CuGenDBv2

Gene ID	Lsi04G007530
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Nuclear pore complex protein NUP214
Genome location	chr04:7010896..7012794
RNA-Seq Expression	Lsi04G007530
Synteny	Lsi04G007530
Gene Ontology terms	GO:0006405 - RNA export from nucleus (biological process) GO:0009793 - embryo development ending in seed dormancy (biological process) GO:0010070 - zygote asymmetric cell division (biological process) GO:0017056 - structural constituent of nuclear pore (molecular function)
InterPro domains	IPR044694 - Nuclear pore complex protein NUP214

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TYK15805.1 nuclear pore complex protein NUP214 [Cucumis melo var. makuwa]

6.4e-236

78.98

Show/hide

Query:  MWASPLQPSNTSRQKSQSLQKANATVPSPLSVFQSSHEMLKKSNNEAFSVISENKFT-----EKSKASDFFSVTRSDSVQKSNINLDQKSFIFTISSKQT
        MWAS LQPSNTSRQKS  LQK NAT PSP  VFQSSH+MLKK+NN A S  SENKFT     EKSKASDFFS TRSDSVQKS IN+DQKS IFTISSKQT
Subjt:  MWASPLQPSNTSRQKSQSLQKANATVPSPLSVFQSSHEMLKKSNNEAFSVISENKFT-----EKSKASDFFSVTRSDSVQKSNINLDQKSFIFTISSKQT

Query:  PTLKDSIDTSNSDNQKTANAKERHTTTSPLFGSADKPESASVGTMSSLVPTVDEARKIEEKRSLTTISPSVPAPALARLNTTSSSSTLFSGFAVSKPLPS
        P  +DSI TSN DNQKTAN KERHTTTS LFGSA+KPES  VGTM SLVPTVD ARK EEK+S+TTIS SV AP  A LNT+SS+STLFSGFAVSK LPS
Subjt:  PTLKDSIDTSNSDNQKTANAKERHTTTSPLFGSADKPESASVGTMSSLVPTVDEARKIEEKRSLTTISPSVPAPALARLNTTSSSSTLFSGFAVSKPLPS

Query:  S---AAVIDLNQPLSTSTQLNFSSPVVSISDSLFQAPKIVSTSPTLSSLNPSLEPLKKELPILKSDDDTEKQTPASKPESYELKFQPSVTPADKNHVEPT
        S   AAV+DLNQP STSTQLNF SPVVS S+SLFQAPK V TSPTLSSLNP++E  K EL +LKS+DD EKQT +SKP S+ELKFQPS+TPADKNHVEPT
Subjt:  S---AAVIDLNQPLSTSTQLNFSSPVVSISDSLFQAPKIVSTSPTLSSLNPSLEPLKKELPILKSDDDTEKQTPASKPESYELKFQPSVTPADKNHVEPT

Query:  SKTQTVAKDVGGQVPNVIGNAQPQQPSVAFA---SPNLTSKIFANGRNEASNTAVTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTPMSGAPKPNPFGG
        SKTQTV KDVGGQVPNV+G+AQ QQPSVAFA   S NLTSKIFAN RNE SN  VTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTP+SGAPKPNPFGG
Subjt:  SKTQTVAKDVGGQVPNVIGNAQPQQPSVAFA---SPNLTSKIFANGRNEASNTAVTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTPMSGAPKPNPFGG

Query:  PFGNVNATSMTSSFTMASPPSGELFRPASFSFQSPLASQAASQPTNSVAFSGGFGSAMATQAPSQGGFGQPAQIGVGQQALGNVLGSFGQSRQLGPSLPG
        PFGNVNA S+T+SF MASPPSGELFRPASFSFQSPLASQAASQPTNSVAFSG FGSA+ATQAP QGGFGQPAQIGVGQQALGNVLGSFGQSRQLGP+LPG
Subjt:  PFGNVNATSMTSSFTMASPPSGELFRPASFSFQSPLASQAASQPTNSVAFSGGFGSAMATQAPSQGGFGQPAQIGVGQQALGNVLGSFGQSRQLGPSLPG

Query:  TGTGSPGGFSGGFTSLKPVGVGGFAGAGSSVGSGGFAGVGSGGGGGFGGVGSGGGGFAGTVSTGGGFAGASSTTGGFAAAAGGGFVGAAGGGFAGAAGGG
        TG+GSPGGFSGGFT+ KPVGV            GGFAGVGSGGGGGFGGV    GGFAG  STGGGFAGASSTT                GGFAGAAGGG
Subjt:  TGTGSPGGFSGGFTSLKPVGVGGFAGAGSSVGSGGFAGVGSGGGGGFGGVGSGGGGFAGTVSTGGGFAGASSTTGGFAAAAGGGFVGAAGGGFAGAAGGG

Query:  FAGAAGGFGAFGSQQGS-GGFSAFG---AGGAGGTGKPPELFTQIRK
        F G AGGFGAFGSQQ S GGFSAFG   AGGA  TGKPPELFTQIRK
Subjt:  FAGAAGGFGAFGSQQGS-GGFSAFG---AGGAGGTGKPPELFTQIRK

XP_031741374.1 nuclear pore complex protein NUP214 isoform X1 [Cucumis sativus]

2.8e-239

78.83

Show/hide

Query:  MWASPLQPSNTSRQKSQSLQKANATVPSPLSVFQSSHEMLKKSNNEAFSVISENKFT-----EKSKASDFFSVTRSDSVQKSNINLDQKSFIFTISSKQT
        MW SPLQPSNTSRQKS  LQK N T PSP  VFQSSH+MLKK NNEA SV SENKFT     EKSKASDFFS TRSDSVQKSNIN+DQKS IFTISSKQ 
Subjt:  MWASPLQPSNTSRQKSQSLQKANATVPSPLSVFQSSHEMLKKSNNEAFSVISENKFT-----EKSKASDFFSVTRSDSVQKSNINLDQKSFIFTISSKQT

Query:  PTLKDSIDTSNSDNQKTANAKERHTTTSPLFGSADKPESASVGTMSSLVPTVDEARKIEEKRSLTTISPSVPAPALARLNTTSSSSTLFSGFAVSKPLPS
        PT  DSI TSN DNQKTAN KERHTTTSP FGSA+KPES  VG+M SLVPTVD +RK EEK+S+TTIS SV AP  A LNT+SS+STLFSGFAVSK LPS
Subjt:  PTLKDSIDTSNSDNQKTANAKERHTTTSPLFGSADKPESASVGTMSSLVPTVDEARKIEEKRSLTTISPSVPAPALARLNTTSSSSTLFSGFAVSKPLPS

Query:  SAAVIDLNQPLSTSTQLNFSSPVVSISDSLFQAPKIVSTSPTLSSLNPSLEPLKKELPILKSDDDTEKQTPASKPESYELKFQPSVTPADKNHVEPTSKT
        SAAVIDLNQP STSTQLNFSSPVVS S+SLFQAPKIV TSPTLSSLNP+LE  K EL + KS+DD E+Q  +SKP S+ELKFQPS+TPADKNHVEPTSKT
Subjt:  SAAVIDLNQPLSTSTQLNFSSPVVSISDSLFQAPKIVSTSPTLSSLNPSLEPLKKELPILKSDDDTEKQTPASKPESYELKFQPSVTPADKNHVEPTSKT

Query:  QTVAKDVGGQVPNVIGNAQPQQPSVAFA---SPNLTSKIFANGRNEASNTAVTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTPMSGAPKPNPFGGPFG
        QTV KDVGGQ  NV+GNAQPQQPSVAFA   SPNLTSKIFAN RNE SN  VTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTP+SG PKPNPFGGPFG
Subjt:  QTVAKDVGGQVPNVIGNAQPQQPSVAFA---SPNLTSKIFANGRNEASNTAVTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTPMSGAPKPNPFGGPFG

Query:  NVNATSMTSSFTMASPPSGELFRPASFSFQSPLASQAASQPTNSVAFSGGFGSAMATQAPSQGGFGQPAQIGVGQQALGNVLGSFGQSRQLGPSLPGTGT
        NVNA SMTSSF MASPPSGELFRPASFSFQSPLASQAASQPTNSVAFSG FGSA+ TQ PSQGGFGQP+QIGVGQQALGNVLGSFGQSRQLGP++ GTG+
Subjt:  NVNATSMTSSFTMASPPSGELFRPASFSFQSPLASQAASQPTNSVAFSGGFGSAMATQAPSQGGFGQPAQIGVGQQALGNVLGSFGQSRQLGPSLPGTGT

Query:  GSPGGFSGGFTSLKPVGVGGFAGAGSSVGSGGFAGVGSGGGGGFGGVGSGGGGFAGTVSTGGGFAGASSTTGGFAAAAGGGFVGAAGGGFAGAAGGGFAG
        GSPGGFSGGFT+ KPVGV            GGFAGVGSGGGGGFGGV    GGFAG  STGGGFAGASST                 GGFAGAAGGGF G
Subjt:  GSPGGFSGGFTSLKPVGVGGFAGAGSSVGSGGFAGVGSGGGGGFGGVGSGGGGFAGTVSTGGGFAGASSTTGGFAAAAGGGFVGAAGGGFAGAAGGGFAG

Query:  AAGGFGAFGSQQGSGGFSAFG-------AGGAGGTGKPPELFTQIRK
         AGGFGAFGSQQ SGGFSAFG       AGGAG TGKPPELFTQIRK
Subjt:  AAGGFGAFGSQQGSGGFSAFG-------AGGAGGTGKPPELFTQIRK

XP_031741375.1 nuclear pore complex protein NUP214 isoform X2 [Cucumis sativus]

2.8e-239

78.83

Show/hide

Query:  MWASPLQPSNTSRQKSQSLQKANATVPSPLSVFQSSHEMLKKSNNEAFSVISENKFT-----EKSKASDFFSVTRSDSVQKSNINLDQKSFIFTISSKQT
        MW SPLQPSNTSRQKS  LQK N T PSP  VFQSSH+MLKK NNEA SV SENKFT     EKSKASDFFS TRSDSVQKSNIN+DQKS IFTISSKQ 
Subjt:  MWASPLQPSNTSRQKSQSLQKANATVPSPLSVFQSSHEMLKKSNNEAFSVISENKFT-----EKSKASDFFSVTRSDSVQKSNINLDQKSFIFTISSKQT

Query:  PTLKDSIDTSNSDNQKTANAKERHTTTSPLFGSADKPESASVGTMSSLVPTVDEARKIEEKRSLTTISPSVPAPALARLNTTSSSSTLFSGFAVSKPLPS
        PT  DSI TSN DNQKTAN KERHTTTSP FGSA+KPES  VG+M SLVPTVD +RK EEK+S+TTIS SV AP  A LNT+SS+STLFSGFAVSK LPS
Subjt:  PTLKDSIDTSNSDNQKTANAKERHTTTSPLFGSADKPESASVGTMSSLVPTVDEARKIEEKRSLTTISPSVPAPALARLNTTSSSSTLFSGFAVSKPLPS

Query:  SAAVIDLNQPLSTSTQLNFSSPVVSISDSLFQAPKIVSTSPTLSSLNPSLEPLKKELPILKSDDDTEKQTPASKPESYELKFQPSVTPADKNHVEPTSKT
        SAAVIDLNQP STSTQLNFSSPVVS S+SLFQAPKIV TSPTLSSLNP+LE  K EL + KS+DD E+Q  +SKP S+ELKFQPS+TPADKNHVEPTSKT
Subjt:  SAAVIDLNQPLSTSTQLNFSSPVVSISDSLFQAPKIVSTSPTLSSLNPSLEPLKKELPILKSDDDTEKQTPASKPESYELKFQPSVTPADKNHVEPTSKT

Query:  QTVAKDVGGQVPNVIGNAQPQQPSVAFA---SPNLTSKIFANGRNEASNTAVTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTPMSGAPKPNPFGGPFG
        QTV KDVGGQ  NV+GNAQPQQPSVAFA   SPNLTSKIFAN RNE SN  VTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTP+SG PKPNPFGGPFG
Subjt:  QTVAKDVGGQVPNVIGNAQPQQPSVAFA---SPNLTSKIFANGRNEASNTAVTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTPMSGAPKPNPFGGPFG

Query:  NVNATSMTSSFTMASPPSGELFRPASFSFQSPLASQAASQPTNSVAFSGGFGSAMATQAPSQGGFGQPAQIGVGQQALGNVLGSFGQSRQLGPSLPGTGT
        NVNA SMTSSF MASPPSGELFRPASFSFQSPLASQAASQPTNSVAFSG FGSA+ TQ PSQGGFGQP+QIGVGQQALGNVLGSFGQSRQLGP++ GTG+
Subjt:  NVNATSMTSSFTMASPPSGELFRPASFSFQSPLASQAASQPTNSVAFSGGFGSAMATQAPSQGGFGQPAQIGVGQQALGNVLGSFGQSRQLGPSLPGTGT

Query:  GSPGGFSGGFTSLKPVGVGGFAGAGSSVGSGGFAGVGSGGGGGFGGVGSGGGGFAGTVSTGGGFAGASSTTGGFAAAAGGGFVGAAGGGFAGAAGGGFAG
        GSPGGFSGGFT+ KPVGV            GGFAGVGSGGGGGFGGV    GGFAG  STGGGFAGASST                 GGFAGAAGGGF G
Subjt:  GSPGGFSGGFTSLKPVGVGGFAGAGSSVGSGGFAGVGSGGGGGFGGVGSGGGGFAGTVSTGGGFAGASSTTGGFAAAAGGGFVGAAGGGFAGAAGGGFAG

Query:  AAGGFGAFGSQQGSGGFSAFG-------AGGAGGTGKPPELFTQIRK
         AGGFGAFGSQQ SGGFSAFG       AGGAG TGKPPELFTQIRK
Subjt:  AAGGFGAFGSQQGSGGFSAFG-------AGGAGGTGKPPELFTQIRK

XP_038892123.1 nuclear pore complex protein NUP214 isoform X1 [Benincasa hispida]

1.7e-268

86.97

Show/hide

Query:  MWASPLQPSNTSRQKSQSLQKANATVPSPLSVFQSSHEMLKKSNNEAFSVISENKFTEKSKASDFFSVTRSDSVQKSNINLDQKSFIFTISSKQTPTLKD
        MWASPLQPSN SRQKSQ LQK NAT PS LSVFQSSHEMLKKSNNEAFSV SENKFTEKSKASDFFSVTR+DSVQKSN NLD+K  IFTISSKQ  T KD
Subjt:  MWASPLQPSNTSRQKSQSLQKANATVPSPLSVFQSSHEMLKKSNNEAFSVISENKFTEKSKASDFFSVTRSDSVQKSNINLDQKSFIFTISSKQTPTLKD

Query:  SIDTSNSDNQKTANAKERHTTTSPLFGSADKPESASVGTMSSLVPTVDEARKIEEKRSLTTISPSVPAPALARLNTTSSSSTLFSGFAVSKPLPSSAAVI
         IDTSN DNQKTAN+KERHTTTSPLFGSA+KPESASVGTMSSLVPTVDEARK  EKRSL TISPSVPAP  AR N+ SSSSTLFSGFAVSKPLPSSAA I
Subjt:  SIDTSNSDNQKTANAKERHTTTSPLFGSADKPESASVGTMSSLVPTVDEARKIEEKRSLTTISPSVPAPALARLNTTSSSSTLFSGFAVSKPLPSSAAVI

Query:  DLNQPLSTSTQLNFSSPVVSISDSLFQAPKIVSTSPTLSSLNPSLEPLKKELPILKSDDDTEKQTPASKPESYELKFQPSVTPADKNHVEPTSKTQTVAK
        DLNQPLSTSTQLNFSSPVVS+SDSLFQA K+VSTS TLSSLNP LE  KKELP+ KS+ DTEK+TPASKPES+ELKFQPS+TPA+KNH+EPTSKTQTV K
Subjt:  DLNQPLSTSTQLNFSSPVVSISDSLFQAPKIVSTSPTLSSLNPSLEPLKKELPILKSDDDTEKQTPASKPESYELKFQPSVTPADKNHVEPTSKTQTVAK

Query:  DVGGQVPNVIGNAQPQQPSVAFA---SPNLTSKIFANGRNEASNTAVTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTPMSGAPKPNPFGGPFGNVNAT
        DVGGQ+PNVIG+AQPQ PSVAFA   SPNLTSK   NGRNE SN  VTQDDDMDEEAPET NNVEFNLS LGGFGNSS+PMSGAPKPNPFGG FGNVNAT
Subjt:  DVGGQVPNVIGNAQPQQPSVAFA---SPNLTSKIFANGRNEASNTAVTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTPMSGAPKPNPFGGPFGNVNAT

Query:  SMTSSFTMASPPSGELFRPASFSFQSPLASQAASQPTNSVAFSGGFGSAMATQAPSQGGFGQPAQIGVGQQALGNVLGSFGQSRQLGPSLPGTGTGSPGG
        SMTSSFTMASPPSGELFRPASFSFQSPLASQAAS PTNSVAFSGGFGSAMATQAPSQGGFGQPAQIGVGQQALGNVLGSFGQSRQLGPSLPGTG+GS G 
Subjt:  SMTSSFTMASPPSGELFRPASFSFQSPLASQAASQPTNSVAFSGGFGSAMATQAPSQGGFGQPAQIGVGQQALGNVLGSFGQSRQLGPSLPGTGTGSPGG

Query:  FSGGFTSLKPVGVGGFAGAGSSVGSGGFAGVGSGGGGGFGGVGSGGGGFAGTVSTGGGFAGASSTTGGFAAAAGGGFVGAAGGGFAGAAGGGFAGAAGGF
        FSGGFT +KPV VGGFAG GSS GSGGFAGVGSGGGGGFGGVGS  GGFAGT+STGGGFAGAS+TTGGFA        GAAGGGFAGAAGGGFAGAAGGF
Subjt:  FSGGFTSLKPVGVGGFAGAGSSVGSGGFAGVGSGGGGGFGGVGSGGGGFAGTVSTGGGFAGASSTTGGFAAAAGGGFVGAAGGGFAGAAGGGFAGAAGGF

Query:  GAFGSQQGSGGFSAFG--AGGAGGTGKPPELFTQIRK
        GAFGSQQGSGGFSAFG  AGGAGGTGKPPELFTQIRK
Subjt:  GAFGSQQGSGGFSAFG--AGGAGGTGKPPELFTQIRK

XP_038892124.1 nuclear pore complex protein NUP214 isoform X2 [Benincasa hispida]

1.7e-268

86.97

Show/hide

Query:  MWASPLQPSNTSRQKSQSLQKANATVPSPLSVFQSSHEMLKKSNNEAFSVISENKFTEKSKASDFFSVTRSDSVQKSNINLDQKSFIFTISSKQTPTLKD
        MWASPLQPSN SRQKSQ LQK NAT PS LSVFQSSHEMLKKSNNEAFSV SENKFTEKSKASDFFSVTR+DSVQKSN NLD+K  IFTISSKQ  T KD
Subjt:  MWASPLQPSNTSRQKSQSLQKANATVPSPLSVFQSSHEMLKKSNNEAFSVISENKFTEKSKASDFFSVTRSDSVQKSNINLDQKSFIFTISSKQTPTLKD

Query:  SIDTSNSDNQKTANAKERHTTTSPLFGSADKPESASVGTMSSLVPTVDEARKIEEKRSLTTISPSVPAPALARLNTTSSSSTLFSGFAVSKPLPSSAAVI
         IDTSN DNQKTAN+KERHTTTSPLFGSA+KPESASVGTMSSLVPTVDEARK  EKRSL TISPSVPAP  AR N+ SSSSTLFSGFAVSKPLPSSAA I
Subjt:  SIDTSNSDNQKTANAKERHTTTSPLFGSADKPESASVGTMSSLVPTVDEARKIEEKRSLTTISPSVPAPALARLNTTSSSSTLFSGFAVSKPLPSSAAVI

Query:  DLNQPLSTSTQLNFSSPVVSISDSLFQAPKIVSTSPTLSSLNPSLEPLKKELPILKSDDDTEKQTPASKPESYELKFQPSVTPADKNHVEPTSKTQTVAK
        DLNQPLSTSTQLNFSSPVVS+SDSLFQA K+VSTS TLSSLNP LE  KKELP+ KS+ DTEK+TPASKPES+ELKFQPS+TPA+KNH+EPTSKTQTV K
Subjt:  DLNQPLSTSTQLNFSSPVVSISDSLFQAPKIVSTSPTLSSLNPSLEPLKKELPILKSDDDTEKQTPASKPESYELKFQPSVTPADKNHVEPTSKTQTVAK

Query:  DVGGQVPNVIGNAQPQQPSVAFA---SPNLTSKIFANGRNEASNTAVTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTPMSGAPKPNPFGGPFGNVNAT
        DVGGQ+PNVIG+AQPQ PSVAFA   SPNLTSK   NGRNE SN  VTQDDDMDEEAPET NNVEFNLS LGGFGNSS+PMSGAPKPNPFGG FGNVNAT
Subjt:  DVGGQVPNVIGNAQPQQPSVAFA---SPNLTSKIFANGRNEASNTAVTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTPMSGAPKPNPFGGPFGNVNAT

Query:  SMTSSFTMASPPSGELFRPASFSFQSPLASQAASQPTNSVAFSGGFGSAMATQAPSQGGFGQPAQIGVGQQALGNVLGSFGQSRQLGPSLPGTGTGSPGG
        SMTSSFTMASPPSGELFRPASFSFQSPLASQAAS PTNSVAFSGGFGSAMATQAPSQGGFGQPAQIGVGQQALGNVLGSFGQSRQLGPSLPGTG+GS G 
Subjt:  SMTSSFTMASPPSGELFRPASFSFQSPLASQAASQPTNSVAFSGGFGSAMATQAPSQGGFGQPAQIGVGQQALGNVLGSFGQSRQLGPSLPGTGTGSPGG

Query:  FSGGFTSLKPVGVGGFAGAGSSVGSGGFAGVGSGGGGGFGGVGSGGGGFAGTVSTGGGFAGASSTTGGFAAAAGGGFVGAAGGGFAGAAGGGFAGAAGGF
        FSGGFT +KPV VGGFAG GSS GSGGFAGVGSGGGGGFGGVGS  GGFAGT+STGGGFAGAS+TTGGFA        GAAGGGFAGAAGGGFAGAAGGF
Subjt:  FSGGFTSLKPVGVGGFAGAGSSVGSGGFAGVGSGGGGGFGGVGSGGGGFAGTVSTGGGFAGASSTTGGFAAAAGGGFVGAAGGGFAGAAGGGFAGAAGGF

Query:  GAFGSQQGSGGFSAFG--AGGAGGTGKPPELFTQIRK
        GAFGSQQGSGGFSAFG  AGGAGGTGKPPELFTQIRK
Subjt:  GAFGSQQGSGGFSAFG--AGGAGGTGKPPELFTQIRK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KV45 Uncharacterized protein

7.6e-235

74.13

Show/hide

Query:  MWASPLQPSNTSRQKSQSLQKANATVPSPLSVFQSSHEMLKKSNNEAFSVISENKFT-----EKSKASDFFSVTRSDSVQKSNINLDQKSFIFTISSKQT
        MW SPLQPSNTSRQKS  LQK N T PSP  VFQSSH+MLKK NNEA SV SENKFT     EKSKASDFFS TRSDSVQKSNIN+DQKS IFTISSKQ 
Subjt:  MWASPLQPSNTSRQKSQSLQKANATVPSPLSVFQSSHEMLKKSNNEAFSVISENKFT-----EKSKASDFFSVTRSDSVQKSNINLDQKSFIFTISSKQT

Query:  PTLKDSIDTSNSDNQKTANAKERHTTTSPLFGSADKPESASVGTMSSLVPTVDEARKIEEKRSLTTISPSVPAPALARLNTTSSSSTLFSGFAVSKPLPS
        PT  DSI TSN DNQKTAN KERHTTTSP FGSA+KPES  VG+M SLVPTVD +RK EEK+S+TTIS SV AP  A LNT+SS+STLFSGFAVSK LPS
Subjt:  PTLKDSIDTSNSDNQKTANAKERHTTTSPLFGSADKPESASVGTMSSLVPTVDEARKIEEKRSLTTISPSVPAPALARLNTTSSSSTLFSGFAVSKPLPS

Query:  SAAVIDLNQPLSTSTQLNFSSPVVSISDSLFQAPKIVSTSPTLSSLNPSLEPLKKELPILKSDDDTEKQTPASKPESYELKFQPSVTPADKNHVEPTSKT
        SAAVIDLNQP STSTQLNFSSPVVS S+SLFQAPKIV TSPTLSSLNP+LE  K EL + KS+DD E+Q  +SKP S+ELKFQPS+TPADKNHVEPTSKT
Subjt:  SAAVIDLNQPLSTSTQLNFSSPVVSISDSLFQAPKIVSTSPTLSSLNPSLEPLKKELPILKSDDDTEKQTPASKPESYELKFQPSVTPADKNHVEPTSKT

Query:  QTVAKDVGGQVPNVIGNAQPQQPSVAFA---SPNLTSKIFANGRNEASNTAVTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTPMSGAPKPNPFGGPFG
        QTV KDVGGQ  NV+GNAQPQQPSVAFA   SPNLTSKIFAN RNE SN  VTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTP+SG PKPNPFGGPFG
Subjt:  QTVAKDVGGQVPNVIGNAQPQQPSVAFA---SPNLTSKIFANGRNEASNTAVTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTPMSGAPKPNPFGGPFG

Query:  NVNATSMTSSFTMASPPSGELFRPASFSFQSPLASQAASQPTNSVAFSGGFGSAMATQAPSQGGFGQPAQIGVGQQALGNVLGSFGQSRQLGPSLPGTGT
        NVNA SMTSSF MASPPSGELFRPASFSFQSPLASQAASQPTNSVAFSG FGSA+ TQ PSQGGFGQP+QIGVGQQALGNVLGSFGQSRQLGP++ GTG+
Subjt:  NVNATSMTSSFTMASPPSGELFRPASFSFQSPLASQAASQPTNSVAFSGGFGSAMATQAPSQGGFGQPAQIGVGQQALGNVLGSFGQSRQLGPSLPGTGT

Query:  GSPGGFSGGFTSLKPVGVGGFAGAGSSVGSGGFAGVGSGGGGGFGGVGSGGGGFAGTVSTGGGFAGASSTTGGFAAAAGGGFVGAAGGGFAGAAGGGFAG
        GSPGGFSGGFT+ KPVGV            GGFAGVGSGGGGGFGGV    GGFAG  STGGGFAGASST                 GGFAGAAGGGF G
Subjt:  GSPGGFSGGFTSLKPVGVGGFAGAGSSVGSGGFAGVGSGGGGGFGGVGSGGGGFAGTVSTGGGFAGASSTTGGFAAAAGGGFVGAAGGGFAGAAGGGFAG

Query:  AAGGFGAFGSQQGSGGFSAFG------------------------------------------------AGGAGGTGKPPELFTQIRK
         AGGFGAFGSQQ SGGFSAFG                                                AGGAG TGKPPELFTQIRK
Subjt:  AAGGFGAFGSQQGSGGFSAFG------------------------------------------------AGGAGGTGKPPELFTQIRK

A0A1S3BDU8 LOW QUALITY PROTEIN: nuclear pore complex protein NUP214

2.1e-229

77.55

Show/hide

Query:  MWASPLQPSNTSRQKSQSLQKANATVPSPLSVFQSSHEMLKKSNNEAFSVISENKF----TEKSKASDFFSVTRSDSVQKSNINLDQKSFIFTISSKQTP
        MWAS LQPSNTSRQKS  LQK NAT PSP  VFQSSH+MLKK   +    + +        EKSKASDFFS TRSDSVQKS IN+DQKS IFTISSKQTP
Subjt:  MWASPLQPSNTSRQKSQSLQKANATVPSPLSVFQSSHEMLKKSNNEAFSVISENKF----TEKSKASDFFSVTRSDSVQKSNINLDQKSFIFTISSKQTP

Query:  TLKDSIDTSNSDNQKTANAKERHTTTSPLFGSADKPESASVGTMSSLVPTVDEARKIEEKRSLTTISPSVPAPALARLNTTSSSSTLFSGFAVSKPLPSS
          +DSI TSN DNQKTAN KERHTTTS LFGSA+KPES  VGTM SLVPTVD ARK EEK+S+TTIS SV AP  A LNT+SS+STLFSGFAVSK LPSS
Subjt:  TLKDSIDTSNSDNQKTANAKERHTTTSPLFGSADKPESASVGTMSSLVPTVDEARKIEEKRSLTTISPSVPAPALARLNTTSSSSTLFSGFAVSKPLPSS

Query:  ---AAVIDLNQPLSTSTQLNFSSPVVSISDSLFQAPKIVSTSPTLSSLNPSLEPLKKELPILKSDDDTEKQTPASKPESYELKFQPSVTPADKNHVEPTS
           AAV+DLNQP STSTQLNF SPVVS S+SLFQAPK V TSPTLSSLNP++E  K EL +LKS+DD EKQT +SKP S+ELKFQPS+TPADKNHVEPTS
Subjt:  ---AAVIDLNQPLSTSTQLNFSSPVVSISDSLFQAPKIVSTSPTLSSLNPSLEPLKKELPILKSDDDTEKQTPASKPESYELKFQPSVTPADKNHVEPTS

Query:  KTQTVAKDVGGQVPNVIGNAQPQQPSVAFA---SPNLTSKIFANGRNEASNTAVTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTPMSGAPKPNPFGGP
        KTQTV KDVGGQVPNV+G+AQ QQPSVAFA   S NLTSKIFAN RNE SN  VTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTP+SGAPKPNPFGGP
Subjt:  KTQTVAKDVGGQVPNVIGNAQPQQPSVAFA---SPNLTSKIFANGRNEASNTAVTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTPMSGAPKPNPFGGP

Query:  FGNVNATSMTSSFTMASPPSGELFRPASFSFQSPLASQAASQPTNSVAFSGGFGSAMATQAPSQGGFGQPAQIGVGQQALGNVLGSFGQSRQLGPSLPGT
        FGNVNA S+T+SF MASPPSGELFRPASFSFQSPLASQAASQPTNSVAFSG FGSA+ATQAP QGGFGQPAQIGVGQQALGNVLGSFGQSRQLGP+LPGT
Subjt:  FGNVNATSMTSSFTMASPPSGELFRPASFSFQSPLASQAASQPTNSVAFSGGFGSAMATQAPSQGGFGQPAQIGVGQQALGNVLGSFGQSRQLGPSLPGT

Query:  GTGSPGGFSGGFTSLKPVGVGGFAGAGSSVGSGGFAGVGSGGGGGFGGVGSGGGGFAGTVSTGGGFAGASSTTGGFAAAAGGGFVGAAGGGFAGAAGGGF
        G+GSPGGFSGGFT+ KPVGV            GGFAGVGSGGGGGFGGV    GGFAG  STGGGFAGASSTT                GGFAGAAGGGF
Subjt:  GTGSPGGFSGGFTSLKPVGVGGFAGAGSSVGSGGFAGVGSGGGGGFGGVGSGGGGFAGTVSTGGGFAGASSTTGGFAAAAGGGFVGAAGGGFAGAAGGGF

Query:  AGAAGGFGAFGSQQGS-GGFSAFG---AGGAGGTGKPPELFTQIRK
         G AGGFGAFGSQQ S GGFSAFG   AGGA  TGKPPELFTQIRK
Subjt:  AGAAGGFGAFGSQQGS-GGFSAFG---AGGAGGTGKPPELFTQIRK

A0A5A7SY34 Nuclear pore complex protein NUP214

3.1e-236

78.98

Show/hide

Query:  MWASPLQPSNTSRQKSQSLQKANATVPSPLSVFQSSHEMLKKSNNEAFSVISENKFT-----EKSKASDFFSVTRSDSVQKSNINLDQKSFIFTISSKQT
        MWAS LQPSNTSRQKS  LQK NAT PSP  VFQSSH+MLKK+NN A S  SENKFT     EKSKASDFFS TRSDSVQKS IN+DQKS IFTISSKQT
Subjt:  MWASPLQPSNTSRQKSQSLQKANATVPSPLSVFQSSHEMLKKSNNEAFSVISENKFT-----EKSKASDFFSVTRSDSVQKSNINLDQKSFIFTISSKQT

Query:  PTLKDSIDTSNSDNQKTANAKERHTTTSPLFGSADKPESASVGTMSSLVPTVDEARKIEEKRSLTTISPSVPAPALARLNTTSSSSTLFSGFAVSKPLPS
        P  +DSI TSN DNQKTAN KERHTTTS LFGSA+KPES  VGTM SLVPTVD ARK EEK+S+TTIS SV AP  A LNT+SS+STLFSGFAVSK LPS
Subjt:  PTLKDSIDTSNSDNQKTANAKERHTTTSPLFGSADKPESASVGTMSSLVPTVDEARKIEEKRSLTTISPSVPAPALARLNTTSSSSTLFSGFAVSKPLPS

Query:  S---AAVIDLNQPLSTSTQLNFSSPVVSISDSLFQAPKIVSTSPTLSSLNPSLEPLKKELPILKSDDDTEKQTPASKPESYELKFQPSVTPADKNHVEPT
        S   AAV+DLNQP STSTQLNF SPVVS S+SLFQAPK V TSPTLSSLNP++E  K EL +LKS+DD EKQT +SKP S+ELKFQPS+TPADKNHVEPT
Subjt:  S---AAVIDLNQPLSTSTQLNFSSPVVSISDSLFQAPKIVSTSPTLSSLNPSLEPLKKELPILKSDDDTEKQTPASKPESYELKFQPSVTPADKNHVEPT

Query:  SKTQTVAKDVGGQVPNVIGNAQPQQPSVAFA---SPNLTSKIFANGRNEASNTAVTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTPMSGAPKPNPFGG
        SKTQTV KDVGGQVPNV+G+AQ QQPSVAFA   S NLTSKIFAN RNE SN  VTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTP+SGAPKPNPFGG
Subjt:  SKTQTVAKDVGGQVPNVIGNAQPQQPSVAFA---SPNLTSKIFANGRNEASNTAVTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTPMSGAPKPNPFGG

Query:  PFGNVNATSMTSSFTMASPPSGELFRPASFSFQSPLASQAASQPTNSVAFSGGFGSAMATQAPSQGGFGQPAQIGVGQQALGNVLGSFGQSRQLGPSLPG
        PFGNVNA S+T+SF MASPPSGELFRPASFSFQSPLASQAASQPTNSVAFSG FGSA+ATQAP QGGFGQPAQIGVGQQALGNVLGSFGQSRQLGP+LPG
Subjt:  PFGNVNATSMTSSFTMASPPSGELFRPASFSFQSPLASQAASQPTNSVAFSGGFGSAMATQAPSQGGFGQPAQIGVGQQALGNVLGSFGQSRQLGPSLPG

Query:  TGTGSPGGFSGGFTSLKPVGVGGFAGAGSSVGSGGFAGVGSGGGGGFGGVGSGGGGFAGTVSTGGGFAGASSTTGGFAAAAGGGFVGAAGGGFAGAAGGG
        TG+GSPGGFSGGFT+ KPVGV            GGFAGVGSGGGGGFGGV    GGFAG  STGGGFAGASSTT                GGFAGAAGGG
Subjt:  TGTGSPGGFSGGFTSLKPVGVGGFAGAGSSVGSGGFAGVGSGGGGGFGGVGSGGGGFAGTVSTGGGFAGASSTTGGFAAAAGGGFVGAAGGGFAGAAGGG

Query:  FAGAAGGFGAFGSQQGS-GGFSAFG---AGGAGGTGKPPELFTQIRK
        F G AGGFGAFGSQQ S GGFSAFG   AGGA  TGKPPELFTQIRK
Subjt:  FAGAAGGFGAFGSQQGS-GGFSAFG---AGGAGGTGKPPELFTQIRK

A0A5D3CWG0 Nuclear pore complex protein NUP214

3.1e-236

78.98

Show/hide

Query:  MWASPLQPSNTSRQKSQSLQKANATVPSPLSVFQSSHEMLKKSNNEAFSVISENKFT-----EKSKASDFFSVTRSDSVQKSNINLDQKSFIFTISSKQT
        MWAS LQPSNTSRQKS  LQK NAT PSP  VFQSSH+MLKK+NN A S  SENKFT     EKSKASDFFS TRSDSVQKS IN+DQKS IFTISSKQT
Subjt:  MWASPLQPSNTSRQKSQSLQKANATVPSPLSVFQSSHEMLKKSNNEAFSVISENKFT-----EKSKASDFFSVTRSDSVQKSNINLDQKSFIFTISSKQT

Query:  PTLKDSIDTSNSDNQKTANAKERHTTTSPLFGSADKPESASVGTMSSLVPTVDEARKIEEKRSLTTISPSVPAPALARLNTTSSSSTLFSGFAVSKPLPS
        P  +DSI TSN DNQKTAN KERHTTTS LFGSA+KPES  VGTM SLVPTVD ARK EEK+S+TTIS SV AP  A LNT+SS+STLFSGFAVSK LPS
Subjt:  PTLKDSIDTSNSDNQKTANAKERHTTTSPLFGSADKPESASVGTMSSLVPTVDEARKIEEKRSLTTISPSVPAPALARLNTTSSSSTLFSGFAVSKPLPS

Query:  S---AAVIDLNQPLSTSTQLNFSSPVVSISDSLFQAPKIVSTSPTLSSLNPSLEPLKKELPILKSDDDTEKQTPASKPESYELKFQPSVTPADKNHVEPT
        S   AAV+DLNQP STSTQLNF SPVVS S+SLFQAPK V TSPTLSSLNP++E  K EL +LKS+DD EKQT +SKP S+ELKFQPS+TPADKNHVEPT
Subjt:  S---AAVIDLNQPLSTSTQLNFSSPVVSISDSLFQAPKIVSTSPTLSSLNPSLEPLKKELPILKSDDDTEKQTPASKPESYELKFQPSVTPADKNHVEPT

Query:  SKTQTVAKDVGGQVPNVIGNAQPQQPSVAFA---SPNLTSKIFANGRNEASNTAVTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTPMSGAPKPNPFGG
        SKTQTV KDVGGQVPNV+G+AQ QQPSVAFA   S NLTSKIFAN RNE SN  VTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTP+SGAPKPNPFGG
Subjt:  SKTQTVAKDVGGQVPNVIGNAQPQQPSVAFA---SPNLTSKIFANGRNEASNTAVTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTPMSGAPKPNPFGG

Query:  PFGNVNATSMTSSFTMASPPSGELFRPASFSFQSPLASQAASQPTNSVAFSGGFGSAMATQAPSQGGFGQPAQIGVGQQALGNVLGSFGQSRQLGPSLPG
        PFGNVNA S+T+SF MASPPSGELFRPASFSFQSPLASQAASQPTNSVAFSG FGSA+ATQAP QGGFGQPAQIGVGQQALGNVLGSFGQSRQLGP+LPG
Subjt:  PFGNVNATSMTSSFTMASPPSGELFRPASFSFQSPLASQAASQPTNSVAFSGGFGSAMATQAPSQGGFGQPAQIGVGQQALGNVLGSFGQSRQLGPSLPG

Query:  TGTGSPGGFSGGFTSLKPVGVGGFAGAGSSVGSGGFAGVGSGGGGGFGGVGSGGGGFAGTVSTGGGFAGASSTTGGFAAAAGGGFVGAAGGGFAGAAGGG
        TG+GSPGGFSGGFT+ KPVGV            GGFAGVGSGGGGGFGGV    GGFAG  STGGGFAGASSTT                GGFAGAAGGG
Subjt:  TGTGSPGGFSGGFTSLKPVGVGGFAGAGSSVGSGGFAGVGSGGGGGFGGVGSGGGGFAGTVSTGGGFAGASSTTGGFAAAAGGGFVGAAGGGFAGAAGGG

Query:  FAGAAGGFGAFGSQQGS-GGFSAFG---AGGAGGTGKPPELFTQIRK
        F G AGGFGAFGSQQ S GGFSAFG   AGGA  TGKPPELFTQIRK
Subjt:  FAGAAGGFGAFGSQQGS-GGFSAFG---AGGAGGTGKPPELFTQIRK

A0A6J1G030 nuclear pore complex protein NUP214 isoform X1

4.2e-217

73.95

Show/hide

Query:  ASPLQPSNTSRQKSQSLQKANATVPSPLSVFQSSHEMLKKSNNEAFSVISENKFT-----EKSKASDFFSVTRSDSVQKSNINLDQKSFIFTISSKQTPT
        A+P   ++  RQK Q LQK N T PS L VFQSSHEM+KKSN+EA+S  SENKF      EKSKASDFFS+ RSDSVQKSN+N +QKS IF  SSK   T
Subjt:  ASPLQPSNTSRQKSQSLQKANATVPSPLSVFQSSHEMLKKSNNEAFSVISENKFT-----EKSKASDFFSVTRSDSVQKSNINLDQKSFIFTISSKQTPT

Query:  LKDSIDTSNSDNQKTANAKERHTTTSPLFGSADKPESASVGTMSSLVPTVDEARKIEEKRSLTTISPSVPAPALARLNTTSSSSTLFSGFAVSKPLPSSA
         KDSI+T N ++QKTAN KER TT SPLFGSA+KPE  SVGT SSLVPTVD  RK EEK+  T  SPSVPAP  A +NT  S+STLFSG  +SK  PS A
Subjt:  LKDSIDTSNSDNQKTANAKERHTTTSPLFGSADKPESASVGTMSSLVPTVDEARKIEEKRSLTTISPSVPAPALARLNTTSSSSTLFSGFAVSKPLPSSA

Query:  AVIDLNQPLSTSTQLNFSSPVVSISDSLFQAPKIVSTSPTLSSLNPSLEPLKKELPILKSDDDTEKQTPASKPESYELKFQPSVTPADKNHVEPTSKTQT
        AV+DLN+PLSTSTQ +F+SPVVS+SDSLFQAPK+VS    LSSLNP+L    KE P+ KSD DTEKQ PASKPES ELK QPSVT A  NHVEPTS TQT
Subjt:  AVIDLNQPLSTSTQLNFSSPVVSISDSLFQAPKIVSTSPTLSSLNPSLEPLKKELPILKSDDDTEKQTPASKPESYELKFQPSVTPADKNHVEPTSKTQT

Query:  VAKDVGGQVPNVIGNAQPQQPSVAFA---SPNLTSKIFANGRNEASNTAVTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTPMSGAPKPNPFGGPFGNV
        V+KDVGG VP V+ +AQPQQ   AF    +PN TSK  ANG++E S+  +TQDDDMDEEAPET NNVEF+LSSLGGFG +STPMS APKPNPFGG FGNV
Subjt:  VAKDVGGQVPNVIGNAQPQQPSVAFA---SPNLTSKIFANGRNEASNTAVTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTPMSGAPKPNPFGGPFGNV

Query:  NATSMTSSFTMASPPSGELFRPASFSFQSPLASQAASQPTNSVAFSGGFGSAMATQAPSQGGFGQPAQIGVGQQALGNVLGSFGQSRQLGPSLPGTGTGS
        NATSM SSFT ASPPSGELFRPASFSFQSPLASQAASQPTN+VAFSG FGS MATQAP+QGGFGQPAQIGVGQQALG VLGSFGQSRQLGPSLPGT +GS
Subjt:  NATSMTSSFTMASPPSGELFRPASFSFQSPLASQAASQPTNSVAFSGGFGSAMATQAPSQGGFGQPAQIGVGQQALGNVLGSFGQSRQLGPSLPGTGTGS

Query:  PGGFS-GGFTSLKPVGVGGFAGAGSSVGSGGFAGVGSGGGGGFGGVGSGGGGFAGTVSTGGGFAGASSTTGGFAAAAGGGFVGAAGGGFAGAAGGGFAGA
        PGGF+ GGFTS+KPVG             GGFAGVGSGGGGGFGG G  GGGFAG  STGGGFAGAS  TGGFA A GGGF GAAGGGFAGAAGGGFAGA
Subjt:  PGGFS-GGFTSLKPVGVGGFAGAGSSVGSGGFAGVGSGGGGGFGGVGSGGGGFAGTVSTGGGFAGASSTTGGFAAAAGGGFVGAAGGGFAGAAGGGFAGA

Query:  AGGFGAFGSQQGSGGFSAFGA--GGAGGTGKPPELFTQIRK
        AGGFGAFG+QQGSGGFSAFGA  GG+GGTGKPPELFTQIRK
Subjt:  AGGFGAFGSQQGSGGFSAFGA--GGAGGTGKPPELFTQIRK

SwissProt top hits

e value

%identity

Alignment

F4I1T7 Nuclear pore complex protein NUP214

3.4e-46

37.11

Show/hide

Query:  SLQKANATVPSPLSVFQSSHEMLKKSNNEAFSVISENKFTEKSKASDFFSVTRSDSV------------QKSNINLDQKSFIFT-----ISSKQTPTLKD
        S+Q+ + T  S  S F+SS     K     FS +S         +   F    S S+              S   LD  S +FT     +SS     +  
Subjt:  SLQKANATVPSPLSVFQSSHEMLKKSNNEAFSVISENKFTEKSKASDFFSVTRSDSV------------QKSNINLDQKSFIFT-----ISSKQTPTLKD

Query:  SIDTSNSDNQKTANAKERHTTTSP----LFGSADKPESASVGTMSSLVPTVDEARKIEEKRSLTTISPSVPAPALARLNTTSSSSTLFSGFA----VSKP
        SI  S++   +T +     T ++      FG         +   +   P+           +L  +SPS P      +++++  S+LF   A    VS  
Subjt:  SIDTSNSDNQKTANAKERHTTTSP----LFGSADKPESASVGTMSSLVPTVDEARKIEEKRSLTTISPSVPAPALARLNTTSSSSTLFSGFA----VSKP

Query:  LPSSAAVIDLNQPLSTSTQLNFSSPVVSISDSLFQAPKIVSTSPTLSSLNPSLEPLKKEL---PILKSDDDTEKQTPASKPESYELKFQ-------PSVT
          S+ + +  +  L +ST L+ S+P ++  D+ FQ+P++ + S  +    P  EP K E     IL +    +    A+K ++  L  +        +VT
Subjt:  LPSSAAVIDLNQPLSTSTQLNFSSPVVSISDSLFQAPKIVSTSPTLSSLNPSLEPLKKEL---PILKSDDDTEKQTPASKPESYELKFQ-------PSVT

Query:  PADKNHVEP--TSKTQTVAKDVGGQVPNVIGNAQPQQPSVAFASPNLTSKIFANGRNEASNTAVTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTPMSG
        P   +      +S TQ+    +     +  G++QPQQ S   A    +S   A+   E  +   TQ+D+MDEEAPE +   E ++ S GGFG  STP  G
Subjt:  PADKNHVEP--TSKTQTVAKDVGGQVPNVIGNAQPQQPSVAFASPNLTSKIFANGRNEASNTAVTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTPMSG

Query:  APKPNPFGGPFGNVNATSMTSSFTMASPPSGELFRPASFSFQSPLASQAASQPTNSVAFSGGFGSAMAT--QAPSQGGFGQPAQIGVGQQALGNVLGSFG
        APK NPFGGPFG  NAT+ TS+    + PSGELF+PASF+FQ+P  SQ A           GFGS   T  Q P+Q GFGQP+QIG GQQALG+VLGSFG
Subjt:  APKPNPFGGPFGNVNATSMTSSFTMASPPSGELFRPASFSFQSPLASQAASQPTNSVAFSGGFGSAMAT--QAPSQGGFGQPAQIGVGQQALGNVLGSFG

Query:  QSRQLGPSLPGTGTGSPGGFSGGFTSLKPVGVGGFAGAGSSVGSGGFAGVGSGGGGGFGGVGSGGGGFAGTVST-GGGFAGASSTTGGFAAAA----GGG
        QSRQ+G  LPG   GSP GF G             +G  ++  SGGFA  GS   GGF  + S G GFAG  ST  GGFA  +S +GGFA AA    GGG
Subjt:  QSRQLGPSLPGTGTGSPGGFSGGFTSLKPVGVGGFAGAGSSVGSGGFAGVGSGGGGGFGGVGSGGGGFAGTVST-GGGFAGASSTTGGFAAAA----GGG

Query:  F--VGAAGGGFAGAA----GGGFAGAA--GGFGAFG----SQQGSGGFSAFGAGGAGGTGKPPELFTQIRK
        F  +G+  GGF G A     GGFAGAA  GGFG FG     Q G GGFSAFG G +G TGKP ELFTQ+RK
Subjt:  F--VGAAGGGFAGAA----GGGFAGAA--GGFGAFG----SQQGSGGFSAFGAGGAGGTGKPPELFTQIRK

Arabidopsis top hits

e value

%identity

Alignment

AT1G55540.1 Nuclear pore complex protein

2.4e-47

37.11

Show/hide

Query:  SLQKANATVPSPLSVFQSSHEMLKKSNNEAFSVISENKFTEKSKASDFFSVTRSDSV------------QKSNINLDQKSFIFT-----ISSKQTPTLKD
        S+Q+ + T  S  S F+SS     K     FS +S         +   F    S S+              S   LD  S +FT     +SS     +  
Subjt:  SLQKANATVPSPLSVFQSSHEMLKKSNNEAFSVISENKFTEKSKASDFFSVTRSDSV------------QKSNINLDQKSFIFT-----ISSKQTPTLKD

Query:  SIDTSNSDNQKTANAKERHTTTSP----LFGSADKPESASVGTMSSLVPTVDEARKIEEKRSLTTISPSVPAPALARLNTTSSSSTLFSGFA----VSKP
        SI  S++   +T +     T ++      FG         +   +   P+           +L  +SPS P      +++++  S+LF   A    VS  
Subjt:  SIDTSNSDNQKTANAKERHTTTSP----LFGSADKPESASVGTMSSLVPTVDEARKIEEKRSLTTISPSVPAPALARLNTTSSSSTLFSGFA----VSKP

Query:  LPSSAAVIDLNQPLSTSTQLNFSSPVVSISDSLFQAPKIVSTSPTLSSLNPSLEPLKKEL---PILKSDDDTEKQTPASKPESYELKFQ-------PSVT
          S+ + +  +  L +ST L+ S+P ++  D+ FQ+P++ + S  +    P  EP K E     IL +    +    A+K ++  L  +        +VT
Subjt:  LPSSAAVIDLNQPLSTSTQLNFSSPVVSISDSLFQAPKIVSTSPTLSSLNPSLEPLKKEL---PILKSDDDTEKQTPASKPESYELKFQ-------PSVT

Query:  PADKNHVEP--TSKTQTVAKDVGGQVPNVIGNAQPQQPSVAFASPNLTSKIFANGRNEASNTAVTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTPMSG
        P   +      +S TQ+    +     +  G++QPQQ S   A    +S   A+   E  +   TQ+D+MDEEAPE +   E ++ S GGFG  STP  G
Subjt:  PADKNHVEP--TSKTQTVAKDVGGQVPNVIGNAQPQQPSVAFASPNLTSKIFANGRNEASNTAVTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTPMSG

Query:  APKPNPFGGPFGNVNATSMTSSFTMASPPSGELFRPASFSFQSPLASQAASQPTNSVAFSGGFGSAMAT--QAPSQGGFGQPAQIGVGQQALGNVLGSFG
        APK NPFGGPFG  NAT+ TS+    + PSGELF+PASF+FQ+P  SQ A           GFGS   T  Q P+Q GFGQP+QIG GQQALG+VLGSFG
Subjt:  APKPNPFGGPFGNVNATSMTSSFTMASPPSGELFRPASFSFQSPLASQAASQPTNSVAFSGGFGSAMAT--QAPSQGGFGQPAQIGVGQQALGNVLGSFG

Query:  QSRQLGPSLPGTGTGSPGGFSGGFTSLKPVGVGGFAGAGSSVGSGGFAGVGSGGGGGFGGVGSGGGGFAGTVST-GGGFAGASSTTGGFAAAA----GGG
        QSRQ+G  LPG   GSP GF G             +G  ++  SGGFA  GS   GGF  + S G GFAG  ST  GGFA  +S +GGFA AA    GGG
Subjt:  QSRQLGPSLPGTGTGSPGGFSGGFTSLKPVGVGGFAGAGSSVGSGGFAGVGSGGGGGFGGVGSGGGGFAGTVST-GGGFAGASSTTGGFAAAA----GGG

Query:  F--VGAAGGGFAGAA----GGGFAGAA--GGFGAFG----SQQGSGGFSAFGAGGAGGTGKPPELFTQIRK
        F  +G+  GGF G A     GGFAGAA  GGFG FG     Q G GGFSAFG G +G TGKP ELFTQ+RK
Subjt:  F--VGAAGGGFAGAA----GGGFAGAA--GGFGAFG----SQQGSGGFSAFGAGGAGGTGKPPELFTQIRK

AT1G55540.2 Nuclear pore complex protein

2.4e-47

37.11

Show/hide

Query:  SLQKANATVPSPLSVFQSSHEMLKKSNNEAFSVISENKFTEKSKASDFFSVTRSDSV------------QKSNINLDQKSFIFT-----ISSKQTPTLKD
        S+Q+ + T  S  S F+SS     K     FS +S         +   F    S S+              S   LD  S +FT     +SS     +  
Subjt:  SLQKANATVPSPLSVFQSSHEMLKKSNNEAFSVISENKFTEKSKASDFFSVTRSDSV------------QKSNINLDQKSFIFT-----ISSKQTPTLKD

Query:  SIDTSNSDNQKTANAKERHTTTSP----LFGSADKPESASVGTMSSLVPTVDEARKIEEKRSLTTISPSVPAPALARLNTTSSSSTLFSGFA----VSKP
        SI  S++   +T +     T ++      FG         +   +   P+           +L  +SPS P      +++++  S+LF   A    VS  
Subjt:  SIDTSNSDNQKTANAKERHTTTSP----LFGSADKPESASVGTMSSLVPTVDEARKIEEKRSLTTISPSVPAPALARLNTTSSSSTLFSGFA----VSKP

Query:  LPSSAAVIDLNQPLSTSTQLNFSSPVVSISDSLFQAPKIVSTSPTLSSLNPSLEPLKKEL---PILKSDDDTEKQTPASKPESYELKFQ-------PSVT
          S+ + +  +  L +ST L+ S+P ++  D+ FQ+P++ + S  +    P  EP K E     IL +    +    A+K ++  L  +        +VT
Subjt:  LPSSAAVIDLNQPLSTSTQLNFSSPVVSISDSLFQAPKIVSTSPTLSSLNPSLEPLKKEL---PILKSDDDTEKQTPASKPESYELKFQ-------PSVT

Query:  PADKNHVEP--TSKTQTVAKDVGGQVPNVIGNAQPQQPSVAFASPNLTSKIFANGRNEASNTAVTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTPMSG
        P   +      +S TQ+    +     +  G++QPQQ S   A    +S   A+   E  +   TQ+D+MDEEAPE +   E ++ S GGFG  STP  G
Subjt:  PADKNHVEP--TSKTQTVAKDVGGQVPNVIGNAQPQQPSVAFASPNLTSKIFANGRNEASNTAVTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTPMSG

Query:  APKPNPFGGPFGNVNATSMTSSFTMASPPSGELFRPASFSFQSPLASQAASQPTNSVAFSGGFGSAMAT--QAPSQGGFGQPAQIGVGQQALGNVLGSFG
        APK NPFGGPFG  NAT+ TS+    + PSGELF+PASF+FQ+P  SQ A           GFGS   T  Q P+Q GFGQP+QIG GQQALG+VLGSFG
Subjt:  APKPNPFGGPFGNVNATSMTSSFTMASPPSGELFRPASFSFQSPLASQAASQPTNSVAFSGGFGSAMAT--QAPSQGGFGQPAQIGVGQQALGNVLGSFG

Query:  QSRQLGPSLPGTGTGSPGGFSGGFTSLKPVGVGGFAGAGSSVGSGGFAGVGSGGGGGFGGVGSGGGGFAGTVST-GGGFAGASSTTGGFAAAA----GGG
        QSRQ+G  LPG   GSP GF G             +G  ++  SGGFA  GS   GGF  + S G GFAG  ST  GGFA  +S +GGFA AA    GGG
Subjt:  QSRQLGPSLPGTGTGSPGGFSGGFTSLKPVGVGGFAGAGSSVGSGGFAGVGSGGGGGFGGVGSGGGGFAGTVST-GGGFAGASSTTGGFAAAA----GGG

Query:  F--VGAAGGGFAGAA----GGGFAGAA--GGFGAFG----SQQGSGGFSAFGAGGAGGTGKPPELFTQIRK
        F  +G+  GGF G A     GGFAGAA  GGFG FG     Q G GGFSAFG G +G TGKP ELFTQ+RK
Subjt:  F--VGAAGGGFAGAA----GGGFAGAA--GGFGAFG----SQQGSGGFSAFGAGGAGGTGKPPELFTQIRK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTGGGCTAGTCCTTTACAACCATCAAATACCTCCAGACAGAAATCTCAATCATTGCAAAAAGCTAATGCTACAGTGCCTTCTCCACTGTCAGTATTCCAATCATCACA
TGAAATGCTGAAGAAAAGTAATAATGAAGCTTTCAGTGTGATTTCAGAAAACAAATTTACTGAAAAGTCGAAAGCTTCTGATTTCTTCTCAGTCACTAGGAGCGACTCTG
TCCAGAAATCTAATATAAACCTTGATCAGAAATCATTCATCTTTACCATATCATCTAAGCAGACGCCCACACTGAAAGATTCTATTGATACTTCTAATTCGGACAATCAG
AAGACTGCTAACGCAAAGGAGAGGCATACAACTACAAGTCCACTTTTTGGATCTGCAGATAAACCTGAATCTGCGTCCGTTGGTACGATGTCTTCTCTGGTTCCTACTGT
TGATGAAGCAAGAAAGATTGAAGAAAAAAGATCGCTGACAACAATTTCACCATCAGTTCCAGCACCAGCACTAGCACGGTTAAATACTACTTCAAGTTCATCGACTTTAT
TTTCAGGATTTGCTGTAAGCAAACCTCTTCCAAGTTCTGCTGCTGTTATAGATCTCAATCAACCTCTGTCAACATCAACCCAATTAAACTTCTCCTCTCCAGTTGTTTCT
ATTTCTGATTCCCTATTTCAGGCACCTAAGATAGTATCAACATCACCTACTCTATCTTCCTTGAATCCTTCATTGGAGCCCTTGAAAAAAGAGCTACCTATTTTGAAATC
AGATGACGATACTGAAAAGCAAACACCAGCTTCAAAGCCTGAGTCTTATGAACTGAAATTTCAACCTTCTGTAACACCTGCTGATAAAAATCATGTAGAGCCAACTTCTA
AAACCCAGACAGTTGCCAAAGATGTTGGAGGACAGGTTCCAAATGTAATAGGGAATGCTCAACCACAACAGCCATCTGTTGCTTTTGCTTCACCAAACTTAACTTCTAAG
ATTTTTGCGAATGGTAGAAATGAAGCTTCAAACACGGCGGTTACTCAGGATGATGATATGGACGAGGAGGCTCCAGAGACGAATAACAATGTCGAGTTTAATTTGAGCAG
CTTAGGAGGATTTGGAAATAGCTCCACCCCTATGTCAGGTGCTCCTAAACCAAATCCATTTGGTGGTCCATTTGGTAATGTGAATGCAACATCGATGACCTCTTCCTTTA
CTATGGCATCTCCTCCAAGTGGAGAGCTGTTTCGGCCTGCATCATTTAGCTTCCAATCTCCATTGGCTTCACAAGCAGCGTCACAACCCACAAATTCAGTTGCATTCTCT
GGTGGGTTTGGCTCTGCAATGGCTACTCAAGCCCCATCGCAAGGTGGGTTCGGTCAGCCTGCTCAGATTGGAGTAGGGCAGCAAGCACTTGGGAATGTTCTTGGTTCATT
TGGACAATCAAGACAGCTTGGTCCTAGTCTCCCTGGAACTGGTACAGGATCCCCTGGCGGTTTTAGTGGTGGCTTTACCAGTCTAAAACCGGTTGGAGTTGGTGGGTTTG
CCGGTGCTGGTTCAAGTGTTGGTAGTGGTGGGTTCGCTGGTGTTGGTTCAGGGGGTGGTGGCGGTTTTGGTGGTGTTGGTTCAGGTGGCGGTGGTTTCGCTGGCACAGTC
TCAACTGGTGGAGGATTTGCTGGTGCTTCCTCTACAACGGGAGGTTTCGCAGCTGCTGCAGGCGGGGGTTTTGTAGGTGCTGCAGGTGGAGGCTTTGCAGGTGCTGCAGG
TGGAGGCTTTGCAGGTGCTGCAGGTGGATTTGGGGCGTTCGGCAGCCAGCAAGGAAGCGGCGGTTTCTCTGCTTTTGGTGCTGGTGGAGCTGGAGGAACTGGAAAACCTC
CTGAGCTTTTCACCCAGATTAGAAAGTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MWASPLQPSNTSRQKSQSLQKANATVPSPLSVFQSSHEMLKKSNNEAFSVISENKFTEKSKASDFFSVTRSDSVQKSNINLDQKSFIFTISSKQTPTLKDSIDTSNSDNQ
KTANAKERHTTTSPLFGSADKPESASVGTMSSLVPTVDEARKIEEKRSLTTISPSVPAPALARLNTTSSSSTLFSGFAVSKPLPSSAAVIDLNQPLSTSTQLNFSSPVVS
ISDSLFQAPKIVSTSPTLSSLNPSLEPLKKELPILKSDDDTEKQTPASKPESYELKFQPSVTPADKNHVEPTSKTQTVAKDVGGQVPNVIGNAQPQQPSVAFASPNLTSK
IFANGRNEASNTAVTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTPMSGAPKPNPFGGPFGNVNATSMTSSFTMASPPSGELFRPASFSFQSPLASQAASQPTNSVAFS
GGFGSAMATQAPSQGGFGQPAQIGVGQQALGNVLGSFGQSRQLGPSLPGTGTGSPGGFSGGFTSLKPVGVGGFAGAGSSVGSGGFAGVGSGGGGGFGGVGSGGGGFAGTV
STGGGFAGASSTTGGFAAAAGGGFVGAAGGGFAGAAGGGFAGAAGGFGAFGSQQGSGGFSAFGAGGAGGTGKPPELFTQIRK

Lsi04G007530 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome