; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G006830 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G006830
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationchr04:6266236..6267920
RNA-Seq ExpressionLsi04G006830
SyntenyLsi04G006830
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK15728.1 chlorophyll a-b binding protein 7 [Cucumis melo var. makuwa]5.0e-14293.63Show/hide
Query:  MASACASSAIAAV----SQKNGCPK-ASNFLTGKKLRLRNLTAAAAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKITSDPE
        MASACASSAIAAV    S KNGCPK ASNFL GKKLRLRNL AAA VAPRSAPVCAAADP+RPLWFPGSTPPPWLDGSLPGDFGFDPLGL      SDPE
Subjt:  MASACASSAIAAV----SQKNGCPK-ASNFLTGKKLRLRNLTAAAAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKITSDPE

Query:  SLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPG
        SLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWY+AGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPG
Subjt:  SLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPG

Query:  GLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
        GLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
Subjt:  GLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA

XP_008446036.1 PREDICTED: chlorophyll a-b binding protein 7, chloroplastic [Cucumis melo]8.6e-14292.94Show/hide
Query:  MASACASSAIAAV------SQKNGCPK-ASNFLTGKKLRLRNLTAAAAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKITSD
        MASACASSAIAAV      S KNGCPK ASNFL GKKLRLRNL AAA VAPRSAPVCAAADP+RPLWFPGSTPPPWLDGSLPGDFGFDPLGL      SD
Subjt:  MASACASSAIAAV------SQKNGCPK-ASNFLTGKKLRLRNLTAAAAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKITSD

Query:  PESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGY
        PESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWY+AGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGY
Subjt:  PESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGY

Query:  PGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
        PGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
Subjt:  PGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA

XP_022957420.1 chlorophyll a-b binding protein 7, chloroplastic [Cucurbita moschata]5.0e-14293.28Show/hide
Query:  MASACASSAIAAV------SQKNGCPKASNFLTGKKLRLRNLTAAAAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKITSDP
        MASACASSAIAAV      SQKNGCPK SNFLTGK+LRLR  T AAAVAPRSAPVCAAADP+RPLWFPGSTPPPWLDGSLPGDFGFDPLGL     +SDP
Subjt:  MASACASSAIAAV------SQKNGCPKASNFLTGKKLRLRNLTAAAAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKITSDP

Query:  ESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYP
        ESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYP
Subjt:  ESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYP

Query:  GGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
        GGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
Subjt:  GGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA

XP_023541134.1 chlorophyll a-b binding protein 7, chloroplastic-like [Cucurbita pepo subsp. pepo]5.0e-14292.91Show/hide
Query:  MASACASSAIAAV------SQKNGCPKASNFLTGKKLRLRNLTAAAAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKITSDP
        MASACASSAIA V      SQKNGCPKASNF+TGKKLRLR  T  AAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGL     +SDP
Subjt:  MASACASSAIAAV------SQKNGCPKASNFLTGKKLRLRNLTAAAAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKITSDP

Query:  ESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYP
        ESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLF+VELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYP
Subjt:  ESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYP

Query:  GGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
        GGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
Subjt:  GGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA

XP_038892923.1 chlorophyll a-b binding protein 7, chloroplastic [Benincasa hispida]1.6e-14393.63Show/hide
Query:  ASACASSAIAAV------SQKNGCPKASNFLTGKKLRLRNLTAAAAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKITSDPE
        +SACASSAIAAV      SQKNGCPKASNFLTGKKLRLRNLTAA AVAPRS PVCAAADP+RPLWFPGSTPPPWLDGSLPGDFGFDPLGL      SDPE
Subjt:  ASACASSAIAAV------SQKNGCPKASNFLTGKKLRLRNLTAAAAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKITSDPE

Query:  SLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPG
        SLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWY+AGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPG
Subjt:  SLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPG

Query:  GLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
        GLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
Subjt:  GLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA

TrEMBL top hitse value%identityAlignment
A0A1S3BDM5 Chlorophyll a-b binding protein, chloroplastic4.1e-14292.94Show/hide
Query:  MASACASSAIAAV------SQKNGCPK-ASNFLTGKKLRLRNLTAAAAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKITSD
        MASACASSAIAAV      S KNGCPK ASNFL GKKLRLRNL AAA VAPRSAPVCAAADP+RPLWFPGSTPPPWLDGSLPGDFGFDPLGL      SD
Subjt:  MASACASSAIAAV------SQKNGCPK-ASNFLTGKKLRLRNLTAAAAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKITSD

Query:  PESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGY
        PESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWY+AGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGY
Subjt:  PESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGY

Query:  PGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
        PGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
Subjt:  PGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA

A0A5D3CWU8 Chlorophyll a-b binding protein, chloroplastic2.4e-14293.63Show/hide
Query:  MASACASSAIAAV----SQKNGCPK-ASNFLTGKKLRLRNLTAAAAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKITSDPE
        MASACASSAIAAV    S KNGCPK ASNFL GKKLRLRNL AAA VAPRSAPVCAAADP+RPLWFPGSTPPPWLDGSLPGDFGFDPLGL      SDPE
Subjt:  MASACASSAIAAV----SQKNGCPK-ASNFLTGKKLRLRNLTAAAAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKITSDPE

Query:  SLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPG
        SLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWY+AGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPG
Subjt:  SLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPG

Query:  GLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
        GLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
Subjt:  GLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA

A0A6J1H0H5 Chlorophyll a-b binding protein, chloroplastic2.4e-14293.28Show/hide
Query:  MASACASSAIAAV------SQKNGCPKASNFLTGKKLRLRNLTAAAAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKITSDP
        MASACASSAIAAV      SQKNGCPK SNFLTGK+LRLR  T AAAVAPRSAPVCAAADP+RPLWFPGSTPPPWLDGSLPGDFGFDPLGL     +SDP
Subjt:  MASACASSAIAAV------SQKNGCPKASNFLTGKKLRLRNLTAAAAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKITSDP

Query:  ESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYP
        ESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYP
Subjt:  ESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYP

Query:  GGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
        GGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
Subjt:  GGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA

A0A6J1HNZ1 Chlorophyll a-b binding protein, chloroplastic7.1e-14292.54Show/hide
Query:  MASACASSAIAAV------SQKNGCPKASNFLTGKKLRLRNLTAAAAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKITSDP
        MASACASSAIA V      SQKNGCPKASNF+TGKKLRLR  T   AVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGL     +SDP
Subjt:  MASACASSAIAAV------SQKNGCPKASNFLTGKKLRLRNLTAAAAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKITSDP

Query:  ESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYP
        ESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLF+VELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYP
Subjt:  ESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYP

Query:  GGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
        GGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
Subjt:  GGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA

A0A6J1KAB5 Chlorophyll a-b binding protein, chloroplastic2.4e-14293.28Show/hide
Query:  MASACASSAIAAV------SQKNGCPKASNFLTGKKLRLRNLTAAAAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKITSDP
        MASACASSAIAAV      SQKNGCPK SNFLTGK+LRLR  T AAAVAPRSAPVCAAADP+RPLWFPGSTPPPWLDGSLPGDFGFDPLGL     +SDP
Subjt:  MASACASSAIAAV------SQKNGCPKASNFLTGKKLRLRNLTAAAAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKITSDP

Query:  ESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYP
        ESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYP
Subjt:  ESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYP

Query:  GGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
        GGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
Subjt:  GGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA

SwissProt top hitse value%identityAlignment
P10708 Chlorophyll a-b binding protein 7, chloroplastic3.1e-12681.18Show/hide
Query:  MASACASSAIAAV------SQKNGC---PKASNFLTGKKLRLRNLTAAAAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKIT
        MASACASS IAAV      S++NG       ++FL G++LR+    +    A  +  VC AADP+RPLWFPGSTPPPWLDGSLPGDFGFDPLGL      
Subjt:  MASACASSAIAAV------SQKNGC---PKASNFLTGKKLRLRNLTAAAAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKIT

Query:  SDPESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDV
        SDPESLRWNQQAELVHCRWAMLGAAGIFIPE LTKIGILNTPSWYTAGE EYFTDTTTLFIVEL+ IGWAEGRRWADI+KPGCVNTDPIFPNNKLTGTDV
Subjt:  SDPESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDV

Query:  GYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
        GYPGGLWFDPLGWGSGSP KIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHAT+FA
Subjt:  GYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA

P13869 Chlorophyll a-b binding protein, chloroplastic9.9e-12582.05Show/hide
Query:  MASACASSAIAAV------SQKN----GCPKASNFLTGKKLRLRNLTAAAAVAPRSAPVCA-AADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLK
        MASACASS IAAV      SQKN    G  KAS FL GK+LR+      A V  RS  V A AADP+RPLWFPGSTPP WLDGSLPGDFGFDPLGLG   
Subjt:  MASACASSAIAAV------SQKN----GCPKASNFLTGKKLRLRNLTAAAAVAPRSAPVCA-AADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLK

Query:  ITSDPESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGT
          SDPESL+WN QAELVH RWAMLGAAGIFIPEFLTKIG+LNTPSWYTAGE EYFTDTTTLF++EL+ IGWAEGRRWADI+KPGCVNTDPIFPNNKLTGT
Subjt:  ITSDPESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGT

Query:  DVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
        DVGYPGGLWFDPLGWGSGSP KIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHAT+FA
Subjt:  DVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA

P27521 Chlorophyll a-b binding protein 4, chloroplastic2.0e-5645.6Show/hide
Query:  AAVSQKNGCPKASNFLTGKKLRLRNLTAAAAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKITSDPESLRWNQQAELVHCRW
        A+ S    C     FLTG   RL    +  ++   +       +  +  W PG   P +L GSL GD GFDPLGL +     DPE+L+W  QAELV+ RW
Subjt:  AAVSQKNGCPKASNFLTGKKLRLRNLTAAAAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKITSDPESLRWNQQAELVHCRW

Query:  AMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPE
        AMLG AG+ +PE  TKIGI+N P WY AG+ +YF  ++TLF++E I   + E RRW DI  PG VN DPIF    L   +VGYPGG+ F+PL +      
Subjt:  AMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPE

Query:  KIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATV
          +E + KE+ NGRLAMLA +G   QH  TG GP +NL  HL+DP H T+
Subjt:  KIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATV

Q8LCQ4 Photosystem I chlorophyll a/b-binding protein 6, chloroplastic3.3e-8058.09Show/hide
Query:  ASNFLTGKKLRLRNLTAAAAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKITSDPESLRWNQQAELVHCRWAMLGAAGIFIP
        AS   TG +L    L    A     + VC    P+RPLWFPGS+PP WLDGSLPGDFGFDPLGLG     SDP++L+W  QAEL+H RWAML   GI IP
Subjt:  ASNFLTGKKLRLRNLTAAAAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKITSDPESLRWNQQAELVHCRWAMLGAAGIFIP

Query:  EFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIK
        E L ++G +   SWY AG  EYF D+TTLF+ +++ +GWAEGRRWAD++KPG V+ +P +P+      DVGYPGGLWFD + WG GSPE +  LRTKEIK
Subjt:  EFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIK

Query:  NGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
        NGRLAMLA +G  FQ  YT   PI+NL AHLADPGH  VF+
Subjt:  NGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA

Q9SYW8 Photosystem I chlorophyll a/b-binding protein 2, chloroplastic4.6e-12280.15Show/hide
Query:  ASACASSAIAAVSQKNGCPKASNFLTGKKLRL-RNLTAAAAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKITSDPESLRWN
        +S CASSAIAA+S       + +FL GKKLRL + LT  A   P ++    AADP+RP+WFPGSTPP WLDGSLPGDFGFDPLGL     +SDP+SL+WN
Subjt:  ASACASSAIAAVSQKNGCPKASNFLTGKKLRL-RNLTAAAAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKITSDPESLRWN

Query:  QQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFD
         QAE+VHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGE EYFTD TTLF+VELI IGWAEGRRWADI+KPG VNTDP+FPNNKLTGTDVGYPGGLWFD
Subjt:  QQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFD

Query:  PLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
        PLGWGSGSP K+KELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHAT+FA
Subjt:  PLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA

Arabidopsis top hitse value%identityAlignment
AT1G19150.1 photosystem I light harvesting complex gene 62.4e-8158.09Show/hide
Query:  ASNFLTGKKLRLRNLTAAAAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKITSDPESLRWNQQAELVHCRWAMLGAAGIFIP
        AS   TG +L    L    A     + VC    P+RPLWFPGS+PP WLDGSLPGDFGFDPLGLG     SDP++L+W  QAEL+H RWAML   GI IP
Subjt:  ASNFLTGKKLRLRNLTAAAAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKITSDPESLRWNQQAELVHCRWAMLGAAGIFIP

Query:  EFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIK
        E L ++G +   SWY AG  EYF D+TTLF+ +++ +GWAEGRRWAD++KPG V+ +P +P+      DVGYPGGLWFD + WG GSPE +  LRTKEIK
Subjt:  EFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIK

Query:  NGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
        NGRLAMLA +G  FQ  YT   PI+NL AHLADPGH  VF+
Subjt:  NGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA

AT1G45474.1 photosystem I light harvesting complex gene 51.7e-5046.95Show/hide
Query:  RPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKITSDPESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEY-FTDTTTLFIVEL
        R  W PG  PPP+LDG+L GD+GFDPLGLG+     DPESL+W  QAELVH R+AMLG AGI   + L   GI N P WY AG +++ F  T TL +V+ 
Subjt:  RPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKITSDPESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEY-FTDTTTLFIVEL

Query:  IFIGWAEGRRWADILKPGCVNTDPIF---PNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHL
        + +G+AE +R+ D + PG    +  F       L G + GYPGG   +PLG      +   + + KEIKNGRLAM+A++G + Q   T TGPIDNL  HL
Subjt:  IFIGWAEGRRWADILKPGCVNTDPIF---PNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHL

Query:  ADPGHATVFAVSF
        ++P H T+    F
Subjt:  ADPGHATVFAVSF

AT3G47470.1 light-harvesting chlorophyll-protein complex I subunit A41.4e-5745.6Show/hide
Query:  AAVSQKNGCPKASNFLTGKKLRLRNLTAAAAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKITSDPESLRWNQQAELVHCRW
        A+ S    C     FLTG   RL    +  ++   +       +  +  W PG   P +L GSL GD GFDPLGL +     DPE+L+W  QAELV+ RW
Subjt:  AAVSQKNGCPKASNFLTGKKLRLRNLTAAAAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKITSDPESLRWNQQAELVHCRW

Query:  AMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPE
        AMLG AG+ +PE  TKIGI+N P WY AG+ +YF  ++TLF++E I   + E RRW DI  PG VN DPIF    L   +VGYPGG+ F+PL +      
Subjt:  AMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPE

Query:  KIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATV
          +E + KE+ NGRLAMLA +G   QH  TG GP +NL  HL+DP H T+
Subjt:  KIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATV

AT3G61470.1 photosystem I light harvesting complex gene 23.3e-12380.15Show/hide
Query:  ASACASSAIAAVSQKNGCPKASNFLTGKKLRL-RNLTAAAAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKITSDPESLRWN
        +S CASSAIAA+S       + +FL GKKLRL + LT  A   P ++    AADP+RP+WFPGSTPP WLDGSLPGDFGFDPLGL     +SDP+SL+WN
Subjt:  ASACASSAIAAVSQKNGCPKASNFLTGKKLRL-RNLTAAAAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKITSDPESLRWN

Query:  QQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFD
         QAE+VHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGE EYFTD TTLF+VELI IGWAEGRRWADI+KPG VNTDP+FPNNKLTGTDVGYPGGLWFD
Subjt:  QQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFD

Query:  PLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
        PLGWGSGSP K+KELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHAT+FA
Subjt:  PLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA

AT5G28450.1 Chlorophyll A-B binding family protein1.4e-5291.84Show/hide
Query:  RWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA
        R  DI+KPG VNTDP+FPNNKLTGTD+GYPGGLWFDPLGWGSGSP KIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHAT+FA
Subjt:  RWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTGCTTGTGCTTCTTCCGCCATTGCGGCTGTTTCCCAGAAAAATGGGTGCCCTAAGGCTTCTAATTTCCTTACCGGCAAGAAGCTGAGGCTGAGAAACTTAAC
TGCAGCCGCTGCCGTTGCTCCTCGATCAGCTCCGGTATGCGCCGCAGCTGACCCCAACAGACCGCTCTGGTTCCCTGGCAGCACCCCTCCTCCATGGCTCGACGGCAGCC
TTCCCGGCGACTTTGGCTTTGACCCTCTTGGTCTCGGTCAGTTGAAAATTACGTCTGATCCGGAGAGTCTGAGATGGAACCAGCAGGCGGAGCTGGTTCATTGCCGATGG
GCAATGTTGGGGGCGGCCGGAATTTTCATCCCGGAATTCTTGACAAAGATCGGAATATTGAACACTCCGTCGTGGTACACCGCCGGTGAATTGGAATACTTCACCGACAC
AACCACTCTGTTCATCGTGGAACTCATTTTCATTGGTTGGGCTGAGGGTAGACGGTGGGCCGACATCCTCAAACCCGGTTGCGTCAACACCGACCCGATTTTCCCTAACA
ACAAGCTGACCGGAACCGACGTCGGGTACCCGGGCGGGCTTTGGTTCGACCCACTCGGGTGGGGCAGCGGGTCACCCGAAAAGATAAAGGAATTGAGAACGAAAGAGATA
AAGAACGGGCGATTGGCTATGTTGGCGGTGATGGGAGCTTGGTTCCAACACATTTACACCGGCACCGGTCCCATTGACAACCTTTTCGCTCACCTTGCCGATCCCGGCCA
CGCCACTGTTTTCGCCGTGAGTTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTGCTTGTGCTTCTTCCGCCATTGCGGCTGTTTCCCAGAAAAATGGGTGCCCTAAGGCTTCTAATTTCCTTACCGGCAAGAAGCTGAGGCTGAGAAACTTAAC
TGCAGCCGCTGCCGTTGCTCCTCGATCAGCTCCGGTATGCGCCGCAGCTGACCCCAACAGACCGCTCTGGTTCCCTGGCAGCACCCCTCCTCCATGGCTCGACGGCAGCC
TTCCCGGCGACTTTGGCTTTGACCCTCTTGGTCTCGGTCAGTTGAAAATTACGTCTGATCCGGAGAGTCTGAGATGGAACCAGCAGGCGGAGCTGGTTCATTGCCGATGG
GCAATGTTGGGGGCGGCCGGAATTTTCATCCCGGAATTCTTGACAAAGATCGGAATATTGAACACTCCGTCGTGGTACACCGCCGGTGAATTGGAATACTTCACCGACAC
AACCACTCTGTTCATCGTGGAACTCATTTTCATTGGTTGGGCTGAGGGTAGACGGTGGGCCGACATCCTCAAACCCGGTTGCGTCAACACCGACCCGATTTTCCCTAACA
ACAAGCTGACCGGAACCGACGTCGGGTACCCGGGCGGGCTTTGGTTCGACCCACTCGGGTGGGGCAGCGGGTCACCCGAAAAGATAAAGGAATTGAGAACGAAAGAGATA
AAGAACGGGCGATTGGCTATGTTGGCGGTGATGGGAGCTTGGTTCCAACACATTTACACCGGCACCGGTCCCATTGACAACCTTTTCGCTCACCTTGCCGATCCCGGCCA
CGCCACTGTTTTCGCCGTGAGTTTTTAA
Protein sequenceShow/hide protein sequence
MASACASSAIAAVSQKNGCPKASNFLTGKKLRLRNLTAAAAVAPRSAPVCAAADPNRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGQLKITSDPESLRWNQQAELVHCRW
AMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEI
KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAVSF