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Lsi04G006520 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G006520
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionABC transporter
Genome locationchr04:5959399..5959672
RNA-Seq ExpressionLsi04G006520
SyntenyLsi04G006520
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034219.1 putative ABC transporter C family member 15 [Cucumis melo var. makuwa]6.9e-0956.25Show/hide
Query:  MTAIFAAPISFFDVKPSSQILTK-------------------------LLSIIILISKVASQIFPLFLAVFAISIWYQAR
        +T+IFAAPISFFD KPSSQIL++                         LLSIIIL+SKVA Q+FPLFL V AISIWYQAR
Subjt:  MTAIFAAPISFFDVKPSSQILTK-------------------------LLSIIILISKVASQIFPLFLAVFAISIWYQAR

XP_004135511.2 putative ABC transporter C family member 15 [Cucumis sativus]1.3e-0755.13Show/hide
Query:  MTAIFAAPISFFDVKPSSQILTK-------------------------LLSIIILISKVASQIFPLFLAVFAISIWYQ
        +T+IFAAPISFFD KPSSQIL +                         LLSIIIL+SKVA Q+FPLFL V AISIWYQ
Subjt:  MTAIFAAPISFFDVKPSSQILTK-------------------------LLSIIILISKVASQIFPLFLAVFAISIWYQ

XP_008446087.1 PREDICTED: putative ABC transporter C family member 15 [Cucumis melo]1.0e-0755.13Show/hide
Query:  MTAIFAAPISFFDVKPSSQILTK-------------------------LLSIIILISKVASQIFPLFLAVFAISIWYQ
        +T+IFAAPISFFD KPSSQIL++                         LLSIIIL+SKVA Q+FPLFL V AISIWYQ
Subjt:  MTAIFAAPISFFDVKPSSQILTK-------------------------LLSIIILISKVASQIFPLFLAVFAISIWYQ

XP_022151948.1 putative ABC transporter C family member 15 [Momordica charantia]1.7e-0753.85Show/hide
Query:  MTAIFAAPISFFDVKPSSQILTK-------------------------LLSIIILISKVASQIFPLFLAVFAISIWYQ
        +TA+FA+PISFFD KPSSQIL +                         LLSIIIL+SKVA Q+FPLFL V AISIWYQ
Subjt:  MTAIFAAPISFFDVKPSSQILTK-------------------------LLSIIILISKVASQIFPLFLAVFAISIWYQ

XP_038892249.1 putative ABC transporter C family member 15 [Benincasa hispida]1.7e-0753.85Show/hide
Query:  MTAIFAAPISFFDVKPSSQILTK-------------------------LLSIIILISKVASQIFPLFLAVFAISIWYQ
        +T+IFAAPISFFD KPSSQIL +                         LLSIIIL+SKVA Q+FPLFL V AIS+WYQ
Subjt:  MTAIFAAPISFFDVKPSSQILTK-------------------------LLSIIILISKVASQIFPLFLAVFAISIWYQ

TrEMBL top hitse value%identityAlignment
A0A0A0KS22 Uncharacterized protein6.3e-0855.13Show/hide
Query:  MTAIFAAPISFFDVKPSSQILTK-------------------------LLSIIILISKVASQIFPLFLAVFAISIWYQ
        +T+IFAAPISFFD KPSSQIL +                         LLSIIIL+SKVA Q+FPLFL V AISIWYQ
Subjt:  MTAIFAAPISFFDVKPSSQILTK-------------------------LLSIIILISKVASQIFPLFLAVFAISIWYQ

A0A1S3BF27 putative ABC transporter C family member 154.8e-0855.13Show/hide
Query:  MTAIFAAPISFFDVKPSSQILTK-------------------------LLSIIILISKVASQIFPLFLAVFAISIWYQ
        +T+IFAAPISFFD KPSSQIL++                         LLSIIIL+SKVA Q+FPLFL V AISIWYQ
Subjt:  MTAIFAAPISFFDVKPSSQILTK-------------------------LLSIIILISKVASQIFPLFLAVFAISIWYQ

A0A5D3CUX0 Putative ABC transporter C family member 153.3e-0956.25Show/hide
Query:  MTAIFAAPISFFDVKPSSQILTK-------------------------LLSIIILISKVASQIFPLFLAVFAISIWYQAR
        +T+IFAAPISFFD KPSSQIL++                         LLSIIIL+SKVA Q+FPLFL V AISIWYQAR
Subjt:  MTAIFAAPISFFDVKPSSQILTK-------------------------LLSIIILISKVASQIFPLFLAVFAISIWYQAR

A0A6J1DDJ4 putative ABC transporter C family member 158.2e-0853.85Show/hide
Query:  MTAIFAAPISFFDVKPSSQILTK-------------------------LLSIIILISKVASQIFPLFLAVFAISIWYQ
        +TA+FA+PISFFD KPSSQIL +                         LLSIIIL+SKVA Q+FPLFL V AISIWYQ
Subjt:  MTAIFAAPISFFDVKPSSQILTK-------------------------LLSIIILISKVASQIFPLFLAVFAISIWYQ

A0A6J1HUS2 putative ABC transporter C family member 158.2e-0855.13Show/hide
Query:  MTAIFAAPISFFDVKPSSQILTK-------------------------LLSIIILISKVASQIFPLFLAVFAISIWYQ
        +T+IFAAPISFFDVKPSSQIL +                         LLSIIIL+SKVA  +FPLFL V AISIWYQ
Subjt:  MTAIFAAPISFFDVKPSSQILTK-------------------------LLSIIILISKVASQIFPLFLAVFAISIWYQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGCAATTTTTGCAGCACCCATTTCATTTTTTGATGTGAAACCATCAAGCCAAATCCTTACCAAGCTGTTGAGTATCATCATCCTAATATCCAAGGTTGCATCGCA
AATTTTTCCGCTCTTCCTCGCTGTCTTTGCTATCTCTATATGGTATCAGGCAAGAACA
mRNA sequenceShow/hide mRNA sequence
TTGCTGGAATTATTTTTTAATGACAGCAATTTTTGCAGCACCCATTTCATTTTTTGATGTGAAACCATCAAGCCAAATCCTTACCAAGCTGTTGAGTATCATCATCCTAA
TATCCAAGGTTGCATCGCAAATTTTTCCGCTCTTCCTCGCTGTCTTTGCTATCTCTATATGGTATCAGGCAAGAACA
Protein sequenceShow/hide protein sequence
MTAIFAAPISFFDVKPSSQILTKLLSIIILISKVASQIFPLFLAVFAISIWYQART