Query:  NNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIGSLGQDPKE
        N A+I+NI S DSKFFHFAVH S ++TFDNVT++AP NS NTDGIHIS S+ INI +S + TGDDCIS+G GS+ INI+NV CGPGHGISIGSLG++P E
Subjt:  NNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIGSLGQDPKE

Query:  LNVTKITVRHSIFKNTKNGVRIKSWSTPNPSIVTKVSFIHLQMENVENPIIIDQNYCP-HCSSNHQHQ
         +V  +TVR S F  T NG RIKSWS+P  S+V+KV+F++LQM NV+NPIIIDQ+YCP  C+ N  ++
Subjt:  LNVTKITVRHSIFKNTKNGVRIKSWSTPNPSIVTKVSFIHLQMENVENPIIIDQNYCP-HCSSNHQHQ

XP_031738767.1 exopolygalacturonase [Cucumis sativus]4.2e-8860.08Show/hide
Query:  AWEKGCGYDGSAVVLIP-QGTFLVFPMKLEGPCHGSIKLQIDGNVLAPHDKLFIKGEYWLALHQVNNLIVDGQGGFDGQGSSAWGYRGHDRPITLKFTAI
        AW + C  +G  +VLIP +G FLV P+ L+GPCHG I++Q+DG +LAP D+ F  G+YWL++ QVNNL +DG G  DG+GS+AW    H+RP++++   I
Subjt:  AWEKGCGYDGSAVVLIP-QGTFLVFPMKLEGPCHGSIKLQIDGNVLAPHDKLFIKGEYWLALHQVNNLIVDGQGGFDGQGSSAWGYRGHDRPITLKFTAI

Query:  NNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIGSLGQDPKE
        NNA I NIKS +SK FHFA+H   ++TFD+VT+IAP NS NTDGIHIS S+ INI +S + TGDDCIS+G GS+ INITN+QCGPGHGISIGSLG+ P E
Subjt:  NNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIGSLGQDPKE

Query:  LNVTKITVRHSIFKNTKNGVRIKSWSTPNPSIVTKVSFIHLQMENVENPIIIDQNYCP
         +V ++TVR S F  T NGVRIK+WS+   S+V+KV+F++LQM NV+NPIIIDQNYCP
Subjt:  LNVTKITVRHSIFKNTKNGVRIKSWSTPNPSIVTKVSFIHLQMENVENPIIIDQNYCP

XP_038904214.1 exopolygalacturonase-like [Benincasa hispida]8.5e-8960.22Show/hide
Query:  AWEKGCGYDGSAVVLIP-QGTFLVFPMKLEGPCHGSIKLQIDGNVLAPHDKLFIKGEYWLALHQVNNLIVDGQGGFDGQGSSAWGYRGHDRPITLKFTAI
        AW + CG  G  VVLIP QG FLV P+ L+GPCHG I +Q+DG +LAP +K F  G+YWL+++QVNNL +DG G  +G+GS+AW Y    RP+++K T I
Subjt:  AWEKGCGYDGSAVVLIP-QGTFLVFPMKLEGPCHGSIKLQIDGNVLAPHDKLFIKGEYWLALHQVNNLIVDGQGGFDGQGSSAWGYRGHDRPITLKFTAI

Query:  NNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIGSLGQDPKE
        N A IRNIKS +SK FHFAVH   N+ FD+VT+IAP +S NTDGIHIS S+ INI +SV+STGDDCIS+G GS+ INITN+QCGPGHGISIGSLG+ P E
Subjt:  NNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIGSLGQDPKE

Query:  LNVTKITVRHSIFKNTKNGVRIKSWSTPNPSIVTKVSFIHLQMENVENPIIIDQNYCP-HCSSNHQHQL
         +V ++T+R SIF  T NGVRIKSWS+   S+V+KVS+ +LQM NV+NPI+IDQ YCP  C  N   ++
Subjt:  LNVTKITVRHSIFKNTKNGVRIKSWSTPNPSIVTKVSFIHLQMENVENPIIIDQNYCP-HCSSNHQHQL

XP_038904218.1 exopolygalacturonase-like [Benincasa hispida]2.6e-8558.71Show/hide
Query:  AWEKGCGYDGSAVVLIPQ-GTFLVFPMKLEGPCHGSIKLQIDGNVLAPHDKLFIKGEYWLALHQVNNLIVDGQGGFDGQGSSAWGYRGHDRPITLKFTAI
        AW + CG +G  VVLIP  G FLV P+ L+GPCHG I++Q DG +LAP D  F  G YWL+++QVNNL +DG G  +G+GS+AW Y+  +RPI++K   I
Subjt:  AWEKGCGYDGSAVVLIPQ-GTFLVFPMKLEGPCHGSIKLQIDGNVLAPHDKLFIKGEYWLALHQVNNLIVDGQGGFDGQGSSAWGYRGHDRPITLKFTAI

Query:  NNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIGSLGQDPKE
        N A IRNIKS +SK FHFA+H   ++TFD+VT+IAP NS NTDGIHIS S+ INI +S++ TGDDCIS+G GS+ INITNV+CGPGHGISIGSLG+ P E
Subjt:  NNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIGSLGQDPKE

Query:  LNVTKITVRHSIFKNTKNGVRIKSWSTPNPSIVTKVSFIHLQMENVENPIIIDQNYCP-HCSSN
         ++ ++TVR S F  T NGVRIKSW +   S+V+KV++++LQM NV+NP+ IDQ YCP  C  N
Subjt:  LNVTKITVRHSIFKNTKNGVRIKSWSTPNPSIVTKVSFIHLQMENVENPIIIDQNYCP-HCSSN

TrEMBL top hitse value%identityAlignment
A0A0A0L7H9 Uncharacterized protein2.1e-8860.08Show/hide
Query:  AWEKGCGYDGSAVVLIP-QGTFLVFPMKLEGPCHGSIKLQIDGNVLAPHDKLFIKGEYWLALHQVNNLIVDGQGGFDGQGSSAWGYRGHDRPITLKFTAI
        AW + C  +G  +VLIP +G FLV P+ L+GPCHG I++Q+DG +LAP D+ F  G+YWL++ QVNNL +DG G  DG+GS+AW    H+RP++++   I
Subjt:  AWEKGCGYDGSAVVLIP-QGTFLVFPMKLEGPCHGSIKLQIDGNVLAPHDKLFIKGEYWLALHQVNNLIVDGQGGFDGQGSSAWGYRGHDRPITLKFTAI

Query:  NNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIGSLGQDPKE
        NNA I NIKS +SK FHFA+H   ++TFD+VT+IAP NS NTDGIHIS S+ INI +S + TGDDCIS+G GS+ INITN+QCGPGHGISIGSLG+ P E
Subjt:  NNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIGSLGQDPKE

Query:  LNVTKITVRHSIFKNTKNGVRIKSWSTPNPSIVTKVSFIHLQMENVENPIIIDQNYCP
         +V ++TVR S F  T NGVRIK+WS+   S+V+KV+F++LQM NV+NPIIIDQNYCP
Subjt:  LNVTKITVRHSIFKNTKNGVRIKSWSTPNPSIVTKVSFIHLQMENVENPIIIDQNYCP

A0A1S4DX91 exopolygalacturonase-like4.7e-8558.58Show/hide
Query:  AWEKGCGYDGSAVVLIPQ-GTFLVFPMKLEGPCHGSIKLQIDGNVLAPHDKLFIKGEYWLALHQVNNLIVDGQGGFDGQGSSAWGYRGHDRPITLKFTAI
        AW + C  +G  VVLIP  G FLV P+ L+GPCHG I +Q+DG +LAP ++    G+YWL++ +VNNL +DG G  +G+GS+AW    H+RPI++K T I
Subjt:  AWEKGCGYDGSAVVLIPQ-GTFLVFPMKLEGPCHGSIKLQIDGNVLAPHDKLFIKGEYWLALHQVNNLIVDGQGGFDGQGSSAWGYRGHDRPITLKFTAI

Query:  NNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIGSLGQDPKE
        NNA I NIKS +SK FHFAVH   ++TFD+VT+IAP NS NTDGIH+S S+ INI +S + TGDDCIS+G GS+ INITNVQCGPGHGISIGSLG+ P E
Subjt:  NNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIGSLGQDPKE

Query:  LNVTKITVRHSIFKNTKNGVRIKSWSTPNPSIVTKVSFIHLQMENVENPIIIDQNYCPH-CSSNHQHQ
         +V ++TVR S F  T NG RIK+WS+   ++V+KV+F++LQM NV+NPIIIDQ+YCPH C  N   Q
Subjt:  LNVTKITVRHSIFKNTKNGVRIKSWSTPNPSIVTKVSFIHLQMENVENPIIIDQNYCPH-CSSNHQHQ

A0A5D3B9J1 Exopolygalacturonase-like6.2e-8558.21Show/hide
Query:  AWEKGCGYDGSAVVLIPQ-GTFLVFPMKLEGPCHGSIKLQIDGNVLAPHDKLFIKGEYWLALHQVNNLIVDGQGGFDGQGSSAWGYRGHDRPITLKFTAI
        AW + C  +G  VVLIP  G FLV P+ L+GPCHG I +Q+DG +LAP ++    G+YWL++ +VNNL +DG G  +G+GS+AW    H+RPI++K T I
Subjt:  AWEKGCGYDGSAVVLIPQ-GTFLVFPMKLEGPCHGSIKLQIDGNVLAPHDKLFIKGEYWLALHQVNNLIVDGQGGFDGQGSSAWGYRGHDRPITLKFTAI

Query:  NNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIGSLGQDPKE
        NNA I NIKS +SK FHFAVH   ++TFD+VT+IAP NS NTDGIH+S S+ INI +S + TGDDCIS+G GS+ INITNVQCGPGHGISIGSLG+ P E
Subjt:  NNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIGSLGQDPKE

Query:  LNVTKITVRHSIFKNTKNGVRIKSWSTPNPSIVTKVSFIHLQMENVENPIIIDQNYCPH-CSSNHQHQ
         +V ++TVR S F  T NG RIK+WS+   ++V+K++F++LQM NV+NPIIIDQ+YCPH C  N   Q
Subjt:  LNVTKITVRHSIFKNTKNGVRIKSWSTPNPSIVTKVSFIHLQMENVENPIIIDQNYCPH-CSSNHQHQ

A0A5D3BB58 Exopolygalacturonase-like2.8e-8558.89Show/hide
Query:  AWEKGCGYDGSAVVLIP-QGTFLVFPMKLEGPCHGSIKLQIDGNVLAPHDKLFIKGEYWLALHQVNNLIVDGQGGFDGQGSSAWGYRGHDRPI------T
        AW   C  +G  VVLIP QG FLV P+ L+GPCHG I++Q+DG +LAP DK F  G+YWL++  VNNL +DG G   G GSSAW     +RPI      +
Subjt:  AWEKGCGYDGSAVVLIP-QGTFLVFPMKLEGPCHGSIKLQIDGNVLAPHDKLFIKGEYWLALHQVNNLIVDGQGGFDGQGSSAWGYRGHDRPI------T

Query:  LKFTAINNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIGSL
        +K   IN A+I+NI S DSK FHFAVH S ++TFD+VT++AP +S NTDGIHIS S+ INI +S + TGDDCIS+G GS++INITNV CGPGHGISIGSL
Subjt:  LKFTAINNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIGSL

Query:  GQDPKELNVTKITVRHSIFKNTKNGVRIKSWSTPNPSIVTKVSFIHLQMENVENPIIIDQNYCP-HCSSN
        G+ P E NV ++TVR S F  T NG RIKSWS+   S+V+KV+F++LQM NV+NPIIIDQ+YCP  C  N
Subjt:  GQDPKELNVTKITVRHSIFKNTKNGVRIKSWSTPNPSIVTKVSFIHLQMENVENPIIIDQNYCP-HCSSN

A0A6J1F153 exopolygalacturonase-like1.7e-8255.73Show/hide
Query:  AWEKGCGYDGSAVVLIPQGTFLVFPMKLEGPCHGSIKLQIDGNVLAPHDKLFIKGEYWLALHQVNNLIVDGQGGFDGQGSSAWGYRGHDRPITLKFTAIN
        AW + CG++G  VVL+P G FL+ P+ LEGPC  SI L I G +LAP  K F  G YWL++ +V+NL VDG G  +G GSSAW     +RP+++K +++N
Subjt:  AWEKGCGYDGSAVVLIPQGTFLVFPMKLEGPCHGSIKLQIDGNVLAPHDKLFIKGEYWLALHQVNNLIVDGQGGFDGQGSSAWGYRGHDRPITLKFTAIN

Query:  NATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIGSLGQDPKEL
         A I  I S +SKFFHF VH   ++TFD+VT+IAP +S NTDGIH+SKS+ INI +SV+ TGDDCIS+G GS+ INIT++QCGPGHGISIGSLG+ P E 
Subjt:  NATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIGSLGQDPKEL

Query:  NVTKITVRHSIFKNTKNGVRIKSWSTPNPSIVTKVSFIHLQMENVENPIIIDQNYCPHCSSN
        +V+++T+R S F  T NGVRIK+WS+   S V+K++F++L+M++V+NPIIIDQ YCP C  +
Subjt:  NVTKITVRHSIFKNTKNGVRIKSWSTPNPSIVTKVSFIHLQMENVENPIIIDQNYCPHCSSN

SwissProt top hitse value%identityAlignment
P24548 Exopolygalacturonase (Fragment)2.3e-6043.23Show/hide
Query:  AWEKGCGYDGSAVVLIPQGTFLVFPMKLEGPCHGSIKLQIDGNVLAPHDKLFIKGEYWLALHQVNNLIVDGQGGFDGQGSSAW--------GYRGHDRPI
        AW++ C     + +L+P+G F V  + LEGPC  SI LQ+ G + AP D   IKG  W+ L++++ L + G G FDGQG SAW        G       +
Subjt:  AWEKGCGYDGSAVVLIPQGTFLVFPMKLEGPCHGSIKLQIDGNVLAPHDKLFIKGEYWLALHQVNNLIVDGQGGFDGQGSSAW--------GYRGHDRPI

Query:  TLKFTAINNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIGS
         L+  A+ N+ +R++ ++DSK FH  V   +N+TF+   + A + S NTDGIHI +S  +NI N+ + TGDDCIS+G GS+NINITN+ CGPGHGIS+GS
Subjt:  TLKFTAINNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIGS

Query:  LGQDPKELNVTKITVRHSIFKNTKNGVRIKSWSTPNPSIVTKVSFIHLQMENVENPIIIDQNYCPH
        LG+   E +V  I V++     ++NGVRIK+W    P   +++ F  + M +V  PI+IDQ YCP+
Subjt:  LGQDPKELNVTKITVRHSIFKNTKNGVRIKSWSTPNPSIVTKVSFIHLQMENVENPIIIDQNYCPH

P35338 Exopolygalacturonase1.1e-5741.39Show/hide
Query:  AWEKGCGYDGSAVVLIPQGTFLVFPMKLEGPCHGSIKLQIDGNVLAPHD-KLFIKGEYWLALHQVNNLIVDGQGGFDGQGSSAWG-------YRGHDRPI
        AW   CG  G   +LIP+G FLV  +   GPC G + +Q+DGN+LA  D   + +   W+ + +V+NL++ G+G  DGQG + W        Y     P 
Subjt:  AWEKGCGYDGSAVVLIPQGTFLVFPMKLEGPCHGSIKLQIDGNVLAPHD-KLFIKGEYWLALHQVNNLIVDGQGGFDGQGSSAWG-------YRGHDRPI

Query:  TLKFTAINNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIGS
        +L    +NN  +  +  ++SKFFH  +++ +NM   +VT+ AP +S NTDGIH+  S+ I I N+V+  GDDCIS+G G+  +NIT V CGPGHGISIGS
Subjt:  TLKFTAINNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIGS

Query:  LGQDPKELNVTKITVRHSIFKNTKNGVRIKSW-STPNPSIVTKVSFIHLQMENVENPIIIDQNYCPH--CSSN
        LG+   E +VT I V+    K T  GVRIK++    +   V+K+ + +++ME+  NPI ID  YCP+  C++N
Subjt:  LGQDPKELNVTKITVRHSIFKNTKNGVRIKSW-STPNPSIVTKVSFIHLQMENVENPIIIDQNYCPH--CSSN

Q05967 Polygalacturonase9.3e-6242.86Show/hide
Query:  AWEKGCGYDGSAVVLIPQGTFLVFPMKLEGPCHGSIKLQIDGNVLAPHDKLFIKGEYWLALHQVNNLIVDGQGGFDGQGSSAWGYRGHDR----PITLKF
        A+++ C     + ++IP+GTF +  +KLEGPC   ++LQI   + AP D   +K   WL +++++   + G G  DGQ ++AW  +   +    P  L F
Subjt:  AWEKGCGYDGSAVVLIPQGTFLVFPMKLEGPCHGSIKLQIDGNVLAPHDKLFIKGEYWLALHQVNNLIVDGQGGFDGQGSSAWGYRGHDR----PITLKF

Query:  TAINNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIGSLGQD
         ++ N+TI++I ++DSK FH  V++ +N+TF    + AP NS NTDGIH+S+S+++NI +S  STGDDCIS+G  ++ + IT V CGPGHGIS+GSLG +
Subjt:  TAINNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIGSLGQD

Query:  PKELNVTKITVRHSIFKNTKNGVRIKSWSTPNPSIVTKVSFIHLQMENVENPIIIDQNYCPHCSSN
        P E  V  + VR+  F NT NGVRIK+W   +P +V  V F  + ++NV NP++IDQ YCP    N
Subjt:  PKELNVTKITVRHSIFKNTKNGVRIKSWSTPNPSIVTKVSFIHLQMENVENPIIIDQNYCPHCSSN

Q40312 Polygalacturonase2.5e-5941.84Show/hide
Query:  AWEKGCGYDGSAVVLIPQGTFLVFPMKLEGPCHGSIKLQIDGNVLAPHDKLFIKG-EYWLALHQVNNLIVDGQGGFDGQG---------SSAWGYRGHDR
        AW + C    +A ++IP GT+ +  ++L+GPC   I+LQ+DG + AP D   IKG E W     +++L + G+G FDGQG         +SAW  +  + 
Subjt:  AWEKGCGYDGSAVVLIPQGTFLVFPMKLEGPCHGSIKLQIDGNVLAPHDKLFIKG-EYWLALHQVNNLIVDGQGGFDGQG---------SSAWGYRGHDR

Query:  PITLK--FTAINNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGI
         + +   F  +NN+ +R + S DSK FH  V   +N+TFD  T+ AP +S NTDGIH+ KST++ I N+ + TGDDC+S+G GS+ I +  V CGPGHG+
Subjt:  PITLK--FTAINNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGI

Query:  SIGSLGQDPKELNVTKITVRHSIFKNTKNGVRIKSW-STPNPSIVTKVSFIHLQMENVENPIIIDQNYCP--HCSSNHQHQL
        S+GSLG+   E NV  ITV++     T NGVRIK+W   P    V+ + F  + M NV+NP+IIDQ Y P   CS  +  ++
Subjt:  SIGSLGQDPKELNVTKITVRHSIFKNTKNGVRIKSW-STPNPSIVTKVSFIHLQMENVENPIIIDQNYCP--HCSSNHQHQL

Q6H9K0 Exopolygalacturonase (Fragment)3.4e-6444.85Show/hide
Query:  AWEKGCGYDGSAVVLIPQGTFLVFPMKLEGPCHGS-IKLQIDGNVLAPHDKLFIKGEYWLALHQVNNLIVDGQGGFDGQGSSAWGYRGHDR-------PI
        AW+  C   G + VLIP+G + +  + ++GPC GS I  QIDG V AP D    K + W++ ++++ L V G G  DGQG +AW     D+        +
Subjt:  AWEKGCGYDGSAVVLIPQGTFLVFPMKLEGPCHGS-IKLQIDGNVLAPHDKLFIKGEYWLALHQVNNLIVDGQGGFDGQGSSAWGYRGHDR-------PI

Query:  TLKFTAINNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIGS
         L+F  + +A +R+I S++SK FH  V E E++TF +VT+ AP  S NTDGIH+  S  + I N+ ++TGDDCIS+G GSQN+ IT V CGPGHGISIGS
Subjt:  TLKFTAINNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIGS

Query:  LGQDPKELNVTKITVRHSIFKNTKNGVRIKSWSTPNPSIVTKVSFIHLQMENVENPIIIDQNYCPHCSSNHQ
        LG+   E  V  ITV+   F  T NGVR+K+W    P   T ++F  L M NV+NP+I+DQ YCP+   + Q
Subjt:  LGQDPKELNVTKITVRHSIFKNTKNGVRIKSWSTPNPSIVTKVSFIHLQMENVENPIIIDQNYCPHCSSNHQ

Arabidopsis top hitse value%identityAlignment
AT1G05660.1 Pectin lyase-like superfamily protein4.9e-5842.21Show/hide
Query:  AWEKGCGYDGSAVVLIPQGTFLVFPMKLEGPCHGSIKLQIDGNVLAPHD-KLFIKGEYWLALHQVNNLIVDGQGGFDGQGSSAWGYR--GHDRP---ITL
        AW+  C    SA V++P+GTFL+  +   GPC   I  Q+ G V+AP D + F    +W+  ++VN   + G G FD + +  W  R  G + P    ++
Subjt:  AWEKGCGYDGSAVVLIPQGTFLVFPMKLEGPCHGSIKLQIDGNVLAPHD-KLFIKGEYWLALHQVNNLIVDGQGGFDGQGSSAWGYR--GHDRP---ITL

Query:  KFTAINNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIGSLG
         F +  +  I  +KS++S+  H  ++   N+   NV L+AP NS NTDG H+  ST +    S + TGDDC+++G G++N+ IT + CGPGHG+SIGSL 
Subjt:  KFTAINNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIGSLG

Query:  QDPKELNVTKITVRHSIFKNTKNGVRIKSWSTPNPSIVTKVSFIHLQMENVENPIIIDQNYCP
        ++ KE  V  +TV  S+F  ++NGVRIKSW+ P+   V  V F  L M+NVENPIIIDQNYCP
Subjt:  QDPKELNVTKITVRHSIFKNTKNGVRIKSWSTPNPSIVTKVSFIHLQMENVENPIIIDQNYCP

AT1G17150.1 Pectin lyase-like superfamily protein9.8e-5943.54Show/hide
Query:  AWEKGCGYDGSAVVLIPQGTFLVFPMKLEGPCHGSIKLQIDGNVLAPHDKLFIKGEYWLALHQVNNLIVDGQGGFDGQGSSAWG----YRGHDRP---IT
        AW+  C ++G + + IP GTF +  +   GPC G I   IDG +LAP +   IK E W+    +N L V G G  DGQG  +W      + ++ P   I 
Subjt:  AWEKGCGYDGSAVVLIPQGTFLVFPMKLEGPCHGSIKLQIDGNVLAPHDKLFIKGEYWLALHQVNNLIVDGQGGFDGQGSSAWG----YRGHDRP---IT

Query:  LKFTAINNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIGSL
        + F  + N+++  I S++SK  HF     ++ +   V +IAP NS NTDGI I+ S+N+ I N+ +STGDDCI+M  G+ N +I NV+CGPGHGISIGSL
Subjt:  LKFTAINNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIGSL

Query:  GQDPKELNVTKITVRHSIFKNTKNGVRIKSWSTPNPSI-VTKVSFIHLQMENVENPIIIDQNYCPH--CSS
        G++  E NV  + VR+S+F  T NG+RIK+W +   +I +  + + +LQM NVENPI IDQ YCP+  CS+
Subjt:  GQDPKELNVTKITVRHSIFKNTKNGVRIKSWSTPNPSI-VTKVSFIHLQMENVENPIIIDQNYCPH--CSS

AT1G65570.1 Pectin lyase-like superfamily protein4.9e-5842.96Show/hide
Query:  AWEKGCGYDGSAVVLIPQGTFLVF-PMKLEGPCHGS--IKLQIDGNVLAPHD-KLFIKGEYWLALHQVNNLIVDGQGGFDGQGSSAW-----GYRGHDRP
        AW+  CG + S V+ +P+G +LV   ++ EG    S  I L+IDG ++ P D  L  K E W +   V+N+ V G G FD +GS+ W     GY   +  
Subjt:  AWEKGCGYDGSAVVLIPQGTFLVF-PMKLEGPCHGS--IKLQIDGNVLAPHD-KLFIKGEYWLALHQVNNLIVDGQGGFDGQGSSAW-----GYRGHDRP

Query:  ITLKFTAINNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIG
         TL+F   NN  I+ + S++S+ FH A++   N+  ++V +IAP  S NTDGIHI  ST+I + N+ + TGDDCIS+G G++N+ +  + CGPGHGISIG
Subjt:  ITLKFTAINNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIG

Query:  SLGQDPKELNVTKITVRHSIFKNTKNGVRIKSWSTPNPSIVTKVSFIHLQMENVENPIIIDQNYCPHCSS
        SL +  +E  V  +TV++++F  T NG+RIKSW   +   V +V F+   M NV  PI+IDQNYCP  SS
Subjt:  SLGQDPKELNVTKITVRHSIFKNTKNGVRIKSWSTPNPSIVTKVSFIHLQMENVENPIIIDQNYCPHCSS

AT3G07850.1 Pectin lyase-like superfamily protein6.4e-5838.85Show/hide
Query:  AWEKGCGYDGSAVVLIPQGTFLVFPMKLEGPCHGSIKLQIDGNVLAPHDKLFIKGEY-WLALHQVNNLIVDGQGG-FDGQGSSAWGY-------RGHDRP
        AW++ C     + + +P+G ++V  ++ +GPC G + L+++GN  AP      K    W+    + +  ++G    FDGQGS AW         + +  P
Subjt:  AWEKGCGYDGSAVVLIPQGTFLVFPMKLEGPCHGSIKLQIDGNVLAPHDKLFIKGEY-WLALHQVNNLIVDGQGG-FDGQGSSAWGY-------RGHDRP

Query:  ITLKFTAINNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIG
        I ++FT + N+ I +I S +SK FH  +   +N+T  ++ + AP  S NTDGIHI +S  +N+  + + TGDDC+S+G G++N+ + NV+CGPGHGISIG
Subjt:  ITLKFTAINNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIG

Query:  SLGQDPKELNVTKITVRHSIFKNTKNGVRIKSWSTPNPSIVTKVSFIHLQMENVENPIIIDQNYCP--HCSSNHQHQL
        SLG+ P E  V  +TVR  + KNT NGVRIK+W    P I + + F  + M+NV  P++IDQ YCP  HC +    Q+
Subjt:  SLGQDPKELNVTKITVRHSIFKNTKNGVRIKSWSTPNPSIVTKVSFIHLQMENVENPIIIDQNYCP--HCSSNHQHQL

AT3G14040.1 Pectin lyase-like superfamily protein6.4e-5839.71Show/hide
Query:  AWEKGCGYDGSAVVLIPQGTFLVFPMKLEGPCHGSIKLQIDGNVLAPHDKLFIKGEY-WLALHQVNNLIVDGQGG-FDGQGSSAWGY-------RGHDRP
        AW++ C     + + +P+G +LV  ++ +GPC G + L+++GN  AP      K    W+    + +  ++G    FDGQGS AW         + +  P
Subjt:  AWEKGCGYDGSAVVLIPQGTFLVFPMKLEGPCHGSIKLQIDGNVLAPHDKLFIKGEY-WLALHQVNNLIVDGQGG-FDGQGSSAWGY-------RGHDRP

Query:  ITLKFTAINNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIG
        I ++FT + N+ I +I S +SK FH  +   +N+T  ++ + AP  S NTDGIHI +S  +N+  + + TGDDC+S+G G++N+ + NV+CGPGHGISIG
Subjt:  ITLKFTAINNATIRNIKSVDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIG

Query:  SLGQDPKELNVTKITVRHSIFKNTKNGVRIKSWSTPNPSIVTKVSFIHLQMENVENPIIIDQNYCP--HCSS
        SLG+ P E  V  +TVR  + KNT NGVRIK+W    P I + + F  + M+NV  P++IDQ YCP  HC +
Subjt:  SLGQDPKELNVTKITVRHSIFKNTKNGVRIKSWSTPNPSIVTKVSFIHLQMENVENPIIIDQNYCP--HCSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATGGGAAAAAGGTTGTGGATATGATGGTTCTGCAGTGGTTTTAATACCACAAGGCACCTTCTTGGTTTTCCCAATGAAACTTGAAGGTCCTTGCCATGGCTCAAT
TAAACTACAGATCGACGGCAATGTCTTGGCTCCTCACGATAAACTTTTCATCAAGGGTGAATACTGGCTCGCCCTCCATCAGGTCAACAATTTGATCGTCGACGGTCAAG
GGGGGTTCGACGGCCAAGGCTCTTCCGCTTGGGGTTATAGAGGTCACGACCGTCCAATCACATTAAAATTTACTGCAATCAACAATGCGACGATAAGGAACATCAAGTCT
GTGGACAGTAAATTCTTCCATTTTGCAGTGCACGAAAGCGAAAACATGACGTTTGATAATGTCACACTCATAGCTCCAAAAAACAGTTCCAACACGGATGGAATCCACAT
CTCCAAATCAACTAACATCAACATCTTCAACTCAGTGATGAGCACAGGAGACGATTGCATCTCCATGGGTCATGGAAGCCAAAACATCAATATAACCAATGTTCAATGTG
GTCCAGGCCACGGAATCAGCATCGGAAGCCTTGGCCAAGATCCGAAAGAATTAAATGTGACCAAAATCACCGTAAGACACTCCATATTCAAAAATACCAAAAATGGTGTG
AGGATCAAATCATGGTCCACCCCAAATCCAAGTATAGTTACCAAAGTTTCATTCATCCATCTTCAAATGGAGAATGTCGAAAATCCTATCATCATCGATCAAAACTATTG
CCCTCATTGCTCTAGCAATCATCAACATCAACTGGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCATGGGAAAAAGGTTGTGGATATGATGGTTCTGCAGTGGTTTTAATACCACAAGGCACCTTCTTGGTTTTCCCAATGAAACTTGAAGGTCCTTGCCATGGCTCAAT
TAAACTACAGATCGACGGCAATGTCTTGGCTCCTCACGATAAACTTTTCATCAAGGGTGAATACTGGCTCGCCCTCCATCAGGTCAACAATTTGATCGTCGACGGTCAAG
GGGGGTTCGACGGCCAAGGCTCTTCCGCTTGGGGTTATAGAGGTCACGACCGTCCAATCACATTAAAATTTACTGCAATCAACAATGCGACGATAAGGAACATCAAGTCT
GTGGACAGTAAATTCTTCCATTTTGCAGTGCACGAAAGCGAAAACATGACGTTTGATAATGTCACACTCATAGCTCCAAAAAACAGTTCCAACACGGATGGAATCCACAT
CTCCAAATCAACTAACATCAACATCTTCAACTCAGTGATGAGCACAGGAGACGATTGCATCTCCATGGGTCATGGAAGCCAAAACATCAATATAACCAATGTTCAATGTG
GTCCAGGCCACGGAATCAGCATCGGAAGCCTTGGCCAAGATCCGAAAGAATTAAATGTGACCAAAATCACCGTAAGACACTCCATATTCAAAAATACCAAAAATGGTGTG
AGGATCAAATCATGGTCCACCCCAAATCCAAGTATAGTTACCAAAGTTTCATTCATCCATCTTCAAATGGAGAATGTCGAAAATCCTATCATCATCGATCAAAACTATTG
CCCTCATTGCTCTAGCAATCATCAACATCAACTGGTATAA
Protein sequenceShow/hide protein sequence
MAWEKGCGYDGSAVVLIPQGTFLVFPMKLEGPCHGSIKLQIDGNVLAPHDKLFIKGEYWLALHQVNNLIVDGQGGFDGQGSSAWGYRGHDRPITLKFTAINNATIRNIKS
VDSKFFHFAVHESENMTFDNVTLIAPKNSSNTDGIHISKSTNINIFNSVMSTGDDCISMGHGSQNINITNVQCGPGHGISIGSLGQDPKELNVTKITVRHSIFKNTKNGV
RIKSWSTPNPSIVTKVSFIHLQMENVENPIIIDQNYCPHCSSNHQHQLV