CuGenDBv2

Gene ID	Lsi04G006380
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Protein GLE1
Genome location	chr04:5852418..5859670
RNA-Seq Expression	Lsi04G006380
Synteny	Lsi04G006380
Gene Ontology terms	GO:0016973 - poly(A)+ mRNA export from nucleus (biological process) GO:0005643 - nuclear pore (cellular component) GO:0005488 - binding (molecular function)
InterPro domains	IPR012476 - GLE1-like IPR038506 - GLE1-like superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0034248.1 protein GLE1 [Cucumis melo var. makuwa]

3.9e-149

52.92

Show/hide

Query:  LTRSSKVIEAFQSLLMETMRPVKLILRGPSRIRQVTIDPQPDFSFDDLQVELHSLEEKLRTSSMPFEKTYSRDFPVIRTMKRSSKPFVMGVYEDELQGIF
        L  S  VIEA QSLL++TM PVKL LR PS+I QV +DP PDFSFDDL++ELHSLEEKL  S+MPF+KT SRDFPV +T+KRSSKPF+MGVYEDEL+ IF
Subjt:  LTRSSKVIEAFQSLLMETMRPVKLILRGPSRIRQVTIDPQPDFSFDDLQVELHSLEEKLRTSSMPFEKTYSRDFPVIRTMKRSSKPFVMGVYEDELQGIF

Query:  SDGEVVRHQSSNAMHLNCDGIFLSDREDSNHESTLQVLVDLKEDVDLVESSLALQTYDRFLNMKEEIRNQLGRLETDLTTLNENSRAAISRIEKYYEARR
        SD EVV   SSNA   NCDGIFLSD EDS++ESTL+    LKED+DLVESSLA  T+D  LN+KEEIRNQLGRLETDLTTLNE S AAIS+IEKYYEARR
Subjt:  SDGEVVRHQSSNAMHLNCDGIFLSDREDSNHESTLQVLVDLKEDVDLVESSLALQTYDRFLNMKEEIRNQLGRLETDLTTLNENSRAAISRIEKYYEARR

Query:  EADRRFD--------------------------------------------------------------------------AAIEAERIGMK-----KAA
        EADRR D                                                                          AAIEAER   K     +AA
Subjt:  EADRRFD--------------------------------------------------------------------------AAIEAERIGMK-----KAA

Query:  ENLKKIDVVKAQETIVGAQTTKP----------------------------------------------------------DFSIHEKHIARTIKQIGGT
        ENLKK+D V+ QET+VG+  TKP                                                          DFS +E+HIAR IKQIGGT
Subjt:  ENLKKIDVVKAQETIVGAQTTKP----------------------------------------------------------DFSIHEKHIARTIKQIGGT

Query:  KENVRKKTSELLKSFMDPRCPQTISTAAFAEKVVLLSQIEYTNVPFAFSHIIVLVTSQVPSAMVLFLAELHRACIYTVPKHIEYSEAAFESKDSYYKTIG
        KENVR KTSE+LK FM P CPQTIS AAFA+K+V  SQ E  +  FA SH+IVLVTSQ PSA+VL LAELHRACIYTVPKHI+YS AA+ESK+SYYKTIG
Subjt:  KENVRKKTSELLKSFMDPRCPQTISTAAFAEKVVLLSQIEYTNVPFAFSHIIVLVTSQVPSAMVLFLAELHRACIYTVPKHIEYSEAAFESKDSYYKTIG

Query:  FREDNGKMECVENYLMRLEAYMKLYGALIQ-----------------------------------------VAGFALFSKYKSQFRKLLNIISDNFLSVL
        FRE +GKME VE+YL RLEAY+KLY ALIQ                                         VAGFA++ KYKSQF KLLNIISDNFLS +
Subjt:  FREDNGKMECVENYLMRLEAYMKLYGALIQ-----------------------------------------VAGFALFSKYKSQFRKLLNIISDNFLSVL

Query:  RGKENIELNGIIVKIEFYLENQKFLQEPEGRIL
        RGK N  LN II+ IE YLE++KFL+EPEG+ L
Subjt:  RGKENIELNGIIVKIEFYLENQKFLQEPEGRIL

KAG6601557.1 Protein GLE1, partial [Cucurbita argyrosperma subsp. sororia]

5.1e-149

54.19

Show/hide

Query:  QSLLMETMRPVKLILRGPSRIRQVTIDPQPDFSFDDLQVELHSLEEKLRTSSMPFEKTYS--------RDFPVIRTMKRSSKPFVMGVYEDELQGIFSDG
        +SLL+E M PVKL LR PSR+ QVT DPQPDFSFDDL+VEL+SLEEKL+TS+ PF KT S        RDFP+I+T KRSSKPFVMGVYEDELQ IF+DG
Subjt:  QSLLMETMRPVKLILRGPSRIRQVTIDPQPDFSFDDLQVELHSLEEKLRTSSMPFEKTYS--------RDFPVIRTMKRSSKPFVMGVYEDELQGIFSDG

Query:  EVVRHQSSNAMHLNCDGIFLSDREDSNHESTLQVLVDLKEDVDLVESSLALQTYDRFLNMKEEIRNQLGRLETDLTTLNENSRAAISRIEKYYEARREAD
        EVV  Q SNA   NCDG FLSD EDS++ESTL+    L EDVDLVESSLA  T D  LN KEEIRNQLGRLET+LTTLNE S AA S+IEKYYEARREAD
Subjt:  EVVRHQSSNAMHLNCDGIFLSDREDSNHESTLQVLVDLKEDVDLVESSLALQTYDRFLNMKEEIRNQLGRLETDLTTLNENSRAAISRIEKYYEARREAD

Query:  RRFD--------------------------------------------------------------------------AAIEAERIGMK-----KAAENL
        RR D                                                                          AAIEAE   MK     +AAENL
Subjt:  RRFD--------------------------------------------------------------------------AAIEAERIGMK-----KAAENL

Query:  KKIDVVKAQETIVGAQTTKP----------------------------------------------------------DFSIHEKHIARTIKQIGGTKEN
        KK+D V+AQETIVGA TTKP                                                          DFS HE+HIAR I+QI GTKEN
Subjt:  KKIDVVKAQETIVGAQTTKP----------------------------------------------------------DFSIHEKHIARTIKQIGGTKEN

Query:  VRKKTSELLKSFMDPRCPQTISTAAFAEKVVLLSQIEYT-NVPFAFSHIIVLVTSQVPSAMVLFLAELHRACIYTVPKHIEYSEAAFESKDSYYKTIGFR
        V  KTS+LLK FMDP CPQTIS AAFA+KVV  SQ E + N  FA SH+IVLVTSQVPSAMVL LAE HRACIYTVPKH+ YSEAAFESK+SYYKT+GFR
Subjt:  VRKKTSELLKSFMDPRCPQTISTAAFAEKVVLLSQIEYT-NVPFAFSHIIVLVTSQVPSAMVLFLAELHRACIYTVPKHIEYSEAAFESKDSYYKTIGFR

Query:  ED-NGKMECVENYLMRLEAYMKLYGALI-----------------------------------------QVAGFALFSKYKSQFRKLLNIISDNFLSVLR
        ED +GKME V++YL RLEAYMKLYGAL+                                         QVAGFALF KYKSQFRKLLNIISDNFLS LR
Subjt:  ED-NGKMECVENYLMRLEAYMKLYGALI-----------------------------------------QVAGFALFSKYKSQFRKLLNIISDNFLSVLR

Query:  GKENIELNGIIVKIEFYLENQKFLQEPEGRILQ
        GKEN  L  IIV+IE YLE++KFLQEPEGR L+
Subjt:  GKENIELNGIIVKIEFYLENQKFLQEPEGRILQ

XP_022957181.1 protein GLE1 isoform X1 [Cucurbita moschata]

1.5e-148

54.85

Show/hide

Query:  MRPVKLILRGPSRIRQVTIDPQPDFSFDDLQVELHSLEEKLRTSSMPFEKTYSRDFPVIRTMKRSSKPFVMGVYEDELQGIFSDGEVVRHQSSNAMHLNC
        M PVKL LR PSR+ QVT DPQPDFSFDDL+VEL+SLEEKL+TS+ PF KT SRDFP+I+T KRSSKPFVMGVYEDELQ IF+DGEVV  Q SNA   NC
Subjt:  MRPVKLILRGPSRIRQVTIDPQPDFSFDDLQVELHSLEEKLRTSSMPFEKTYSRDFPVIRTMKRSSKPFVMGVYEDELQGIFSDGEVVRHQSSNAMHLNC

Query:  DGIFLSDREDSNHESTLQVLVDLKEDVDLVESSLALQTYDRFLNMKEEIRNQLGRLETDLTTLNENSRAAISRIEKYYEARREADRRFD-----------
        DG FLSD EDS++ESTL     L EDVDLVESSLA  T D  LN KEEIRNQLGRLET+LTTLNE S AA S+IEKYYEARREADRR D           
Subjt:  DGIFLSDREDSNHESTLQVLVDLKEDVDLVESSLALQTYDRFLNMKEEIRNQLGRLETDLTTLNENSRAAISRIEKYYEARREADRRFD-----------

Query:  ---------------------------------------------------------------AAIEAERIGMK-----KAAENLKKIDVVKAQETIVGA
                                                                       AAIEAE   MK     +AAENLKK+D V+AQETIVGA
Subjt:  ---------------------------------------------------------------AAIEAERIGMK-----KAAENLKKIDVVKAQETIVGA

Query:  QTTKP----------------------------------------------------------DFSIHEKHIARTIKQIGGTKENVRKKTSELLKSFMDP
         TTKP                                                          DFS HE+HIAR I+QI GTKENV  KTS+LLK FMDP
Subjt:  QTTKP----------------------------------------------------------DFSIHEKHIARTIKQIGGTKENVRKKTSELLKSFMDP

Query:  RCPQTISTAAFAEKVVLLSQIEYT-NVPFAFSHIIVLVTSQVPSAMVLFLAELHRACIYTVPKHIEYSEAAFESKDSYYKTIGFRED-NGKMECVENYLM
         CPQTIS AAFA+KVV  SQ E + N  FA SH+IVLVTSQVPSAMVL LAE HRACIYTVPKH+ YSEAAFESK+SYYKT+GFRED +GKME V++YL 
Subjt:  RCPQTISTAAFAEKVVLLSQIEYT-NVPFAFSHIIVLVTSQVPSAMVLFLAELHRACIYTVPKHIEYSEAAFESKDSYYKTIGFRED-NGKMECVENYLM

Query:  RLEAYMKLYGALI-----------------------------------------QVAGFALFSKYKSQFRKLLNIISDNFLSVLRGKENIELNGIIVKIE
        RLEAYMKLYGAL+                                         QVAGFALF KYKSQFRKLLNIISDNFLS LRGKEN  L  IIV+IE
Subjt:  RLEAYMKLYGALI-----------------------------------------QVAGFALFSKYKSQFRKLLNIISDNFLSVLRGKENIELNGIIVKIE

Query:  FYLENQKFLQEPEGRILQ
         YLE++KFLQEPEGR L+
Subjt:  FYLENQKFLQEPEGRILQ

XP_023544608.1 protein GLE1 isoform X1 [Cucurbita pepo subsp. pepo]

5.1e-149

54.85

Show/hide

Query:  MRPVKLILRGPSRIRQVTIDPQPDFSFDDLQVELHSLEEKLRTSSMPFEKTYSRDFPVIRTMKRSSKPFVMGVYEDELQGIFSDGEVVRHQSSNAMHLNC
        M PVKL LR PSR+ QVT DPQPDFSFDDL+VEL+SLEEKL+TS+ PF KT SRDFP+I+T KRSSKPFVMGVYEDELQ IF+DGEVV  Q SNA   NC
Subjt:  MRPVKLILRGPSRIRQVTIDPQPDFSFDDLQVELHSLEEKLRTSSMPFEKTYSRDFPVIRTMKRSSKPFVMGVYEDELQGIFSDGEVVRHQSSNAMHLNC

Query:  DGIFLSDREDSNHESTLQVLVDLKEDVDLVESSLALQTYDRFLNMKEEIRNQLGRLETDLTTLNENSRAAISRIEKYYEARREADRRFD-----------
        DG FLSD EDS++ESTL+    L EDVDLVESSLA  T D  LN KEEIRNQLGRLET+LTTLNE S AA S+IEKYYEARREADRR D           
Subjt:  DGIFLSDREDSNHESTLQVLVDLKEDVDLVESSLALQTYDRFLNMKEEIRNQLGRLETDLTTLNENSRAAISRIEKYYEARREADRRFD-----------

Query:  ---------------------------------------------------------------AAIEAERIGMK-----KAAENLKKIDVVKAQETIVGA
                                                                       AAIEAE   MK     +AAENLKK+D V+AQETIVGA
Subjt:  ---------------------------------------------------------------AAIEAERIGMK-----KAAENLKKIDVVKAQETIVGA

Query:  QTTKP----------------------------------------------------------DFSIHEKHIARTIKQIGGTKENVRKKTSELLKSFMDP
         TTKP                                                          DFS HE+HIAR I+QI GTKENV  KTS+LLK FMDP
Subjt:  QTTKP----------------------------------------------------------DFSIHEKHIARTIKQIGGTKENVRKKTSELLKSFMDP

Query:  RCPQTISTAAFAEKVVLLSQIEYT-NVPFAFSHIIVLVTSQVPSAMVLFLAELHRACIYTVPKHIEYSEAAFESKDSYYKTIGFRED-NGKMECVENYLM
         CPQTIS AAFA+KVV  SQ E + N  FA SH+IVLVTSQVPSAMVL LAE HRACIYTVPKH+ YSEAAFESK+SYYKT+GFRED +GKME V++YL 
Subjt:  RCPQTISTAAFAEKVVLLSQIEYT-NVPFAFSHIIVLVTSQVPSAMVLFLAELHRACIYTVPKHIEYSEAAFESKDSYYKTIGFRED-NGKMECVENYLM

Query:  RLEAYMKLYGALI-----------------------------------------QVAGFALFSKYKSQFRKLLNIISDNFLSVLRGKENIELNGIIVKIE
        RLEAYMKLYGAL+                                         QVAGFALF KYKSQFRKLLNIISDNFLS LRGKEN  L  IIV+IE
Subjt:  RLEAYMKLYGALI-----------------------------------------QVAGFALFSKYKSQFRKLLNIISDNFLSVLRGKENIELNGIIVKIE

Query:  FYLENQKFLQEPEGRILQ
         YLE++KFLQEPEGR L+
Subjt:  FYLENQKFLQEPEGRILQ

XP_038892151.1 protein GLE1 [Benincasa hispida]

1.9e-151

54.96

Show/hide

Query:  MRPVKLILRGPSRIRQVTIDPQPDFSFDDLQVELHSLEEKLRTSSMPFEKTYSRDFPVIRTMKRSSKPFVMGVYEDELQGIFSDGEVVRHQSSNAMHLNC
        M PVKL LR PS++ QVT+DP PDFSFDDL+ ELH LEE+L+ S+MPF+KT SRDFP+ +T KRSSKPFVMGVYEDEL  IFSD EV    SSNA   NC
Subjt:  MRPVKLILRGPSRIRQVTIDPQPDFSFDDLQVELHSLEEKLRTSSMPFEKTYSRDFPVIRTMKRSSKPFVMGVYEDELQGIFSDGEVVRHQSSNAMHLNC

Query:  DGIFLSDREDSNHESTLQVLVDLKEDVDLVESSLALQTYDRFLNMKEEIRNQLGRLETDLTTLNENSRAAISRIEKYYEARREADRRFDA----------
        DGIFLSD EDS+ ESTL+    LKEDVDLVESSLA  T+D  LN+KEEIRNQLGRLETDLTTLNE S AAIS+IEKYYEARREADRR D           
Subjt:  DGIFLSDREDSNHESTLQVLVDLKEDVDLVESSLALQTYDRFLNMKEEIRNQLGRLETDLTTLNENSRAAISRIEKYYEARREADRRFDA----------

Query:  ----------------------------------------------------------------AIEAERIGMK-----KAAENLKKIDVVKAQETIVGA
                                                                        AIEAER  MK     +AAEN KK+D+V+ QET+VGA
Subjt:  ----------------------------------------------------------------AIEAERIGMK-----KAAENLKKIDVVKAQETIVGA

Query:  QTTKP----------------------------------------------------------DFSIHEKHIARTIKQIGGTKENVRKKTSELLKSFMDP
         TTKP                                                          DFS HEKHIAR IKQIGGTKENVR KTSE+LK FM P
Subjt:  QTTKP----------------------------------------------------------DFSIHEKHIARTIKQIGGTKENVRKKTSELLKSFMDP

Query:  RCPQTISTAAFAEKVVLLSQIEYTNVPFAFSHIIVLVTSQVPSAMVLFLAELHRACIYTVPKHIEYSEAAFESKDSYYKTIGFREDNGKMECVENYLMRL
         CPQTIS AAFA+K+V  SQ E  +  FA SH+IVLVTSQVPSAMVL LAE HRACIYTVPKHI+YS AAFESK+SYYKTIGFREDNGKME VENYLMRL
Subjt:  RCPQTISTAAFAEKVVLLSQIEYTNVPFAFSHIIVLVTSQVPSAMVLFLAELHRACIYTVPKHIEYSEAAFESKDSYYKTIGFREDNGKMECVENYLMRL

Query:  EAYMKLYGALIQ-----------------------------------------VAGFALFSKYKSQFRKLLNIISDNFLSVLRGKENIELNGIIVKIEFY
        EAYMKLYGALIQ                                         VAGFALF KYKSQFRKLLNIISDNFLS LRGK N  LN II+ IE Y
Subjt:  EAYMKLYGALIQ-----------------------------------------VAGFALFSKYKSQFRKLLNIISDNFLSVLRGKENIELNGIIVKIEFY

Query:  LENQKFLQEPEGRIL
        LE+++FLQEPEGR L
Subjt:  LENQKFLQEPEGRIL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KS46 Uncharacterized protein

2.4e-144

52.68

Show/hide

Query:  MRPVKLILRGPSRIRQVTIDPQPDFSFDDLQVELHSLEEKLRTSSMPFEKTYSRDFPVIRTMKRSSKPFVMGVYEDELQGIFSDGEVVRHQSSNAMHLNC
        M PVKL LR PS+I QVT+DP PDFSFDDL+VELHSLEEKL  S+MPF+KT SRDFPV +T+KRS KPF+MGVYEDEL+ IF+D EVVR  SSNA   NC
Subjt:  MRPVKLILRGPSRIRQVTIDPQPDFSFDDLQVELHSLEEKLRTSSMPFEKTYSRDFPVIRTMKRSSKPFVMGVYEDELQGIFSDGEVVRHQSSNAMHLNC

Query:  DGIFLSDREDSNHESTLQVLVDLKEDVDLVESSLALQTYDRFLNMKEEIRNQLGRLETDLTTLNENSRAAISRIEKYYEARREADRRFD-----------
        DGIFLSD EDS+++ST +    LKED+DLVESSLA  T+D  LN+KEEIRNQLGRLETDLTTLNE S AAIS+IEKYYEARREADRR D           
Subjt:  DGIFLSDREDSNHESTLQVLVDLKEDVDLVESSLALQTYDRFLNMKEEIRNQLGRLETDLTTLNENSRAAISRIEKYYEARREADRRFD-----------

Query:  ---------------------------------------------------------------AAIEAERIGMK-----KAAENLKKIDVVKAQETIVGA
                                                                       AAIEAER   K     +AAENLKK++ V+ QET+VG+
Subjt:  ---------------------------------------------------------------AAIEAERIGMK-----KAAENLKKIDVVKAQETIVGA

Query:  QTTKP----------------------------------------------------------DFSIHEKHIARTIKQIGGTKENVRKKTSELLKSFMDP
         TTKP                                                          DF+ +E+HIAR IKQIGGTKENVR KTSE+LK FM P
Subjt:  QTTKP----------------------------------------------------------DFSIHEKHIARTIKQIGGTKENVRKKTSELLKSFMDP

Query:  RCPQTISTAAFAEKVVLLSQIEYTNVPFAFSHIIVLVTSQVPSAMVLFLAELHRACIYTVPKHIEYSEAAFESKDSYYKTIGFREDNGKMECVENYLMRL
         CPQTIS AAFA+K+V  SQ E  +  FA SH+IVLVTSQ PSA+VL LAELHRACIYTVPKHI+YS AAF SK+SYYKTIGFRE +GKME VE+YLMRL
Subjt:  RCPQTISTAAFAEKVVLLSQIEYTNVPFAFSHIIVLVTSQVPSAMVLFLAELHRACIYTVPKHIEYSEAAFESKDSYYKTIGFREDNGKMECVENYLMRL

Query:  EAYMKLYGALIQ-----------------------------------------VAGFALFSKYKSQFRKLLNIISDNFLSVLRGKENIELNGIIVKIEFY
        EAY+KLYGALIQ                                         VAGFA++ KYKSQFRKLLNIIS+NFLS LRGK N  LN II+ IE Y
Subjt:  EAYMKLYGALIQ-----------------------------------------VAGFALFSKYKSQFRKLLNIISDNFLSVLRGKENIELNGIIVKIEFY

Query:  LENQKFLQEPEGRIL
        LE+++FL+EPEG+ L
Subjt:  LENQKFLQEPEGRIL

A0A1S3BEB8 protein GLE1

1.8e-144

52.68

Show/hide

Query:  MRPVKLILRGPSRIRQVTIDPQPDFSFDDLQVELHSLEEKLRTSSMPFEKTYSRDFPVIRTMKRSSKPFVMGVYEDELQGIFSDGEVVRHQSSNAMHLNC
        M PVKL LR PS+I QV +DP PDFSFDDL++ELHSLEEKL  S+MPF+KT SRDFPV +T+KRSSKPF+MGVYEDEL+ IFSD EVV   SSNA   NC
Subjt:  MRPVKLILRGPSRIRQVTIDPQPDFSFDDLQVELHSLEEKLRTSSMPFEKTYSRDFPVIRTMKRSSKPFVMGVYEDELQGIFSDGEVVRHQSSNAMHLNC

Query:  DGIFLSDREDSNHESTLQVLVDLKEDVDLVESSLALQTYDRFLNMKEEIRNQLGRLETDLTTLNENSRAAISRIEKYYEARREADRRFD-----------
        DGIFLSD EDS++ESTL+    LKED+DLVESSLA  T+D  LN+KEEIRNQLGRLETDLTTLNE S AAIS+IEKYYEARREADRR D           
Subjt:  DGIFLSDREDSNHESTLQVLVDLKEDVDLVESSLALQTYDRFLNMKEEIRNQLGRLETDLTTLNENSRAAISRIEKYYEARREADRRFD-----------

Query:  ---------------------------------------------------------------AAIEAERIGMK-----KAAENLKKIDVVKAQETIVGA
                                                                       AAIEAER   K     +AAENLKK+D V+ QET+VG+
Subjt:  ---------------------------------------------------------------AAIEAERIGMK-----KAAENLKKIDVVKAQETIVGA

Query:  QTTKP----------------------------------------------------------DFSIHEKHIARTIKQIGGTKENVRKKTSELLKSFMDP
          TKP                                                          DFS +E+HIAR IKQIGGTKENVR KTSE+LK FM P
Subjt:  QTTKP----------------------------------------------------------DFSIHEKHIARTIKQIGGTKENVRKKTSELLKSFMDP

Query:  RCPQTISTAAFAEKVVLLSQIEYTNVPFAFSHIIVLVTSQVPSAMVLFLAELHRACIYTVPKHIEYSEAAFESKDSYYKTIGFREDNGKMECVENYLMRL
         CPQTIS AAFA+K+V  SQ E  +  FA SH+IVLVTSQ PSA+VL LAELHRACIYTVPKHI+YS AA+ESK+SYYKTIGFRE +GKME VE+YL RL
Subjt:  RCPQTISTAAFAEKVVLLSQIEYTNVPFAFSHIIVLVTSQVPSAMVLFLAELHRACIYTVPKHIEYSEAAFESKDSYYKTIGFREDNGKMECVENYLMRL

Query:  EAYMKLYGALIQ-----------------------------------------VAGFALFSKYKSQFRKLLNIISDNFLSVLRGKENIELNGIIVKIEFY
        EAY+KLY ALIQ                                         VAGFA++ KYKSQF KLLNIISDNFLS +RGK N  LN II+ IE Y
Subjt:  EAYMKLYGALIQ-----------------------------------------VAGFALFSKYKSQFRKLLNIISDNFLSVLRGKENIELNGIIVKIEFY

Query:  LENQKFLQEPEGRIL
        LE++KFL+EPEG+ L
Subjt:  LENQKFLQEPEGRIL

A0A5A7SUC8 Protein GLE1

1.9e-149

52.92

Show/hide

Query:  LTRSSKVIEAFQSLLMETMRPVKLILRGPSRIRQVTIDPQPDFSFDDLQVELHSLEEKLRTSSMPFEKTYSRDFPVIRTMKRSSKPFVMGVYEDELQGIF
        L  S  VIEA QSLL++TM PVKL LR PS+I QV +DP PDFSFDDL++ELHSLEEKL  S+MPF+KT SRDFPV +T+KRSSKPF+MGVYEDEL+ IF
Subjt:  LTRSSKVIEAFQSLLMETMRPVKLILRGPSRIRQVTIDPQPDFSFDDLQVELHSLEEKLRTSSMPFEKTYSRDFPVIRTMKRSSKPFVMGVYEDELQGIF

Query:  SDGEVVRHQSSNAMHLNCDGIFLSDREDSNHESTLQVLVDLKEDVDLVESSLALQTYDRFLNMKEEIRNQLGRLETDLTTLNENSRAAISRIEKYYEARR
        SD EVV   SSNA   NCDGIFLSD EDS++ESTL+    LKED+DLVESSLA  T+D  LN+KEEIRNQLGRLETDLTTLNE S AAIS+IEKYYEARR
Subjt:  SDGEVVRHQSSNAMHLNCDGIFLSDREDSNHESTLQVLVDLKEDVDLVESSLALQTYDRFLNMKEEIRNQLGRLETDLTTLNENSRAAISRIEKYYEARR

Query:  EADRRFD--------------------------------------------------------------------------AAIEAERIGMK-----KAA
        EADRR D                                                                          AAIEAER   K     +AA
Subjt:  EADRRFD--------------------------------------------------------------------------AAIEAERIGMK-----KAA

Query:  ENLKKIDVVKAQETIVGAQTTKP----------------------------------------------------------DFSIHEKHIARTIKQIGGT
        ENLKK+D V+ QET+VG+  TKP                                                          DFS +E+HIAR IKQIGGT
Subjt:  ENLKKIDVVKAQETIVGAQTTKP----------------------------------------------------------DFSIHEKHIARTIKQIGGT

Query:  KENVRKKTSELLKSFMDPRCPQTISTAAFAEKVVLLSQIEYTNVPFAFSHIIVLVTSQVPSAMVLFLAELHRACIYTVPKHIEYSEAAFESKDSYYKTIG
        KENVR KTSE+LK FM P CPQTIS AAFA+K+V  SQ E  +  FA SH+IVLVTSQ PSA+VL LAELHRACIYTVPKHI+YS AA+ESK+SYYKTIG
Subjt:  KENVRKKTSELLKSFMDPRCPQTISTAAFAEKVVLLSQIEYTNVPFAFSHIIVLVTSQVPSAMVLFLAELHRACIYTVPKHIEYSEAAFESKDSYYKTIG

Query:  FREDNGKMECVENYLMRLEAYMKLYGALIQ-----------------------------------------VAGFALFSKYKSQFRKLLNIISDNFLSVL
        FRE +GKME VE+YL RLEAY+KLY ALIQ                                         VAGFA++ KYKSQF KLLNIISDNFLS +
Subjt:  FREDNGKMECVENYLMRLEAYMKLYGALIQ-----------------------------------------VAGFALFSKYKSQFRKLLNIISDNFLSVL

Query:  RGKENIELNGIIVKIEFYLENQKFLQEPEGRIL
        RGK N  LN II+ IE YLE++KFL+EPEG+ L
Subjt:  RGKENIELNGIIVKIEFYLENQKFLQEPEGRIL

A0A6J1GYI2 protein GLE1 isoform X1

7.1e-149

54.85

Show/hide

Query:  MRPVKLILRGPSRIRQVTIDPQPDFSFDDLQVELHSLEEKLRTSSMPFEKTYSRDFPVIRTMKRSSKPFVMGVYEDELQGIFSDGEVVRHQSSNAMHLNC
        M PVKL LR PSR+ QVT DPQPDFSFDDL+VEL+SLEEKL+TS+ PF KT SRDFP+I+T KRSSKPFVMGVYEDELQ IF+DGEVV  Q SNA   NC
Subjt:  MRPVKLILRGPSRIRQVTIDPQPDFSFDDLQVELHSLEEKLRTSSMPFEKTYSRDFPVIRTMKRSSKPFVMGVYEDELQGIFSDGEVVRHQSSNAMHLNC

Query:  DGIFLSDREDSNHESTLQVLVDLKEDVDLVESSLALQTYDRFLNMKEEIRNQLGRLETDLTTLNENSRAAISRIEKYYEARREADRRFD-----------
        DG FLSD EDS++ESTL     L EDVDLVESSLA  T D  LN KEEIRNQLGRLET+LTTLNE S AA S+IEKYYEARREADRR D           
Subjt:  DGIFLSDREDSNHESTLQVLVDLKEDVDLVESSLALQTYDRFLNMKEEIRNQLGRLETDLTTLNENSRAAISRIEKYYEARREADRRFD-----------

Query:  ---------------------------------------------------------------AAIEAERIGMK-----KAAENLKKIDVVKAQETIVGA
                                                                       AAIEAE   MK     +AAENLKK+D V+AQETIVGA
Subjt:  ---------------------------------------------------------------AAIEAERIGMK-----KAAENLKKIDVVKAQETIVGA

Query:  QTTKP----------------------------------------------------------DFSIHEKHIARTIKQIGGTKENVRKKTSELLKSFMDP
         TTKP                                                          DFS HE+HIAR I+QI GTKENV  KTS+LLK FMDP
Subjt:  QTTKP----------------------------------------------------------DFSIHEKHIARTIKQIGGTKENVRKKTSELLKSFMDP

Query:  RCPQTISTAAFAEKVVLLSQIEYT-NVPFAFSHIIVLVTSQVPSAMVLFLAELHRACIYTVPKHIEYSEAAFESKDSYYKTIGFRED-NGKMECVENYLM
         CPQTIS AAFA+KVV  SQ E + N  FA SH+IVLVTSQVPSAMVL LAE HRACIYTVPKH+ YSEAAFESK+SYYKT+GFRED +GKME V++YL 
Subjt:  RCPQTISTAAFAEKVVLLSQIEYT-NVPFAFSHIIVLVTSQVPSAMVLFLAELHRACIYTVPKHIEYSEAAFESKDSYYKTIGFRED-NGKMECVENYLM

Query:  RLEAYMKLYGALI-----------------------------------------QVAGFALFSKYKSQFRKLLNIISDNFLSVLRGKENIELNGIIVKIE
        RLEAYMKLYGAL+                                         QVAGFALF KYKSQFRKLLNIISDNFLS LRGKEN  L  IIV+IE
Subjt:  RLEAYMKLYGALI-----------------------------------------QVAGFALFSKYKSQFRKLLNIISDNFLSVLRGKENIELNGIIVKIE

Query:  FYLENQKFLQEPEGRILQ
         YLE++KFLQEPEGR L+
Subjt:  FYLENQKFLQEPEGRILQ

A0A6J1K7Y4 protein GLE1 isoform X1

1.0e-147

54.53

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Query:  MRPVKLILRGPSRIRQVTIDPQPDFSFDDLQVELHSLEEKLRTSSMPFEKTYSRDFPVIRTMKRSSKPFVMGVYEDELQGIFSDGEVVRHQSSNAMHLNC
        M PVKL LR PSR+ QVT DPQPDFSFDDL+ EL+SLEEKL+TS+ PF KT SRDFP+I+T KRSSKPFVMGVYEDELQ IFSDGEVV  Q SNA   NC
Subjt:  MRPVKLILRGPSRIRQVTIDPQPDFSFDDLQVELHSLEEKLRTSSMPFEKTYSRDFPVIRTMKRSSKPFVMGVYEDELQGIFSDGEVVRHQSSNAMHLNC

Query:  DGIFLSDREDSNHESTLQVLVDLKEDVDLVESSLALQTYDRFLNMKEEIRNQLGRLETDLTTLNENSRAAISRIEKYYEARREADRRFD-----------
        DG FLSD EDS++E+TL+    L EDVDLVESSLA  TYD  LN KEEIRNQLGRLET+LTTLNE S AA S+IEKYYEARREADRR D           
Subjt:  DGIFLSDREDSNHESTLQVLVDLKEDVDLVESSLALQTYDRFLNMKEEIRNQLGRLETDLTTLNENSRAAISRIEKYYEARREADRRFD-----------

Query:  ---------------------------------------------------------------AAIEAERIGMK-----KAAENLKKIDVVKAQETIVGA
                                                                       AAIEAE   MK     +A ENLKK+D V+AQETIVGA
Subjt:  ---------------------------------------------------------------AAIEAERIGMK-----KAAENLKKIDVVKAQETIVGA

Query:  QTTKP----------------------------------------------------------DFSIHEKHIARTIKQIGGTKENVRKKTSELLKSFMDP
         TTKP                                                          DFS HE+HIAR I+QI GTKENV  KTS+LLK FMDP
Subjt:  QTTKP----------------------------------------------------------DFSIHEKHIARTIKQIGGTKENVRKKTSELLKSFMDP

Query:  RCPQTISTAAFAEKVVLLSQIEYT-NVPFAFSHIIVLVTSQVPSAMVLFLAELHRACIYTVPKHIEYSEAAFESKDSYYKTIGFRED-NGKMECVENYLM
         CPQTIS AAFA+KVV  SQ E + N  FA SH+IVLVTSQVPSAMVL LAE HRACIYTVPKHI YSEAAFESK+SYYKT+GFRED +GKME V++YL 
Subjt:  RCPQTISTAAFAEKVVLLSQIEYT-NVPFAFSHIIVLVTSQVPSAMVLFLAELHRACIYTVPKHIEYSEAAFESKDSYYKTIGFRED-NGKMECVENYLM

Query:  RLEAYMKLYGALI-----------------------------------------QVAGFALFSKYKSQFRKLLNIISDNFLSVLRGKENIELNGIIVKIE
        RLEAYMKLYGAL+                                         QVAGFAL  KYKSQFRKLLNIISDNFL  LRGKEN  L  IIV+IE
Subjt:  RLEAYMKLYGALI-----------------------------------------QVAGFALFSKYKSQFRKLLNIISDNFLSVLRGKENIELNGIIVKIE

Query:  FYLENQKFLQEPEGRILQ
         YLE++KFLQEPEGR L+
Subjt:  FYLENQKFLQEPEGRILQ

SwissProt top hits

e value

%identity

Alignment

Q0WPZ7 Protein GLE1

1.1e-45

29.11

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Query:  PSRIRQVTIDPQPDFSFDDLQVELHSLEEKLRTSSM---PFEKTYSRDFPVIRTMKRSSKPFVMGVYEDEL---QGIFSDGEVVRHQSSN----AMHLNC
        P  +  ++IDP+P+++F+ L  E+ S+E+KL   SM   P   T  R       M R    FVM V EDE+   +G  SD E      S          C
Subjt:  PSRIRQVTIDPQPDFSFDDLQVELHSLEEKLRTSSM---PFEKTYSRDFPVIRTMKRSSKPFVMGVYEDEL---QGIFSDGEVVRHQSSN----AMHLNC

Query:  DGIFLSDREDSNHESTLQVLVDLKEDVDLVESSLALQTYDRFLNMKEEIRNQLGRLETDLTTLNENSRAAISRIEKYYEARREADRRFD-----------
        D ++LSD  D   +   + +++    + L ES+L     D    +K++IRNQ+  +ET++    E S +AI+R+EKY E R+E +R+ D           
Subjt:  DGIFLSDREDSNHESTLQVLVDLKEDVDLVESSLALQTYDRFLNMKEEIRNQLGRLETDLTTLNENSRAAISRIEKYYEARREADRRFD-----------

Query:  -----------------------------------------------AAIEAERIGMKKAAENLKKIDVVKAQ------------------------ETI
                                                       A  EA+ +   +A E  K+++   A+                        E++
Subjt:  -----------------------------------------------AAIEAERIGMKKAAENLKKIDVVKAQ------------------------ETI

Query:  VGAQTT-----------------------------------------KPDFSIHEKHIARTIKQIGGTKENVRKKTSELLKSFMDPRCPQTISTAAFAEK
         G+  T                                           +FS  EKHI R I+QI GTK++V  K ++++K F DPRCP +IS AAFA+K
Subjt:  VGAQTT-----------------------------------------KPDFSIHEKHIARTIKQIGGTKENVRKKTSELLKSFMDPRCPQTISTAAFAEK

Query:  VVLLSQIEYTNVPFAFSHIIVLVTSQVPSAMVLFLAELHRACIYTVPKHIEYSEAAFESK-----DSYYKTIG------FREDNG-KMECVEN-------
        +V     E  N PFA S++IV + SQ P  M + LAE H+ACIYTVPKHI  S++A++S      DS  +  G       R  N   +  +E+       
Subjt:  VVLLSQIEYTNVPFAFSHIIVLVTSQVPSAMVLFLAELHRACIYTVPKHIEYSEAAFESK-----DSYYKTIG------FREDNG-KMECVEN-------

Query:  YLMRLEAYMKLYGAL---IQVAGFALFSKYKSQFRKLLNIISDNFLSVLRGKENI-ELNGIIVKIEFYLENQKFLQEPEGRILQ
        +L ++ A      AL   +Q AGF L  +YKSQF K++N++ ++FL  LR K++  +L  II +I  YL+++ +L+EPEGR ++
Subjt:  YLMRLEAYMKLYGAL---IQVAGFALFSKYKSQFRKLLNIISDNFLSVLRGKENI-ELNGIIVKIEFYLENQKFLQEPEGRILQ

Q6DRB1 Nucleoporin GLE1

3.6e-04

29.55

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Query:  RKKTSELLKSFMDPRCPQTISTAAF--AEKVVLLSQIEYT---NVPFAFSHIIVLVTSQVPSAMVLFLAELHRACIYTVPKHIEYSEAAFESKDSYYKTI
        R+  +   K+    + PQ +  A++  AEK V   + E     +  F    +   +    P    L LA LH+ C Y VP H    E+   S + Y K +
Subjt:  RKKTSELLKSFMDPRCPQTISTAAF--AEKVVLLSQIEYT---NVPFAFSHIIVLVTSQVPSAMVLFLAELHRACIYTVPKHIEYSEAAFESKDSYYKTI

Query:  GFREDNGKMECVENYLMRLEAYMKLYGALIQV
        G+R D GK+E  +++L R+   ++LY A+IQ+
Subjt:  GFREDNGKMECVENYLMRLEAYMKLYGALIQV

Arabidopsis top hits

e value

%identity

Alignment

AT1G13120.1 null

7.8e-47

29.11

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Query:  PSRIRQVTIDPQPDFSFDDLQVELHSLEEKLRTSSM---PFEKTYSRDFPVIRTMKRSSKPFVMGVYEDEL---QGIFSDGEVVRHQSSN----AMHLNC
        P  +  ++IDP+P+++F+ L  E+ S+E+KL   SM   P   T  R       M R    FVM V EDE+   +G  SD E      S          C
Subjt:  PSRIRQVTIDPQPDFSFDDLQVELHSLEEKLRTSSM---PFEKTYSRDFPVIRTMKRSSKPFVMGVYEDEL---QGIFSDGEVVRHQSSN----AMHLNC

Query:  DGIFLSDREDSNHESTLQVLVDLKEDVDLVESSLALQTYDRFLNMKEEIRNQLGRLETDLTTLNENSRAAISRIEKYYEARREADRRFD-----------
        D ++LSD  D   +   + +++    + L ES+L     D    +K++IRNQ+  +ET++    E S +AI+R+EKY E R+E +R+ D           
Subjt:  DGIFLSDREDSNHESTLQVLVDLKEDVDLVESSLALQTYDRFLNMKEEIRNQLGRLETDLTTLNENSRAAISRIEKYYEARREADRRFD-----------

Query:  -----------------------------------------------AAIEAERIGMKKAAENLKKIDVVKAQ------------------------ETI
                                                       A  EA+ +   +A E  K+++   A+                        E++
Subjt:  -----------------------------------------------AAIEAERIGMKKAAENLKKIDVVKAQ------------------------ETI

Query:  VGAQTT-----------------------------------------KPDFSIHEKHIARTIKQIGGTKENVRKKTSELLKSFMDPRCPQTISTAAFAEK
         G+  T                                           +FS  EKHI R I+QI GTK++V  K ++++K F DPRCP +IS AAFA+K
Subjt:  VGAQTT-----------------------------------------KPDFSIHEKHIARTIKQIGGTKENVRKKTSELLKSFMDPRCPQTISTAAFAEK

Query:  VVLLSQIEYTNVPFAFSHIIVLVTSQVPSAMVLFLAELHRACIYTVPKHIEYSEAAFESK-----DSYYKTIG------FREDNG-KMECVEN-------
        +V     E  N PFA S++IV + SQ P  M + LAE H+ACIYTVPKHI  S++A++S      DS  +  G       R  N   +  +E+       
Subjt:  VVLLSQIEYTNVPFAFSHIIVLVTSQVPSAMVLFLAELHRACIYTVPKHIEYSEAAFESK-----DSYYKTIG------FREDNG-KMECVEN-------

Query:  YLMRLEAYMKLYGAL---IQVAGFALFSKYKSQFRKLLNIISDNFLSVLRGKENI-ELNGIIVKIEFYLENQKFLQEPEGRILQ
        +L ++ A      AL   +Q AGF L  +YKSQF K++N++ ++FL  LR K++  +L  II +I  YL+++ +L+EPEGR ++
Subjt:  YLMRLEAYMKLYGAL---IQVAGFALFSKYKSQFRKLLNIISDNFLSVLRGKENI-ELNGIIVKIEFYLENQKFLQEPEGRILQ

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTATTATTCTCCTTCCAACGAGTTTCAGCTTCGTCGAGATCCACACGAAGAGGCCCAACGACGGCGAACAGCGGCCGGAAACCAAAGAAGACACGCAACCCCCCTTGG
CGAGTTTCGACCTAACCACGAACACCGACCTTACTACTCCAACCTCGACGGCGTGACCCACCCACGAACACCGCGACGGCTTCTTCGTCTAACGGTGTTGCAAGAGCTTC
TGTTGGCAATTTCTCCGTTTCAGCAAGGATTAACACGTTCCAGCAAGGTCATTGAAGCCTTTCAAAGTTTGCTTATGGAAACTATGAGGCCTGTTAAGTTGATCCTTCGA
GGTCCTTCTAGGATACGTCAAGTTACAATTGACCCACAACCGGATTTCAGTTTTGACGATTTACAAGTGGAACTTCATTCCTTGGAGGAGAAGCTAAGGACGTCCTCAAT
GCCTTTCGAAAAAACATATTCACGAGACTTTCCTGTCATAAGAACTATGAAGAGAAGCTCCAAGCCTTTTGTAATGGGCGTGTATGAAGATGAACTACAAGGAATATTTA
GTGATGGTGAAGTGGTTCGTCACCAAAGTTCAAATGCTATGCACTTAAATTGTGATGGAATTTTTCTCAGTGATCGTGAAGATTCCAACCATGAATCAACTCTTCAAGTA
CTAGTCGATCTGAAGGAGGACGTGGATTTAGTTGAAAGTTCTTTAGCTCTTCAAACATATGATCGTTTCCTTAATATGAAGGAGGAAATCAGGAACCAACTCGGAAGGTT
GGAGACCGATCTTACTACTTTAAATGAAAATTCGAGGGCTGCAATCTCTCGAATTGAGAAATACTATGAGGCAAGACGAGAAGCTGACCGGAGATTTGATGCTGCCATAG
AAGCTGAGAGGATAGGAATGAAAAAAGCAGCTGAAAACCTAAAAAAGATTGATGTTGTAAAAGCACAAGAAACTATTGTTGGGGCGCAAACTACCAAACCGGATTTTAGC
ATCCATGAAAAGCATATTGCTAGGACAATTAAACAAATAGGGGGAACAAAAGAGAATGTCAGAAAAAAAACCAGTGAACTTCTCAAGAGTTTCATGGATCCTCGTTGTCC
ACAAACTATTAGCACTGCAGCATTTGCAGAGAAGGTCGTTCTCCTTTCTCAAATTGAATATACAAATGTACCCTTTGCATTCAGCCATATTATTGTTCTTGTTACCTCAC
AGGTCCCAAGTGCTATGGTTCTTTTTCTTGCAGAGCTCCATAGAGCTTGCATTTACACGGTTCCGAAGCACATAGAATATTCAGAGGCTGCATTTGAATCCAAAGATTCA
TATTACAAGACTATTGGATTTCGAGAGGACAACGGAAAAATGGAGTGTGTTGAAAATTATTTGATGCGGCTAGAAGCATACATGAAACTATATGGGGCATTGATTCAGGT
AGCAGGCTTTGCACTGTTTAGTAAATACAAATCCCAGTTCAGGAAGCTTTTGAACATCATCTCTGACAACTTCTTGAGTGTGCTAAGAGGAAAAGAGAACATAGAGTTGA
ATGGGATCATTGTGAAAATTGAATTCTATTTGGAAAACCAGAAATTCCTTCAAGAACCAGAAGGAAGAATCTTGCAGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MYYSPSNEFQLRRDPHEEAQRRRTAAGNQRRHATPLGEFRPNHEHRPYYSNLDGVTHPRTPRRLLRLTVLQELLLAISPFQQGLTRSSKVIEAFQSLLMETMRPVKLILR
GPSRIRQVTIDPQPDFSFDDLQVELHSLEEKLRTSSMPFEKTYSRDFPVIRTMKRSSKPFVMGVYEDELQGIFSDGEVVRHQSSNAMHLNCDGIFLSDREDSNHESTLQV
LVDLKEDVDLVESSLALQTYDRFLNMKEEIRNQLGRLETDLTTLNENSRAAISRIEKYYEARREADRRFDAAIEAERIGMKKAAENLKKIDVVKAQETIVGAQTTKPDFS
IHEKHIARTIKQIGGTKENVRKKTSELLKSFMDPRCPQTISTAAFAEKVVLLSQIEYTNVPFAFSHIIVLVTSQVPSAMVLFLAELHRACIYTVPKHIEYSEAAFESKDS
YYKTIGFREDNGKMECVENYLMRLEAYMKLYGALIQVAGFALFSKYKSQFRKLLNIISDNFLSVLRGKENIELNGIIVKIEFYLENQKFLQEPEGRILQ

Lsi04G006380 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome