; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G006810 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G006810
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRibosomal protein L22p/L17e family protein isoform 1
Genome locationchr04:6236427..6236702
RNA-Seq ExpressionLsi04G006810
SyntenyLsi04G006810
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR035204 - NADH-ubiquinone oxidoreductase 11kDa subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012731.1 hypothetical protein SDJN02_25484, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-4290.11Show/hide
Query:  MKFVMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPLRPYGFWTFERHNSQLNWDAQISQAPGRRDPYDDMLQDINNNSK
        MKF+MEFAENLVLR+MEDPKERDRKFRE +YAVKDRCQKTKEMWSYPLRPYGFWTF+RHN+QL+WDAQISQ PGRRDPYDDMLQDI+NNSK
Subjt:  MKFVMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPLRPYGFWTFERHNSQLNWDAQISQAPGRRDPYDDMLQDINNNSK
XP_011655561.1 uncharacterized protein LOC101213251 [Cucumis sativus]5.9e-4287.91Show/hide
Query:  MKFVMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPLRPYGFWTFERHNSQLNWDAQISQAPGRRDPYDDMLQDINNNSK
        MKF+MEFAE+LVLRLMEDPKERDR+FREH+YA+KDRCQKTKEMWSYPLRPYGFWTF+RHNSQL WD QISQ PGRRDPYDDMLQD NN+SK
Subjt:  MKFVMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPLRPYGFWTFERHNSQLNWDAQISQAPGRRDPYDDMLQDINNNSK
XP_022151828.1 uncharacterized protein LOC111019716 [Momordica charantia]5.7e-4596.7Show/hide
Query:  MKFVMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPLRPYGFWTFERHNSQLNWDAQISQAPGRRDPYDDMLQDINNNSK
        MKFVMEFAENLV+RLMEDPKERDRKFREH+YAVKDRCQKTKEMWSYPLRPYGFWTFERHNSQL WDAQISQAPGRRDPYDDMLQDINNNSK
Subjt:  MKFVMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPLRPYGFWTFERHNSQLNWDAQISQAPGRRDPYDDMLQDINNNSK
XP_022956462.1 uncharacterized protein LOC111458190 [Cucurbita moschata]3.1e-4392.31Show/hide
Query:  MKFVMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPLRPYGFWTFERHNSQLNWDAQISQAPGRRDPYDDMLQDINNNSK
        MKF+MEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYP+RPYGFWTFERHN QL WDAQISQ PGRRDPYDD+L DINNNSK
Subjt:  MKFVMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPLRPYGFWTFERHNSQLNWDAQISQAPGRRDPYDDMLQDINNNSK
XP_038891434.1 uncharacterized protein LOC120080854 [Benincasa hispida]2.6e-4597.8Show/hide
Query:  MKFVMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPLRPYGFWTFERHNSQLNWDAQISQAPGRRDPYDDMLQDINNNSK
        MKFVMEFAENLVLRLMEDPKERDRKFREH+YAVKDRCQKTKEMWSYPLRPYGFWTFERHNSQL WDAQISQAPGRRDPYDDMLQDINNNSK
Subjt:  MKFVMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPLRPYGFWTFERHNSQLNWDAQISQAPGRRDPYDDMLQDINNNSK
TrEMBL top hitse value%identityAlignment
A0A1S3BE41 uncharacterized protein LOC1034888888.3e-4289.01Show/hide
Query:  MKFVMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPLRPYGFWTFERHNSQLNWDAQISQAPGRRDPYDDMLQDINNNSK
        MKF+MEFAE+LVLRLMEDPKERDR+FREHVYAVKDRCQKTKEMWS PLRPYGFWTF+RHNSQL WD QISQ PGRRDPYDD+LQD NNNSK
Subjt:  MKFVMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPLRPYGFWTFERHNSQLNWDAQISQAPGRRDPYDDMLQDINNNSK
A0A5A7SSK1 Uncharacterized protein8.3e-4289.01Show/hide
Query:  MKFVMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPLRPYGFWTFERHNSQLNWDAQISQAPGRRDPYDDMLQDINNNSK
        MKF+MEFAE+LVLRLMEDPKERDR+FREHVYAVKDRCQKTKEMWS PLRPYGFWTF+RHNSQL WD QISQ PGRRDPYDD+LQD NNNSK
Subjt:  MKFVMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPLRPYGFWTFERHNSQLNWDAQISQAPGRRDPYDDMLQDINNNSK
A0A6J1DD92 uncharacterized protein LOC1110197162.8e-4596.7Show/hide
Query:  MKFVMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPLRPYGFWTFERHNSQLNWDAQISQAPGRRDPYDDMLQDINNNSK
        MKFVMEFAENLV+RLMEDPKERDRKFREH+YAVKDRCQKTKEMWSYPLRPYGFWTFERHNSQL WDAQISQAPGRRDPYDDMLQDINNNSK
Subjt:  MKFVMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPLRPYGFWTFERHNSQLNWDAQISQAPGRRDPYDDMLQDINNNSK
A0A6J1GWE2 uncharacterized protein LOC1114581901.5e-4392.31Show/hide
Query:  MKFVMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPLRPYGFWTFERHNSQLNWDAQISQAPGRRDPYDDMLQDINNNSK
        MKF+MEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYP+RPYGFWTFERHN QL WDAQISQ PGRRDPYDD+L DINNNSK
Subjt:  MKFVMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPLRPYGFWTFERHNSQLNWDAQISQAPGRRDPYDDMLQDINNNSK
A0A6J1K907 uncharacterized protein LOC1114933471.5e-4392.31Show/hide
Query:  MKFVMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPLRPYGFWTFERHNSQLNWDAQISQAPGRRDPYDDMLQDINNNSK
        MKF+MEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYP+RPYGFWTFERHN QL WDAQISQ PGRRDPYDD+L DINNNSK
Subjt:  MKFVMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPLRPYGFWTFERHNSQLNWDAQISQAPGRRDPYDDMLQDINNNSK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67350.1 unknown protein1.5e-3574.12Show/hide
Query:  MKFVMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPLRPYGFWTFERHNSQLNWDAQISQAPGRRDPYDDMLQD
        M F+MEFAENLVLRLME+P+ERDRK REH+Y + +RC+K KEMW+ P+RPYGFWTFERHN+QL WD QISQ  GRRDPYDD+L+D
Subjt:  MKFVMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPLRPYGFWTFERHNSQLNWDAQISQAPGRRDPYDDMLQD
AT1G67350.2 unknown protein1.5e-3574.12Show/hide
Query:  MKFVMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPLRPYGFWTFERHNSQLNWDAQISQAPGRRDPYDDMLQD
        M F+MEFAENLVLRLME+P+ERDRK REH+Y + +RC+K KEMW+ P+RPYGFWTFERHN+QL WD QISQ  GRRDPYDD+L+D
Subjt:  MKFVMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPLRPYGFWTFERHNSQLNWDAQISQAPGRRDPYDDMLQD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTCGTCATGGAGTTTGCTGAGAATTTGGTATTAAGACTTATGGAGGATCCTAAAGAGAGGGATCGCAAATTCAGAGAGCACGTTTACGCGGTCAAGGATCGGTG
CCAAAAGACGAAGGAGATGTGGAGTTATCCTCTCCGTCCTTACGGATTTTGGACGTTTGAACGCCATAATTCTCAGCTGAATTGGGACGCACAAATTAGCCAGGCACCTG
GTAGGAGGGATCCTTATGATGATATGCTTCAGGACATCAACAATAACTCCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTCGTCATGGAGTTTGCTGAGAATTTGGTATTAAGACTTATGGAGGATCCTAAAGAGAGGGATCGCAAATTCAGAGAGCACGTTTACGCGGTCAAGGATCGGTG
CCAAAAGACGAAGGAGATGTGGAGTTATCCTCTCCGTCCTTACGGATTTTGGACGTTTGAACGCCATAATTCTCAGCTGAATTGGGACGCACAAATTAGCCAGGCACCTG
GTAGGAGGGATCCTTATGATGATATGCTTCAGGACATCAACAATAACTCCAAGTGA
Protein sequenceShow/hide protein sequence
MKFVMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPLRPYGFWTFERHNSQLNWDAQISQAPGRRDPYDDMLQDINNNSK