; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G007730 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G007730
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionG-patch domain-containing protein
Genome locationchr04:7231999..7236329
RNA-Seq ExpressionLsi04G007730
SyntenyLsi04G007730
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR039146 - G patch domain and ankyrin repeat-containing protein 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147099.1 G patch domain and ankyrin repeat-containing protein 1 homolog [Cucumis sativus]1.2e-3876.19Show/hide
Query:  MDLESGSGGPVSAAAIDSSNIGF------------------QGRLEPVQASIKNNKRGLGADKVKKKLKETTDIAASDRKNNQECPSLKKAKGLSKRMRK
        MDLESG GG VSAAAIDSSNIGF                  QGRLEPVQAS+KNNKRGLGADKVKKK+KETTD A SDRKNNQE P  KKAKGL+KRMRK
Subjt:  MDLESGSGGPVSAAAIDSSNIGF------------------QGRLEPVQASIKNNKRGLGADKVKKKLKETTDIAASDRKNNQECPSLKKAKGLSKRMRK

Query:  MQEEERLFQEKEFERAFFREFWPDNV
        MQEEERLFQEKEFE+AFFREFWP+NV
Subjt:  MQEEERLFQEKEFERAFFREFWPDNV

XP_008445906.1 PREDICTED: G patch domain and ankyrin repeat-containing protein 1 homolog isoform X2 [Cucumis melo]9.5e-3976.98Show/hide
Query:  MDLESGSGGPVSAAAIDSSNIGF------------------QGRLEPVQASIKNNKRGLGADKVKKKLKETTDIAASDRKNNQECPSLKKAKGLSKRMRK
        MDLESG GG VSAAAIDSSNIGF                  QGRLEPVQAS+KNNKRGLGADKVKKK+KET D AASDRKNNQE P  KK KGLSKRMRK
Subjt:  MDLESGSGGPVSAAAIDSSNIGF------------------QGRLEPVQASIKNNKRGLGADKVKKKLKETTDIAASDRKNNQECPSLKKAKGLSKRMRK

Query:  MQEEERLFQEKEFERAFFREFWPDNV
        MQEEERLFQEKEFERAFFREFWP+NV
Subjt:  MQEEERLFQEKEFERAFFREFWPDNV

XP_016900186.1 PREDICTED: G patch domain and ankyrin repeat-containing protein 1 homolog isoform X1 [Cucumis melo]9.5e-3976.98Show/hide
Query:  MDLESGSGGPVSAAAIDSSNIGF------------------QGRLEPVQASIKNNKRGLGADKVKKKLKETTDIAASDRKNNQECPSLKKAKGLSKRMRK
        MDLESG GG VSAAAIDSSNIGF                  QGRLEPVQAS+KNNKRGLGADKVKKK+KET D AASDRKNNQE P  KK KGLSKRMRK
Subjt:  MDLESGSGGPVSAAAIDSSNIGF------------------QGRLEPVQASIKNNKRGLGADKVKKKLKETTDIAASDRKNNQECPSLKKAKGLSKRMRK

Query:  MQEEERLFQEKEFERAFFREFWPDNV
        MQEEERLFQEKEFERAFFREFWP+NV
Subjt:  MQEEERLFQEKEFERAFFREFWPDNV

XP_022945156.1 G patch domain and ankyrin repeat-containing protein 1 homolog [Cucurbita moschata]7.5e-3674.6Show/hide
Query:  MDLESGSGGPVSAAAIDSSNIGF------------------QGRLEPVQASIKNNKRGLGADKVKKKLKETTDIAASDRKNNQECPSLKKAKGLSKRMRK
        MDLESGSGG VSA AIDSSNIGF                  QGRLEPVQ S+KNNKRGLGADKVKKKLKETTDIAASD K NQE P  KKAK +SK+MRK
Subjt:  MDLESGSGGPVSAAAIDSSNIGF------------------QGRLEPVQASIKNNKRGLGADKVKKKLKETTDIAASDRKNNQECPSLKKAKGLSKRMRK

Query:  MQEEERLFQEKEFERAFFREFWPDNV
        M EEERLF+EKEFERAFFREFWPDNV
Subjt:  MQEEERLFQEKEFERAFFREFWPDNV

XP_038891672.1 protein PXR1 [Benincasa hispida]6.1e-3878.57Show/hide
Query:  MDLESGSGGPVSAAAIDSSNIGF------------------QGRLEPVQASIKNNKRGLGADKVKKKLKETTDIAASDRKNNQECPSLKKAKGLSKRMRK
        MDLE GSGG VSAAAIDSSNIGF                  QGRLEPVQASIKNNKRGLGADKVKKKLKETTDIAASDRKNNQ      KAKGLSKRMRK
Subjt:  MDLESGSGGPVSAAAIDSSNIGF------------------QGRLEPVQASIKNNKRGLGADKVKKKLKETTDIAASDRKNNQECPSLKKAKGLSKRMRK

Query:  MQEEERLFQEKEFERAFFREFWPDNV
        MQEEERLFQEKEFERAFFREFWP+NV
Subjt:  MQEEERLFQEKEFERAFFREFWPDNV

TrEMBL top hitse value%identityAlignment
A0A0A0KPR8 G-patch domain-containing protein6.0e-3976.19Show/hide
Query:  MDLESGSGGPVSAAAIDSSNIGF------------------QGRLEPVQASIKNNKRGLGADKVKKKLKETTDIAASDRKNNQECPSLKKAKGLSKRMRK
        MDLESG GG VSAAAIDSSNIGF                  QGRLEPVQAS+KNNKRGLGADKVKKK+KETTD A SDRKNNQE P  KKAKGL+KRMRK
Subjt:  MDLESGSGGPVSAAAIDSSNIGF------------------QGRLEPVQASIKNNKRGLGADKVKKKLKETTDIAASDRKNNQECPSLKKAKGLSKRMRK

Query:  MQEEERLFQEKEFERAFFREFWPDNV
        MQEEERLFQEKEFE+AFFREFWP+NV
Subjt:  MQEEERLFQEKEFERAFFREFWPDNV

A0A1S3BEH2 G patch domain and ankyrin repeat-containing protein 1 homolog isoform X24.6e-3976.98Show/hide
Query:  MDLESGSGGPVSAAAIDSSNIGF------------------QGRLEPVQASIKNNKRGLGADKVKKKLKETTDIAASDRKNNQECPSLKKAKGLSKRMRK
        MDLESG GG VSAAAIDSSNIGF                  QGRLEPVQAS+KNNKRGLGADKVKKK+KET D AASDRKNNQE P  KK KGLSKRMRK
Subjt:  MDLESGSGGPVSAAAIDSSNIGF------------------QGRLEPVQASIKNNKRGLGADKVKKKLKETTDIAASDRKNNQECPSLKKAKGLSKRMRK

Query:  MQEEERLFQEKEFERAFFREFWPDNV
        MQEEERLFQEKEFERAFFREFWP+NV
Subjt:  MQEEERLFQEKEFERAFFREFWPDNV

A0A1S4DW19 G patch domain and ankyrin repeat-containing protein 1 homolog isoform X14.6e-3976.98Show/hide
Query:  MDLESGSGGPVSAAAIDSSNIGF------------------QGRLEPVQASIKNNKRGLGADKVKKKLKETTDIAASDRKNNQECPSLKKAKGLSKRMRK
        MDLESG GG VSAAAIDSSNIGF                  QGRLEPVQAS+KNNKRGLGADKVKKK+KET D AASDRKNNQE P  KK KGLSKRMRK
Subjt:  MDLESGSGGPVSAAAIDSSNIGF------------------QGRLEPVQASIKNNKRGLGADKVKKKLKETTDIAASDRKNNQECPSLKKAKGLSKRMRK

Query:  MQEEERLFQEKEFERAFFREFWPDNV
        MQEEERLFQEKEFERAFFREFWP+NV
Subjt:  MQEEERLFQEKEFERAFFREFWPDNV

A0A6J1CAQ8 G patch domain and ankyrin repeat-containing protein 1 homolog1.1e-3572.22Show/hide
Query:  MDLESGSGGPVSAAAIDSSNIGF------------------QGRLEPVQASIKNNKRGLGADKVKKKLKETTDIAASDRKNNQECPSLKKAKGLSKRMRK
        M+ ES SGG VSA AIDSSNIGF                  QGRLEPVQ S+KNNKRGLGADKVKKKLKET DIAASDRKNNQE P  KK K LSK  RK
Subjt:  MDLESGSGGPVSAAAIDSSNIGF------------------QGRLEPVQASIKNNKRGLGADKVKKKLKETTDIAASDRKNNQECPSLKKAKGLSKRMRK

Query:  MQEEERLFQEKEFERAFFREFWPDNV
        MQEE+R+FQEKEFERAFFREFWPDNV
Subjt:  MQEEERLFQEKEFERAFFREFWPDNV

A0A6J1G054 G patch domain and ankyrin repeat-containing protein 1 homolog3.6e-3674.6Show/hide
Query:  MDLESGSGGPVSAAAIDSSNIGF------------------QGRLEPVQASIKNNKRGLGADKVKKKLKETTDIAASDRKNNQECPSLKKAKGLSKRMRK
        MDLESGSGG VSA AIDSSNIGF                  QGRLEPVQ S+KNNKRGLGADKVKKKLKETTDIAASD K NQE P  KKAK +SK+MRK
Subjt:  MDLESGSGGPVSAAAIDSSNIGF------------------QGRLEPVQASIKNNKRGLGADKVKKKLKETTDIAASDRKNNQECPSLKKAKGLSKRMRK

Query:  MQEEERLFQEKEFERAFFREFWPDNV
        M EEERLF+EKEFERAFFREFWPDNV
Subjt:  MQEEERLFQEKEFERAFFREFWPDNV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52350.1 D111/G-patch domain-containing protein1.1e-1144.35Show/hide
Query:  AAAIDSSNIGF------------------QGRLEPVQASIKNNKRGLGADK-VKKKLKETTDIAASDRKNNQECPSLKKAKGLSKRMRKMQEEERLFQEK
        + AI SSNIGF                  QG L P+QA  K+NK+GLGA+K  K+K  +  D A  +          KK+K LSK++ KM E E+   E 
Subjt:  AAAIDSSNIGF------------------QGRLEPVQASIKNNKRGLGADK-VKKKLKETTDIAASDRKNNQECPSLKKAKGLSKRMRKMQEEERLFQEK

Query:  EFERAFFREFWPDNV
        EFERAF REFWPDNV
Subjt:  EFERAFFREFWPDNV

AT5G08535.1 D111/G-patch domain-containing protein1.6e-1547.5Show/hide
Query:  SGGPVSAAAIDSSNIGF------------------QGRLEPVQASIKNNKRGLGADKVKKKLKETTDIAASDRKNNQECPSLKKAKGLSKRMRKMQEEER
        SG   S AAI+SSNIGF                  QG L P+QA  K+NKRG+GA +  K+      +A    K+ +     K++K LSK+MRKM E E+
Subjt:  SGGPVSAAAIDSSNIGF------------------QGRLEPVQASIKNNKRGLGADKVKKKLKETTDIAASDRKNNQECPSLKKAKGLSKRMRKMQEEER

Query:  LFQEKEFERAFFREFWPDNV
          QEKEFERAFFREFWPDNV
Subjt:  LFQEKEFERAFFREFWPDNV

AT5G08535.2 D111/G-patch domain-containing protein1.6e-1547.5Show/hide
Query:  SGGPVSAAAIDSSNIGF------------------QGRLEPVQASIKNNKRGLGADKVKKKLKETTDIAASDRKNNQECPSLKKAKGLSKRMRKMQEEER
        SG   S AAI+SSNIGF                  QG L P+QA  K+NKRG+GA +  K+      +A    K+ +     K++K LSK+MRKM E E+
Subjt:  SGGPVSAAAIDSSNIGF------------------QGRLEPVQASIKNNKRGLGADKVKKKLKETTDIAASDRKNNQECPSLKKAKGLSKRMRKMQEEER

Query:  LFQEKEFERAFFREFWPDNV
          QEKEFERAFFREFWPDNV
Subjt:  LFQEKEFERAFFREFWPDNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTGGAGTCGGGCTCGGGGGGCCCTGTTTCTGCTGCAGCCATCGATTCTTCGAACATAGGGTTTCAGGGTAGGTTGGAACCCGTCCAGGCATCTATAAAGAATAA
CAAACGAGGTTTGGGAGCAGATAAAGTGAAGAAGAAGCTTAAAGAAACTACCGATATTGCAGCCTCTGATAGGAAAAATAACCAGGAATGTCCTTCTCTAAAGAAAGCGA
AGGGGCTGTCAAAAAGGATGAGGAAGATGCAAGAGGAAGAGAGGCTATTCCAAGAGAAGGAATTTGAGCGAGCATTTTTTAGGGAATTTTGGCCAGACAATGTTTGA
mRNA sequenceShow/hide mRNA sequence
GGATGCTCAAAGTCTAAATAGAGTGAATTTAGCTTAATCAAAGTCTTCGAAGTTTGCATTTGCACGGCGTCATCCGTTTTTCAGGATCAAGAACAAGGAAAAAGGTTGAA
GACTTGGCACGCTAGGGCTAGGTGAAAGTGCGAAAGTTCTACAAGTTTCGAATTGGGTTAGGGTTTGGCAACAATCTCCACTGGACCTCAAGATTGCCCAGAAGTTCTTT
TCAGGAGGAAGGATGGATTTGGAGTCGGGCTCGGGGGGCCCTGTTTCTGCTGCAGCCATCGATTCTTCGAACATAGGGTTTCAGGGTAGGTTGGAACCCGTCCAGGCATC
TATAAAGAATAACAAACGAGGTTTGGGAGCAGATAAAGTGAAGAAGAAGCTTAAAGAAACTACCGATATTGCAGCCTCTGATAGGAAAAATAACCAGGAATGTCCTTCTC
TAAAGAAAGCGAAGGGGCTGTCAAAAAGGATGAGGAAGATGCAAGAGGAAGAGAGGCTATTCCAAGAGAAGGAATTTGAGCGAGCATTTTTTAGGGAATTTTGGCCAGAC
AATGTTTGATACATTAAACTCCCAGTGTACAAATTCAGATTGTTAGTCACAAAAGCCTTCTTTTTTTTTTTTAGTTATGGCTTTAAAGCAGTCAGCATTCACCAAAGTAG
TCTGTAAATATGATTACACCAAGCAAAGTTATGAAATTTAATCTTGTTTAGTGTTAGTTATATTTATACCTTTTAATTTTTATGAGCCTTAATAAAATGTCTTGTTTCAT
GATTATTAAAGAAGATTTAATTATTGTACAATATTATTATTATTAGTTTTTTTCTGGGGTTGTTTTCTTCGACTTAGCATATAGAATGTAAAAAAGTTATTGGGCTATGC
TAATGTTGACATAATATTATTATTATTA
Protein sequenceShow/hide protein sequence
MDLESGSGGPVSAAAIDSSNIGFQGRLEPVQASIKNNKRGLGADKVKKKLKETTDIAASDRKNNQECPSLKKAKGLSKRMRKMQEEERLFQEKEFERAFFREFWPDNV