; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G006940 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G006940
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein FAM136A
Genome locationchr04:6342766..6344911
RNA-Seq ExpressionLsi04G006940
SyntenyLsi04G006940
Gene Ontology termsGO:0005737 - cytoplasm (cellular component)
InterPro domainsIPR008560 - Protein of unknown function DUF842, eukaryotic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135332.1 protein FAM136A [Cucumis sativus]7.1e-7597.97Show/hide
Query:  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQ
        MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRR+QEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQ
Subjt:  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQ

Query:  DKFEAARLQQKTGSVYDLESCVDASIQESLNTLPHLANKLKASFNISN
        DKFEAARLQQKTGSVYDLESCVDASIQES+NTLPHLANKLKASFNI+N
Subjt:  DKFEAARLQQKTGSVYDLESCVDASIQESLNTLPHLANKLKASFNISN

XP_008446025.1 PREDICTED: protein FAM136A [Cucumis melo]6.0e-7497.3Show/hide
Query:  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQ
        MNHIAAMEEQVVSERMRQKLNEVN AAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRR+QEEISNCVENCSVPVVKAQQHVENEM+KFQERLNRSLMVCQ
Subjt:  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQ

Query:  DKFEAARLQQKTGSVYDLESCVDASIQESLNTLPHLANKLKASFNISN
        DKFEAARLQQKTGSVYDLESCVDASIQESLNTLPHLANKLKASFNI N
Subjt:  DKFEAARLQQKTGSVYDLESCVDASIQESLNTLPHLANKLKASFNISN

XP_022151759.1 protein FAM136A [Momordica charantia]1.9e-7295.21Show/hide
Query:  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQ
        MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGP+QDHVNF+LQQAYFKCAYECFDRRR+QEEISNCVENCSVPV+KAQQHVENEMAKFQERLNRSLMVCQ
Subjt:  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQ

Query:  DKFEAARLQQKTGSVYDLESCVDASIQESLNTLPHLANKLKASFNI
        DKFEAARLQQKTGSVYDLESCVD SIQESLNTLPHLA+KL+ASFNI
Subjt:  DKFEAARLQQKTGSVYDLESCVDASIQESLNTLPHLANKLKASFNI

XP_022945251.1 protein FAM136A-like [Cucurbita moschata]9.6e-7294.59Show/hide
Query:  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQ
        MNHIAAMEEQVVSERMRQKLNEVNMAAQ+ LGPIQDHVNF+LQQAYFKCAYECFDRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQ
Subjt:  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQ

Query:  DKFEAARLQQKTGSVYDLESCVDASIQESLNTLPHLANKLKASFNISN
        DKFEAA+LQQKT SVY+LESCVD+SIQESLNTLPHLANKLKASFNI N
Subjt:  DKFEAARLQQKTGSVYDLESCVDASIQESLNTLPHLANKLKASFNISN

XP_038893078.1 protein FAM136A-like [Benincasa hispida]1.9e-7599.32Show/hide
Query:  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQ
        MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRR+QEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQ
Subjt:  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQ

Query:  DKFEAARLQQKTGSVYDLESCVDASIQESLNTLPHLANKLKASFNISN
        DKFEAARLQQKTGSVYDLESCVDASIQESLNTLPHLANKLKASFNISN
Subjt:  DKFEAARLQQKTGSVYDLESCVDASIQESLNTLPHLANKLKASFNISN

TrEMBL top hitse value%identityAlignment
A0A0A0KV92 Uncharacterized protein3.4e-7597.97Show/hide
Query:  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQ
        MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRR+QEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQ
Subjt:  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQ

Query:  DKFEAARLQQKTGSVYDLESCVDASIQESLNTLPHLANKLKASFNISN
        DKFEAARLQQKTGSVYDLESCVDASIQES+NTLPHLANKLKASFNI+N
Subjt:  DKFEAARLQQKTGSVYDLESCVDASIQESLNTLPHLANKLKASFNISN

A0A1S3BE24 protein FAM136A2.9e-7497.3Show/hide
Query:  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQ
        MNHIAAMEEQVVSERMRQKLNEVN AAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRR+QEEISNCVENCSVPVVKAQQHVENEM+KFQERLNRSLMVCQ
Subjt:  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQ

Query:  DKFEAARLQQKTGSVYDLESCVDASIQESLNTLPHLANKLKASFNISN
        DKFEAARLQQKTGSVYDLESCVDASIQESLNTLPHLANKLKASFNI N
Subjt:  DKFEAARLQQKTGSVYDLESCVDASIQESLNTLPHLANKLKASFNISN

A0A5D3CZ60 Protein FAM136A2.9e-7497.3Show/hide
Query:  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQ
        MNHIAAMEEQVVSERMRQKLNEVN AAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRR+QEEISNCVENCSVPVVKAQQHVENEM+KFQERLNRSLMVCQ
Subjt:  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQ

Query:  DKFEAARLQQKTGSVYDLESCVDASIQESLNTLPHLANKLKASFNISN
        DKFEAARLQQKTGSVYDLESCVDASIQESLNTLPHLANKLKASFNI N
Subjt:  DKFEAARLQQKTGSVYDLESCVDASIQESLNTLPHLANKLKASFNISN

A0A6J1DE11 protein FAM136A9.4e-7395.21Show/hide
Query:  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQ
        MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGP+QDHVNF+LQQAYFKCAYECFDRRR+QEEISNCVENCSVPV+KAQQHVENEMAKFQERLNRSLMVCQ
Subjt:  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQ

Query:  DKFEAARLQQKTGSVYDLESCVDASIQESLNTLPHLANKLKASFNI
        DKFEAARLQQKTGSVYDLESCVD SIQESLNTLPHLA+KL+ASFNI
Subjt:  DKFEAARLQQKTGSVYDLESCVDASIQESLNTLPHLANKLKASFNI

A0A6J1HSM6 protein FAM136A-like4.7e-7294.59Show/hide
Query:  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQ
        MNHIAAMEEQVVSERMRQKLNEVNMAAQ+ LGPIQDHVNF+LQQAYFKCAYECFDRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQ
Subjt:  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQ

Query:  DKFEAARLQQKTGSVYDLESCVDASIQESLNTLPHLANKLKASFNISN
        DKFEAA+LQQKT SVY+LESCVD+SIQESLNTLPHLANKLKASFNI N
Subjt:  DKFEAARLQQKTGSVYDLESCVDASIQESLNTLPHLANKLKASFNISN

SwissProt top hitse value%identityAlignment
A4QNC6 Protein FAM136A4.1e-0932.38Show/hide
Query:  LQQAYFKCAYECF-DRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDK----FEAARLQQKTGSVYDLESCVDASIQESLNTLPHL
        +Q   F+C+ +C  D     +++ +C+E C  P+ +AQ  V NE+ +FQ RL R  M C DK    F++   + +  +   LE CV    +E +N +P +
Subjt:  LQQAYFKCAYECF-DRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDK----FEAARLQQKTGSVYDLESCVDASIQESLNTLPHL

Query:  ANKLK
          KLK
Subjt:  ANKLK

Q2HJI3 Protein FAM136A2.1e-0830.91Show/hide
Query:  LQQAYFKCAYECFDR-RRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAARLQQKTGS-----VYDLESCVDASIQESLNTLPH
        +Q   F+C+  C +  +   +++  C+E C  P+ +AQ  V +E+ KFQ+RL R  M C DK   A+     GS        LE+CV   + + +N +P 
Subjt:  LQQAYFKCAYECFDR-RRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAARLQQKTGS-----VYDLESCVDASIQESLNTLPH

Query:  LANKLKASFN
        +  K+K S +
Subjt:  LANKLKASFN

Q63ZH8 Protein FAM136A2.7e-0827.78Show/hide
Query:  NEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECF-DRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDK----FEAARLQQKTGSV
        N +  A  S +  ++      +Q   F+C+ +C  D     +++ +C+E C  P+ +AQ  V  E+ +FQ RL+R  M C D+    F++   + +  + 
Subjt:  NEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECF-DRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDK----FEAARLQQKTGSV

Query:  YDLESCVDASIQESLNTLPHLANKLK
          LE CV    +E +N +P +  KLK
Subjt:  YDLESCVDASIQESLNTLPHLANKLK

Q6PBU0 Protein FAM136A2.9e-1031.9Show/hide
Query:  QDHVNFSLQQAYFKCAYECFDR-RRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDK----FEAARLQQKTGSVYDLESCVDASIQES
        ++H+   +Q   F+C+ EC +       ++  C+E C  P+ KAQ  V +E+ +FQ+RL+R  M C DK    F++   +    ++ D   CV + + E 
Subjt:  QDHVNFSLQQAYFKCAYECFDR-RRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDK----FEAARLQQKTGSVYDLESCVDASIQES

Query:  LNTLPHLANKLKASFN
        LN LP +  +LK S N
Subjt:  LNTLPHLANKLKASFN

Q96C01 Protein FAM136A1.6e-0829.37Show/hide
Query:  VNMAAQSHLGPIQDHVNFSLQQAYFKCAYECF-DRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFE------AARLQQKTGSV
        V  A +S +  ++      +Q   F+C+  C  D +   +++  C+E C VP+ +AQ  V +E+ KFQ+RL R  M C DK +      +  LQ K    
Subjt:  VNMAAQSHLGPIQDHVNFSLQQAYFKCAYECF-DRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFE------AARLQQKTGSV

Query:  YDLESCVDASIQESLNTLPHLANKLK
          L+SCV   + + ++ +P +  K+K
Subjt:  YDLESCVDASIQESLNTLPHLANKLK

Arabidopsis top hitse value%identityAlignment
AT1G05730.1 Eukaryotic protein of unknown function (DUF842)1.8e-5568.46Show/hide
Query:  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQ
        M+HIAA EEQ+V+ER+R+KL EVN  AQS L PIQDH+NF+LQQAYFKCAYECFDR RKQEEI+NCVE+CSVPVV AQQH E EM++FQER+NRSLMVCQ
Subjt:  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQ

Query:  DKFEAARLQQKTG-SVYDLESCVDASIQESLNTLPHLANKLKASFNISN
        DKFEAA+L +  G +   +ESCV+ SI++SL+TLPH+  ++K SF+I++
Subjt:  DKFEAARLQQKTG-SVYDLESCVDASIQESLNTLPHLANKLKASFNISN

AT1G05740.1 Eukaryotic protein of unknown function (DUF842)2.2e-3452.21Show/hide
Query:  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFS-----------LQQAYFKCAYECFDRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQ
        M+ +A  EEQ++ ER+R+K+ EVN + QS L PIQ+H++F+           LQQAYFKC+ ECF++RRK E  +NCVE C VPV K+QQ  +++MAKFQ
Subjt:  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFS-----------LQQAYFKCAYECFDRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQ

Query:  ERLNRSLMVCQDKFEAARL--QQKTGSVYDLESCVD
        +R+NRSLMVCQDKFEAA+L    +  +  D+E CV+
Subjt:  ERLNRSLMVCQDKFEAARL--QQKTGSVYDLESCVD

AT2G31725.1 Eukaryotic protein of unknown function (DUF842)4.5e-5972.48Show/hide
Query:  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQ
        M+HIAA EEQ+VSER+R+KL EVN+AAQ+ L PIQDH+NF+LQQAYFKCAYECFDRRRKQEEISNCVE+CSVPVVK+QQ+ ENEMA+FQERLNRSL+VCQ
Subjt:  MNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQ

Query:  DKFEAARLQQ-KTGSVYDLESCVDASIQESLNTLPHLANKLKASFNISN
        DKFEA++LQ+ +  +V ++ESCV  SI+E+LNTLPH+  ++K +FNI+N
Subjt:  DKFEAARLQQ-KTGSVYDLESCVDASIQESLNTLPHLANKLKASFNISN

AT2G43720.1 Eukaryotic protein of unknown function (DUF842)4.5e-4358.74Show/hide
Query:  EEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAAR
        EE++V ER+R+K+NEV+ A+QS L P+QDH+NF+LQ+AYFKCAYECFDR R   EIS C E+CSVP+  AQ + +NEM+ FQERLNRSL+VCQDKFE A+
Subjt:  EEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMVCQDKFEAAR

Query:  LQQKTGS--VYDLESCVDASIQESLNTLPHLANKLKASFNISN
         QQKT S  V DLE CV+ ++ E++ TLP+L +++K + +I++
Subjt:  LQQKTGS--VYDLESCVDASIQESLNTLPHLANKLKASFNISN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATTTTCTCTGTTTCGGGGAATTTGGAAGGAAGAAGATGAATCACATAGCAGCAATGGAAGAGCAAGTAGTTTCTGAGAGAATGAGGCAAAAGCTTAACGAAGTGAACAT
GGCTGCGCAATCTCATCTTGGTCCTATTCAAGACCATGTCAATTTTTCCCTTCAGCAAGCATATTTCAAATGTGCATATGAGTGTTTCGACAGAAGAAGAAAACAGGAAG
AGATTAGTAACTGCGTTGAGAACTGTAGTGTTCCAGTTGTTAAAGCCCAGCAACATGTTGAGAATGAAATGGCTAAGTTTCAAGAAAGATTGAACAGATCACTAATGGTG
TGCCAGGACAAGTTCGAAGCAGCCAGGCTTCAGCAGAAAACTGGGAGTGTATATGATTTGGAGTCGTGTGTGGATGCATCAATACAAGAAAGCTTGAATACATTGCCACA
TTTAGCTAATAAATTAAAAGCTTCCTTCAATATCAGCAATTAA
mRNA sequenceShow/hide mRNA sequence
GATTTTCTCTGTTTCGGGGAATTTGGAAGGAAGAAGATGAATCACATAGCAGCAATGGAAGAGCAAGTAGTTTCTGAGAGAATGAGGCAAAAGCTTAACGAAGTGAACAT
GGCTGCGCAATCTCATCTTGGTCCTATTCAAGACCATGTCAATTTTTCCCTTCAGCAAGCATATTTCAAATGTGCATATGAGTGTTTCGACAGAAGAAGAAAACAGGAAG
AGATTAGTAACTGCGTTGAGAACTGTAGTGTTCCAGTTGTTAAAGCCCAGCAACATGTTGAGAATGAAATGGCTAAGTTTCAAGAAAGATTGAACAGATCACTAATGGTG
TGCCAGGACAAGTTCGAAGCAGCCAGGCTTCAGCAGAAAACTGGGAGTGTATATGATTTGGAGTCGTGTGTGGATGCATCAATACAAGAAAGCTTGAATACATTGCCACA
TTTAGCTAATAAATTAAAAGCTTCCTTCAATATCAGCAATTAA
Protein sequenceShow/hide protein sequence
DFLCFGEFGRKKMNHIAAMEEQVVSERMRQKLNEVNMAAQSHLGPIQDHVNFSLQQAYFKCAYECFDRRRKQEEISNCVENCSVPVVKAQQHVENEMAKFQERLNRSLMV
CQDKFEAARLQQKTGSVYDLESCVDASIQESLNTLPHLANKLKASFNISN