; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G006730 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G006730
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSignal peptidase complex subunit 1
Genome locationchr04:6166414..6167648
RNA-Seq ExpressionLsi04G006730
SyntenyLsi04G006730
Gene Ontology termsGO:0006465 - signal peptide processing (biological process)
GO:0005787 - signal peptidase complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009542 - Signal peptidase complex subunit Spc1/SPCS1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN51679.1 hypothetical protein Csa_009252 [Cucumis sativus]4.0e-4661.98Show/hide
Query:  VGSHRTAEILRVNSSESGP-------------KSIDISSFPPADHSPLDLTSSSPNSPTVKSSYGVMTNLSSLAFYASFRVGSDDYLLVFH--------M
        VG H TAEILRVNSS+SGP             K+ID   F      P  L  S    P       ++ +LS  +    F + +   L +          M
Subjt:  VGSHRTAEILRVNSSESGP-------------KSIDISSFPPADHSPLDLTSSSPNSPTVKSSYGVMTNLSSLAFYASFRVGSDDYLLVFH--------M

Query:  DWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVVLKKKPAKK
        DWQGQKLAEQLMQ+MLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPS+AEKYPKPQPQEPVVLKKKPAKK
Subjt:  DWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVVLKKKPAKK

XP_004135313.1 probable signal peptidase complex subunit 1 [Cucumis sativus]9.1e-4397.85Show/hide
Query:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVVLKKKPAKK
        MDWQGQKLAEQLMQ+MLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPS+AEKYPKPQPQEPVVLKKKPAKK
Subjt:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVVLKKKPAKK

XP_008446045.1 PREDICTED: probable signal peptidase complex subunit 1 [Cucumis melo]4.5e-4296.77Show/hide
Query:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVVLKKKPAKK
        MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFR+MILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPS+AEKYPKPQPQEPVV KKKPAKK
Subjt:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVVLKKKPAKK

XP_023549840.1 probable signal peptidase complex subunit 1 [Cucurbita pepo subsp. pepo]2.5e-4093.55Show/hide
Query:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVVLKKKPAKK
        MDWQGQKLAEQ+MQIMLVAFAVVAFLTGYVM SFR+M+LVYAGGV LTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVVLKKKP KK
Subjt:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVVLKKKPAKK

XP_038882954.1 probable signal peptidase complex subunit 1 [Benincasa hispida]6.5e-4194.62Show/hide
Query:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVVLKKKPAKK
        MDWQGQKLAEQLMQIMLVAFAVVAFLTGY+MGSFR+MILVYAGGV LTTLITVPNWPFFNRHPLKWLDPS+AEKYPKPQPQEPVVLKKK AKK
Subjt:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVVLKKKPAKK

TrEMBL top hitse value%identityAlignment
A0A0A0KS09 Uncharacterized protein1.9e-4661.98Show/hide
Query:  VGSHRTAEILRVNSSESGP-------------KSIDISSFPPADHSPLDLTSSSPNSPTVKSSYGVMTNLSSLAFYASFRVGSDDYLLVFH--------M
        VG H TAEILRVNSS+SGP             K+ID   F      P  L  S    P       ++ +LS  +    F + +   L +          M
Subjt:  VGSHRTAEILRVNSSESGP-------------KSIDISSFPPADHSPLDLTSSSPNSPTVKSSYGVMTNLSSLAFYASFRVGSDDYLLVFH--------M

Query:  DWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVVLKKKPAKK
        DWQGQKLAEQLMQ+MLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPS+AEKYPKPQPQEPVVLKKKPAKK
Subjt:  DWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVVLKKKPAKK

A0A1S3BET6 probable signal peptidase complex subunit 12.2e-4296.77Show/hide
Query:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVVLKKKPAKK
        MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFR+MILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPS+AEKYPKPQPQEPVV KKKPAKK
Subjt:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVVLKKKPAKK

A0A5D3CZV6 Putative signal peptidase complex subunit 12.2e-4296.77Show/hide
Query:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVVLKKKPAKK
        MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFR+MILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPS+AEKYPKPQPQEPVV KKKPAKK
Subjt:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVVLKKKPAKK

A0A6J1GX63 probable signal peptidase complex subunit 11.7e-3991.4Show/hide
Query:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVVLKKKPAKK
        MDWQGQKLAEQ+MQIMLVAFAVVAFLTGYVM SFR+M+LVYAGGV LTTLITVPNWPFFNRHPLKWLDP VAEKYPKPQPQEPV LKKKP KK
Subjt:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVVLKKKPAKK

A0A6J1KDF1 probable signal peptidase complex subunit 11.3e-3992.47Show/hide
Query:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVVLKKKPAKK
        MDWQGQKLAEQ+MQIMLVAFAVVAFLTGYVM SFR+M+LVYA GV LTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVVLKKKP KK
Subjt:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVVLKKKPAKK

SwissProt top hitse value%identityAlignment
B0FWK4 Signal peptidase complex subunit 13.6e-1041.77Show/hide
Query:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWL---DPSVAEKYP
        MD++GQKLAEQ+ Q +++  A+V F+ GYV   F   + +   G   + L+T+P WP + RHPLKWL   D    +K P
Subjt:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWL---DPSVAEKYP

Q3T134 Signal peptidase complex subunit 12.8e-1041.77Show/hide
Query:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWL---DPSVAEKYP
        MD++GQKLAEQ+ Q +++  A+V F+ GY+   F   + +   G   + L+T+P WP + RHPLKWL   D S  +K P
Subjt:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWL---DPSVAEKYP

Q944J0 Probable signal peptidase complex subunit 11.5e-2768.82Show/hide
Query:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVVLKKKPAKK
        MDWQGQKL EQLMQI+LV   VVA + GY   SFR M+L+YAGGV LTTL+TVPNWPF+N HPLKWLDPS AEK+PKP+    V  KKK +KK
Subjt:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVVLKKKPAKK

Q9D958 Signal peptidase complex subunit 14.7e-1044.78Show/hide
Query:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWL
        MD++GQKLAEQ+ Q +++  A+V F+ GYV   F   + +   G   + L+T+P WP + RHPLKWL
Subjt:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWL

Q9Y6A9 Signal peptidase complex subunit 14.7e-1041.77Show/hide
Query:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWL---DPSVAEKYP
        MD++GQKLAEQ+ Q +++  A+V F+ GYV   F   + +   G   + L+T+P WP + RHPLKWL   + S  +K P
Subjt:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWL---DPSVAEKYP

Arabidopsis top hitse value%identityAlignment
AT2G22425.1 Microsomal signal peptidase 12 kDa subunit (SPC12)1.0e-2868.82Show/hide
Query:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVVLKKKPAKK
        MDWQGQKL EQLMQI+LV   VVA + GY   SFR M+L+YAGGV LTTL+TVPNWPF+N HPLKWLDPS AEK+PKP+    V  KKK +KK
Subjt:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVVLKKKPAKK

AT2G22425.2 Microsomal signal peptidase 12 kDa subunit (SPC12)1.0e-2868.82Show/hide
Query:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVVLKKKPAKK
        MDWQGQKL EQLMQI+LV   VVA + GY   SFR M+L+YAGGV LTTL+TVPNWPF+N HPLKWLDPS AEK+PKP+    V  KKK +KK
Subjt:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVVLKKKPAKK

AT4G40042.1 Microsomal signal peptidase 12 kDa subunit (SPC12)1.6e-2968.82Show/hide
Query:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVVLKKKPAKK
        MDWQGQKLAEQLMQI+L+  AVV+F+ GY   SFR+M+L+YAGGV LTTLIT+PNWP FNRH LKWLDPS AEK+PKPQ       KK  +KK
Subjt:  MDWQGQKLAEQLMQIMLVAFAVVAFLTGYVMGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVVLKKKPAKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTGGGAAGTCATCGGACGGCTGAGATTTTACGTGTGAATTCTTCCGAATCAGGACCGAAATCAATTGACATATCATCGTTTCCTCCAGCTGATCATTCCCCTTT
GGACTTAACATCGTCGTCTCCAAATTCGCCGACAGTTAAATCTTCCTATGGAGTTATGACTAATCTTTCTTCATTGGCGTTCTACGCCTCCTTCCGGGTTGGATCTGACG
ATTATCTTCTTGTTTTCCATATGGACTGGCAAGGGCAAAAGCTAGCGGAGCAGTTGATGCAGATTATGTTGGTTGCATTTGCCGTGGTGGCCTTTTTGACTGGCTATGTT
ATGGGATCGTTTCGGCTGATGATCTTGGTTTACGCTGGCGGTGTGTTTCTCACCACATTAATCACTGTTCCGAATTGGCCTTTCTTCAATCGCCACCCGCTCAAGTGGTT
GGATCCTAGTGTGGCTGAAAAATACCCTAAGCCGCAACCGCAGGAGCCTGTGGTTTTGAAGAAGAAACCTGCCAAGAAGCCAGCTCTAATCTCACGGGACAACCCACTTG
ACCCTACAATATTTGGGTGTCAAGGAAACCCATATGATATCATTGCAATTTACATTATC
mRNA sequenceShow/hide mRNA sequence
ATGGCTGTGGGAAGTCATCGGACGGCTGAGATTTTACGTGTGAATTCTTCCGAATCAGGACCGAAATCAATTGACATATCATCGTTTCCTCCAGCTGATCATTCCCCTTT
GGACTTAACATCGTCGTCTCCAAATTCGCCGACAGTTAAATCTTCCTATGGAGTTATGACTAATCTTTCTTCATTGGCGTTCTACGCCTCCTTCCGGGTTGGATCTGACG
ATTATCTTCTTGTTTTCCATATGGACTGGCAAGGGCAAAAGCTAGCGGAGCAGTTGATGCAGATTATGTTGGTTGCATTTGCCGTGGTGGCCTTTTTGACTGGCTATGTT
ATGGGATCGTTTCGGCTGATGATCTTGGTTTACGCTGGCGGTGTGTTTCTCACCACATTAATCACTGTTCCGAATTGGCCTTTCTTCAATCGCCACCCGCTCAAGTGGTT
GGATCCTAGTGTGGCTGAAAAATACCCTAAGCCGCAACCGCAGGAGCCTGTGGTTTTGAAGAAGAAACCTGCCAAGAAGCCAGCTCTAATCTCACGGGACAACCCACTTG
ACCCTACAATATTTGGGTGTCAAGGAAACCCATATGATATCATTGCAATTTACATTATC
Protein sequenceShow/hide protein sequence
MAVGSHRTAEILRVNSSESGPKSIDISSFPPADHSPLDLTSSSPNSPTVKSSYGVMTNLSSLAFYASFRVGSDDYLLVFHMDWQGQKLAEQLMQIMLVAFAVVAFLTGYV
MGSFRLMILVYAGGVFLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVVLKKKPAKKPALISRDNPLDPTIFGCQGNPYDIIAIYII