; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G007580 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G007580
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr04:7060526..7064648
RNA-Seq ExpressionLsi04G007580
SyntenyLsi04G007580
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648632.1 hypothetical protein Csa_009176 [Cucumis sativus]8.5e-7268.07Show/hide
Query:  MATSLASFSRIRTNCSRKQFPELPRHFAP-QNRISFFVSRNPSFRLCLSNAEISANDPLKSEDGFSNHEMEGNNDLLGFTEMRQKSSWLYRKETKIVLAL
        MA SLASFSRIR+NCSR Q PELPRHFAP Q++I F VSRNPS R CLSNA+ISANDPLKSED FSNHEMEG+ +     E +QK     +K  +     
Subjt:  MATSLASFSRIRTNCSRKQFPELPRHFAP-QNRISFFVSRNPSFRLCLSNAEISANDPLKSEDGFSNHEMEGNNDLLGFTEMRQKSSWLYRKETKIVLAL

Query:  YFFSTLSYWMHQCGLHIRVLDKLRRYGISGILSYGLLNTVYYLTTFLIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDR
                          VLDKLRRYG+SGILSYGLLNTVYYLTTFL+VWFYIAPAP KMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDR
Subjt:  YFFSTLSYWMHQCGLHIRVLDKLRRYGISGILSYGLLNTVYYLTTFLIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDR

Query:  GLSWFTVKYNFESQGKAFMAIVGFCLGLALLLFIAVTL
        GLSWFTV YNFESQGK         +   L  FI V L
Subjt:  GLSWFTVKYNFESQGKAFMAIVGFCLGLALLLFIAVTL

KAG6601085.1 hypothetical protein SDJN03_06318, partial [Cucurbita argyrosperma subsp. sororia]5.1e-6971.03Show/hide
Query:  FAPQNRISFFVSRNPSFRLCLSNAEISANDPLKSEDGFSNHEMEGNNDLLGFTEMRQKSSWLYRKETKIVLALYFFSTLSYWMHQCGLHIRVLDKLRRYG
        F     I+ FVSRNPS R CL NAEISANDPLKSE+GFSNHE EG+ +     E  QK                               I VLDKLRRYG
Subjt:  FAPQNRISFFVSRNPSFRLCLSNAEISANDPLKSEDGFSNHEMEGNNDLLGFTEMRQKSSWLYRKETKIVLALYFFSTLSYWMHQCGLHIRVLDKLRRYG

Query:  ISGILSYGLLNTVYYLTTFLIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTVKYNFESQGKAFMAIVGFCLG
        +SGILSYGLLNTVYYLTTFL+VWFYIAP PAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALA+APFVDRGLSWFTVKYNF+SQGKA +AIVGFCLG
Subjt:  ISGILSYGLLNTVYYLTTFLIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTVKYNFESQGKAFMAIVGFCLG

Query:  LALLLFIAVTLLSA
        L+LLLFIAVTLLSA
Subjt:  LALLLFIAVTLLSA

XP_008445925.1 PREDICTED: uncharacterized protein LOC103488806 isoform X5 [Cucumis melo]4.3e-8475.1Show/hide
Query:  MATSLASFSRIRTNCSRKQFPELPRHFA-PQNRISFFVSRNPSFRLCLSNAEISANDPLKSEDGFSNHEMEGNNDLLGFTEMRQKSSWLYRKETKIVLAL
        MA SLAS SRIR+NCSR QFPELPR F+ PQ+RI F VSRNPS RLCLSNA+ISANDPLKSED FSNHE EG+ +     E RQK     +K  +     
Subjt:  MATSLASFSRIRTNCSRKQFPELPRHFA-PQNRISFFVSRNPSFRLCLSNAEISANDPLKSEDGFSNHEMEGNNDLLGFTEMRQKSSWLYRKETKIVLAL

Query:  YFFSTLSYWMHQCGLHIRVLDKLRRYGISGILSYGLLNTVYYLTTFLIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDR
                          VLDKLRRYG+SGILSYGLLNT YYLTTFL+VWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDR
Subjt:  YFFSTLSYWMHQCGLHIRVLDKLRRYGISGILSYGLLNTVYYLTTFLIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDR

Query:  GLSWFTVKYNFESQGKAFMAIVGFCLGLALLLFIAVTLLSA
        GLSWFTV YNFESQGKAFMAIVGFCLGLALLLFI VTLLSA
Subjt:  GLSWFTVKYNFESQGKAFMAIVGFCLGLALLLFIAVTLLSA

XP_022983937.1 uncharacterized protein LOC111482401 isoform X2 [Cucurbita maxima]5.1e-6972.46Show/hide
Query:  SFFVSRNPSFRLCLSNAEISANDPLKSEDGFSNHEMEGNNDLLGFTEMRQKSSWLYRKETKIVLALYFFSTLSYWMHQCGLHIRVLDKLRRYGISGILSY
        + FVSRNPS R CL+NAEISANDPLKSE GFSNHE EG+       E  +      RK                        I VLDKLRRYG+SGILSY
Subjt:  SFFVSRNPSFRLCLSNAEISANDPLKSEDGFSNHEMEGNNDLLGFTEMRQKSSWLYRKETKIVLALYFFSTLSYWMHQCGLHIRVLDKLRRYGISGILSY

Query:  GLLNTVYYLTTFLIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTVKYNFESQGKAFMAIVGFCLGLALLLFI
        GLLNTVYYLTTFL+VWFYIAPAPAKMGYVAAAGRFLKIMAT+WAGSQVTKLARAAGALA+APFVDRGLSWFTVKYNF+SQGKA +AIVGFCLGL+LLLFI
Subjt:  GLLNTVYYLTTFLIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTVKYNFESQGKAFMAIVGFCLGLALLLFI

Query:  AVTLLSA
        AVTLLSA
Subjt:  AVTLLSA

XP_023534257.1 uncharacterized protein LOC111795864 isoform X2 [Cucurbita pepo subsp. pepo]5.1e-6968.12Show/hide
Query:  SRKQFPELPRHFAPQNRIS----FFVSRNPSFRLCLSNAEISANDPLKSEDGFSNHEMEGNNDLLGFTEMRQKSSWLYRKETKIVLALYFFSTLSYWMHQ
        S K  P+     +P  R+S     FVSRNPS R CL+NAEISANDPLKSE+GFSNHE EG+       E  +      RK                    
Subjt:  SRKQFPELPRHFAPQNRIS----FFVSRNPSFRLCLSNAEISANDPLKSEDGFSNHEMEGNNDLLGFTEMRQKSSWLYRKETKIVLALYFFSTLSYWMHQ

Query:  CGLHIRVLDKLRRYGISGILSYGLLNTVYYLTTFLIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTVKYNFE
            I VLDKLRRYG+SGILSYGLLNTVYYLTTFL+VWFYIAP PAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALA+APFVDRGLSWFTVKYNF+
Subjt:  CGLHIRVLDKLRRYGISGILSYGLLNTVYYLTTFLIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTVKYNFE

Query:  SQGKAFMAIVGFCLGLALLLFIAVTLLSA
        SQGKA +AIVGFCLGL+LLLFIAVTLLSA
Subjt:  SQGKAFMAIVGFCLGLALLLFIAVTLLSA

TrEMBL top hitse value%identityAlignment
A0A1S3BDD7 uncharacterized protein LOC103488806 isoform X52.1e-8475.1Show/hide
Query:  MATSLASFSRIRTNCSRKQFPELPRHFA-PQNRISFFVSRNPSFRLCLSNAEISANDPLKSEDGFSNHEMEGNNDLLGFTEMRQKSSWLYRKETKIVLAL
        MA SLAS SRIR+NCSR QFPELPR F+ PQ+RI F VSRNPS RLCLSNA+ISANDPLKSED FSNHE EG+ +     E RQK     +K  +     
Subjt:  MATSLASFSRIRTNCSRKQFPELPRHFA-PQNRISFFVSRNPSFRLCLSNAEISANDPLKSEDGFSNHEMEGNNDLLGFTEMRQKSSWLYRKETKIVLAL

Query:  YFFSTLSYWMHQCGLHIRVLDKLRRYGISGILSYGLLNTVYYLTTFLIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDR
                          VLDKLRRYG+SGILSYGLLNT YYLTTFL+VWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDR
Subjt:  YFFSTLSYWMHQCGLHIRVLDKLRRYGISGILSYGLLNTVYYLTTFLIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDR

Query:  GLSWFTVKYNFESQGKAFMAIVGFCLGLALLLFIAVTLLSA
        GLSWFTV YNFESQGKAFMAIVGFCLGLALLLFI VTLLSA
Subjt:  GLSWFTVKYNFESQGKAFMAIVGFCLGLALLLFIAVTLLSA

A0A5A7SW01 Uncharacterized protein2.5e-6174.33Show/hide
Query:  ANDPLKSEDGFSNHEMEGNNDLLGFTEMRQKSSWLYRKETKIVLALYFFSTLSYWMHQCGLHIRVLDKLRRYGISGILSYGLLNTVYYLTTFLIVWFYIA
        ANDPLKSED FSNHE EG+ +     E RQK     +K  +                       VLDKLRRYG+SGILSYGLLNT YYLTTFL+VWFYIA
Subjt:  ANDPLKSEDGFSNHEMEGNNDLLGFTEMRQKSSWLYRKETKIVLALYFFSTLSYWMHQCGLHIRVLDKLRRYGISGILSYGLLNTVYYLTTFLIVWFYIA

Query:  PAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTVKYNFESQGKAFMAIVGFCLGLALLLFIAVTLLSA
        PAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTV YNFESQGKAFMAIVGFCLGLALLLFI VTLLSA
Subjt:  PAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTVKYNFESQGKAFMAIVGFCLGLALLLFIAVTLLSA

A0A5D3CXY6 Uncharacterized protein7.3e-6172.73Show/hide
Query:  ANDPLKSEDGFSNHEMEGNNDLLGFTEMRQKSSWLYRKETKIVLALYFFSTLSYWMHQCGLHIRVLDKLRRYGISGILSYGLLNTVYYLTTFLIVWFYIA
        ANDPLKSED FSNHE E         E+      ++   T   + +    +L  ++       +VLDKLRRYG+SGILSYGLLNT YYLTTFL+VWFYIA
Subjt:  ANDPLKSEDGFSNHEMEGNNDLLGFTEMRQKSSWLYRKETKIVLALYFFSTLSYWMHQCGLHIRVLDKLRRYGISGILSYGLLNTVYYLTTFLIVWFYIA

Query:  PAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTVKYNFESQGKAFMAIVGFCLGLALLLFIAVTLLSA
        PAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTV YNFESQGKAFMAIVGFCLGLALLLFI VTLLSA
Subjt:  PAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTVKYNFESQGKAFMAIVGFCLGLALLLFIAVTLLSA

A0A6J1GY06 uncharacterized protein LOC1114582389.5e-6970.56Show/hide
Query:  FAPQNRISFFVSRNPSFRLCLSNAEISANDPLKSEDGFSNHEMEGNNDLLGFTEMRQKSSWLYRKETKIVLALYFFSTLSYWMHQCGLHIRVLDKLRRYG
        F     I+ FVSRNPS R CL+NAEISANDPLKSE+GFSNHE EG+ +     E  QK                               I VLDKLRRYG
Subjt:  FAPQNRISFFVSRNPSFRLCLSNAEISANDPLKSEDGFSNHEMEGNNDLLGFTEMRQKSSWLYRKETKIVLALYFFSTLSYWMHQCGLHIRVLDKLRRYG

Query:  ISGILSYGLLNTVYYLTTFLIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTVKYNFESQGKAFMAIVGFCLG
        +SGILSYGLLNTVYYLTTFL+VWFYIAP PAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALA+APFVDR LSWFTVKYNF+SQGKA +AIVGFCLG
Subjt:  ISGILSYGLLNTVYYLTTFLIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTVKYNFESQGKAFMAIVGFCLG

Query:  LALLLFIAVTLLSA
        L+LLLFIAVTLLSA
Subjt:  LALLLFIAVTLLSA

A0A6J1J0R3 uncharacterized protein LOC111482401 isoform X22.5e-6972.46Show/hide
Query:  SFFVSRNPSFRLCLSNAEISANDPLKSEDGFSNHEMEGNNDLLGFTEMRQKSSWLYRKETKIVLALYFFSTLSYWMHQCGLHIRVLDKLRRYGISGILSY
        + FVSRNPS R CL+NAEISANDPLKSE GFSNHE EG+       E  +      RK                        I VLDKLRRYG+SGILSY
Subjt:  SFFVSRNPSFRLCLSNAEISANDPLKSEDGFSNHEMEGNNDLLGFTEMRQKSSWLYRKETKIVLALYFFSTLSYWMHQCGLHIRVLDKLRRYGISGILSY

Query:  GLLNTVYYLTTFLIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTVKYNFESQGKAFMAIVGFCLGLALLLFI
        GLLNTVYYLTTFL+VWFYIAPAPAKMGYVAAAGRFLKIMAT+WAGSQVTKLARAAGALA+APFVDRGLSWFTVKYNF+SQGKA +AIVGFCLGL+LLLFI
Subjt:  GLLNTVYYLTTFLIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTVKYNFESQGKAFMAIVGFCLGLALLLFI

Query:  AVTLLSA
        AVTLLSA
Subjt:  AVTLLSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G38695.1 unknown protein1.1e-4878.86Show/hide
Query:  VLDKLRRYGISGILSYGLLNTVYYLTTFLIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTVKYNFESQGKAF
        +L KL+RYG+SGILSYGLLNTVYY T FL+VWFY+APAP KMGY+AAA RFLK+MA VWAGSQVTKL R  GA+ALAP VDRGLSWFTVK NFESQGKAF
Subjt:  VLDKLRRYGISGILSYGLLNTVYYLTTFLIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTVKYNFESQGKAF

Query:  MAIVGFCLGLALLLFIAVTLLSA
         A+VG CLG+AL+LFI VTLL A
Subjt:  MAIVGFCLGLALLLFIAVTLLSA

AT2G38695.2 unknown protein3.4e-2677.78Show/hide
Query:  VLDKLRRYGISGILSYGLLNTVYYLTTFLIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAG
        +L KL+RYG+SGILSYGLLNTVYY T FL+VWFY+APAP KMGY+AAA RFLK+MA VWAGSQVTKL R  G
Subjt:  VLDKLRRYGISGILSYGLLNTVYYLTTFLIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAG

AT2G38695.3 unknown protein7.5e-4256.73Show/hide
Query:  VLDKLRRYGISGILSYGLLNTVYYLTTFLIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAG----------------------------
        +L KL+RYG+SGILSYGLLNTVYY T FL+VWFY+APAP KMGY+AAA RFLK+MA VWAGSQVTKL R  G                            
Subjt:  VLDKLRRYGISGILSYGLLNTVYYLTTFLIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAG----------------------------

Query:  --------------------ALALAPFVDRGLSWFTVKYNFESQGKAFMAIVGFCLGLALLLFIAVTLLSA
                            A+ALAP VDRGLSWFTVK NFESQGKAF A+VG CLG+AL+LFI VTLL A
Subjt:  --------------------ALALAPFVDRGLSWFTVKYNFESQGKAFMAIVGFCLGLALLLFIAVTLLSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACATCCCTTGCGTCGTTTTCCCGGATTCGAACGAATTGCAGTCGAAAACAATTTCCAGAGCTTCCCCGCCATTTCGCGCCCCAAAACCGGATAAGCTTTTTTGT
TAGTCGGAACCCTAGCTTCCGACTCTGCCTCAGCAATGCCGAAATTAGTGCCAACGATCCATTGAAATCTGAGGATGGCTTTTCCAATCATGAAATGGAAGGAAACAATG
ATCTTCTTGGCTTTACCGAAATGAGACAAAAATCTTCTTGGCTTTATCGAAAGGAAACAAAGATCGTCTTGGCTTTATATTTCTTCTCGACTTTATCTTATTGGATGCAT
CAATGCGGTCTTCATATTAGGGTACTGGATAAATTGAGGAGATATGGAATTTCTGGAATATTGTCTTACGGATTGTTGAATACAGTCTACTATCTTACAACATTTCTCAT
TGTGTGGTTCTATATTGCACCAGCACCTGCGAAAATGGGCTATGTTGCGGCTGCTGGAAGATTTCTCAAAATAATGGCTACAGTATGGGCTGGAAGCCAAGTTACCAAGC
TTGCAAGAGCTGCAGGGGCTCTTGCTCTGGCACCATTTGTCGACAGAGGATTGTCGTGGTTCACTGTCAAATACAACTTTGAGTCTCAGGGGAAGGCATTTATGGCGATT
GTTGGGTTCTGCTTAGGATTGGCTCTCTTGTTATTCATTGCTGTTACTCTGCTTTCAGCATAA
mRNA sequenceShow/hide mRNA sequence
AAAAAATAGATGAACAATAAAATTAATTAAAAAAAGAATCGAGTTTTTTAAAATTAAAATTCCATTGTTATCATTTTCAAAAATTTAGTTCTCACATTTGATCATCACCT
CTCTCAAATGCTAACTCCACTCAAGCTCACCAATGGCAACATCCCTTGCGTCGTTTTCCCGGATTCGAACGAATTGCAGTCGAAAACAATTTCCAGAGCTTCCCCGCCAT
TTCGCGCCCCAAAACCGGATAAGCTTTTTTGTTAGTCGGAACCCTAGCTTCCGACTCTGCCTCAGCAATGCCGAAATTAGTGCCAACGATCCATTGAAATCTGAGGATGG
CTTTTCCAATCATGAAATGGAAGGAAACAATGATCTTCTTGGCTTTACCGAAATGAGACAAAAATCTTCTTGGCTTTATCGAAAGGAAACAAAGATCGTCTTGGCTTTAT
ATTTCTTCTCGACTTTATCTTATTGGATGCATCAATGCGGTCTTCATATTAGGGTACTGGATAAATTGAGGAGATATGGAATTTCTGGAATATTGTCTTACGGATTGTTG
AATACAGTCTACTATCTTACAACATTTCTCATTGTGTGGTTCTATATTGCACCAGCACCTGCGAAAATGGGCTATGTTGCGGCTGCTGGAAGATTTCTCAAAATAATGGC
TACAGTATGGGCTGGAAGCCAAGTTACCAAGCTTGCAAGAGCTGCAGGGGCTCTTGCTCTGGCACCATTTGTCGACAGAGGATTGTCGTGGTTCACTGTCAAATACAACT
TTGAGTCTCAGGGGAAGGCATTTATGGCGATTGTTGGGTTCTGCTTAGGATTGGCTCTCTTGTTATTCATTGCTGTTACTCTGCTTTCAGCATAA
Protein sequenceShow/hide protein sequence
MATSLASFSRIRTNCSRKQFPELPRHFAPQNRISFFVSRNPSFRLCLSNAEISANDPLKSEDGFSNHEMEGNNDLLGFTEMRQKSSWLYRKETKIVLALYFFSTLSYWMH
QCGLHIRVLDKLRRYGISGILSYGLLNTVYYLTTFLIVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTVKYNFESQGKAFMAI
VGFCLGLALLLFIAVTLLSA