; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G008160 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G008160
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
Genome locationchr04:7762090..7764737
RNA-Seq ExpressionLsi04G008160
SyntenyLsi04G008160
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034049.1 putative RNA-binding protein ARP1 isoform X1 [Cucumis melo var. makuwa]8.4e-13187Show/hide
Query:  MTMI--TSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASL
        MTM+  T+N+  NAGLFGDTTLTKVFVGGLAWETPKEAMRDHF+KFG+ILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASL
Subjt:  MTMI--TSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASL

Query:  GARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHNDIYSKNFDVFCDEQKLGY
        GARRGGSRSASATPPQ PQPGSNGGGPRTT+ A APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNH               KLGY
Subjt:  GARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHNDIYSKNFDVFCDEQKLGY

Query:  MNGHYTQMYPGQ-AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNPGPFYS
        +NGHYTQMYPGQ AMVG NTLMPMYPLYHYHQSHAMGMPAHIFPPSPT+AGPFAAVPPTSIMSKP +VGPNPGPF++
Subjt:  MNGHYTQMYPGQ-AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNPGPFYS

XP_004143608.1 probable RNA-binding protein ARP1 isoform X1 [Cucumis sativus]1.9e-13087.64Show/hide
Query:  MTMIT-----SNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
        MTM+T     +N++ NAGLFGDTTLTKVFVGGLAWETPKEAMRDHF KFG+ILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
Subjt:  MTMIT-----SNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL

Query:  ASLGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHNDIYSKNFDVFCDEQK
        ASLGARRGGSRSASATPPQ PQPGSN GGPRTTS A APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNH               K
Subjt:  ASLGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHNDIYSKNFDVFCDEQK

Query:  LGYMNGHYTQMYPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNPG
        LGYMNGHYTQMYPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPT+AGPFAAVPPTSIMSKP +VGPNPG
Subjt:  LGYMNGHYTQMYPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNPG

XP_011654915.1 probable RNA-binding protein ARP1 isoform X2 [Cucumis sativus]9.3e-13087.59Show/hide
Query:  MTMIT-----SNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
        MTM+T     +N++ NAGLFGDTTLTKVFVGGLAWETPKEAMRDHF KFG+ILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
Subjt:  MTMIT-----SNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL

Query:  ASLGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHNDIYSKNFDVFCDEQK
        ASLGARRGGSRSASATPPQ PQPGSN GGPRTTS A APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNH               K
Subjt:  ASLGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHNDIYSKNFDVFCDEQK

Query:  LGYMNGHYTQMYPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNP
        LGYMNGHYTQMYPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPT+AGPFAAVPPTSIMSKP +VGPNP
Subjt:  LGYMNGHYTQMYPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNP

XP_038891949.1 probable RNA-binding protein ARP1 isoform X1 [Benincasa hispida]1.2e-13289.63Show/hide
Query:  MTMITSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGA
        M+  T++N NNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFG+ILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGA
Subjt:  MTMITSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGA

Query:  RRGGSRSASATPPQGPQPGSNGGGPRTTS-PAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHNDIYSKNFDVFCDEQKLGYMN
        RRGGSRSASATPPQ PQPGSNGGGPRTTS  A PGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNH               KLGYMN
Subjt:  RRGGSRSASATPPQGPQPGSNGGGPRTTS-PAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHNDIYSKNFDVFCDEQKLGYMN

Query:  GHYTQMYPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNPG
        GHYTQMYPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPT+AGPFAAVPP+SIMSKPASVGPNPG
Subjt:  GHYTQMYPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNPG

XP_038891950.1 probable RNA-binding protein ARP1 isoform X2 [Benincasa hispida]5.8e-13289.59Show/hide
Query:  MTMITSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGA
        M+  T++N NNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFG+ILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGA
Subjt:  MTMITSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGA

Query:  RRGGSRSASATPPQGPQPGSNGGGPRTTS-PAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHNDIYSKNFDVFCDEQKLGYMN
        RRGGSRSASATPPQ PQPGSNGGGPRTTS  A PGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNH               KLGYMN
Subjt:  RRGGSRSASATPPQGPQPGSNGGGPRTTS-PAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHNDIYSKNFDVFCDEQKLGYMN

Query:  GHYTQMYPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNP
        GHYTQMYPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPT+AGPFAAVPP+SIMSKPASVGPNP
Subjt:  GHYTQMYPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNP

TrEMBL top hitse value%identityAlignment
A0A0A0KNL6 RRM domain-containing protein9.1e-13187.64Show/hide
Query:  MTMIT-----SNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
        MTM+T     +N++ NAGLFGDTTLTKVFVGGLAWETPKEAMRDHF KFG+ILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL
Subjt:  MTMIT-----SNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNL

Query:  ASLGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHNDIYSKNFDVFCDEQK
        ASLGARRGGSRSASATPPQ PQPGSN GGPRTTS A APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNH               K
Subjt:  ASLGARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHNDIYSKNFDVFCDEQK

Query:  LGYMNGHYTQMYPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNPG
        LGYMNGHYTQMYPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPT+AGPFAAVPPTSIMSKP +VGPNPG
Subjt:  LGYMNGHYTQMYPGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNPG

A0A1S3BD62 probable RNA-binding protein ARP1 isoform X25.0e-12987.87Show/hide
Query:  MTMI--TSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASL
        MTM+  T+N+  NAGLFGDTTLTKVFVGGLAWETPKEAMRDHF+KFG+ILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASL
Subjt:  MTMI--TSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASL

Query:  GARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHNDIYSKNFDVFCDEQKLGY
        GARRGGSRSASATPPQ PQPGSNGGGPRTT+ A APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNH               KLGY
Subjt:  GARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHNDIYSKNFDVFCDEQKLGY

Query:  MNGHYTQMYPGQ-AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNP
        +NGHYTQMYPGQ AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPT+AGPFAAVPPTSIMSKP +VGPNP
Subjt:  MNGHYTQMYPGQ-AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNP

A0A1S3BEI0 probable RNA-binding protein ARP1 isoform X11.0e-12987.91Show/hide
Query:  MTMI--TSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASL
        MTM+  T+N+  NAGLFGDTTLTKVFVGGLAWETPKEAMRDHF+KFG+ILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASL
Subjt:  MTMI--TSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASL

Query:  GARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHNDIYSKNFDVFCDEQKLGY
        GARRGGSRSASATPPQ PQPGSNGGGPRTT+ A APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNH               KLGY
Subjt:  GARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHNDIYSKNFDVFCDEQKLGY

Query:  MNGHYTQMYPGQ-AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNPG
        +NGHYTQMYPGQ AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPT+AGPFAAVPPTSIMSKP +VGPNPG
Subjt:  MNGHYTQMYPGQ-AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNPG

A0A5A7SY01 Putative RNA-binding protein ARP1 isoform X14.1e-13187Show/hide
Query:  MTMI--TSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASL
        MTM+  T+N+  NAGLFGDTTLTKVFVGGLAWETPKEAMRDHF+KFG+ILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASL
Subjt:  MTMI--TSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASL

Query:  GARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHNDIYSKNFDVFCDEQKLGY
        GARRGGSRSASATPPQ PQPGSNGGGPRTT+ A APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNH               KLGY
Subjt:  GARRGGSRSASATPPQGPQPGSNGGGPRTTSPA-APGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHNDIYSKNFDVFCDEQKLGY

Query:  MNGHYTQMYPGQ-AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNPGPFYS
        +NGHYTQMYPGQ AMVG NTLMPMYPLYHYHQSHAMGMPAHIFPPSPT+AGPFAAVPPTSIMSKP +VGPNPGPF++
Subjt:  MNGHYTQMYPGQ-AMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNPGPFYS

A0A6J1H1A2 probable RNA-binding protein ARP1 isoform X41.1e-12087.26Show/hide
Query:  LFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPP
        +FGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVII+DKLTGRSKGYGFVTFK+AESAKKACEDSAPIINGRRANCNLASLGARR  SRSASATPP
Subjt:  LFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPP

Query:  QGPQPGSNGGGPRTTSPAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHNDIYSKNFDVFCDEQKLGYMN-GHYTQMYPGQAMV
        QGPQPGSNGG PRTTS AA GNHVQWYYPAGTHPT FHHQPHQ VPFYGYSPSPTYIATDISYNH              QK+GYMN G Y Q+YPGQAMV
Subjt:  QGPQPGSNGGGPRTTSPAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHNDIYSKNFDVFCDEQKLGYMN-GHYTQMYPGQAMV

Query:  GANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNPGPF
        GANTLMPMYP+YHYHQS AMGMPAHIFPPSPT+AGPFA VPPTSIMSKPASVGPNPGPF
Subjt:  GANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNPGPF

SwissProt top hitse value%identityAlignment
Q5ZJX4 RNA-binding protein 381.3e-2258.82Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR
        DTT TK+FVGGL + T   ++R +FE FGDI EAV+I+D+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR

Q5ZMA3 RNA-binding protein 241.8e-2258.82Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR
        DTT TK+FVGGL + T   ++R +FE FGDI EAV+I+D+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR

Q6GQD3 RNA-binding protein 24-A1.8e-2258.82Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR
        DTT TK+FVGGL + T   ++R +FE FGDI EAV+I+D+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR

Q9I8B3 RNA-binding protein 24-B1.8e-2258.82Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR
        DTT TK+FVGGL + T   ++R +FE FGDI EAV+I+D+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR

Q9M1S3 Probable RNA-binding protein ARP19.2e-5650.9Show/hide
Query:  MITSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARR
        M TSNN N  G FGDT LTKVFVGGLAW+T KEAM DHF K+GDILEAVIISDKLT RSKGYGFVTFKDA++A +ACEDS PIINGRRANCNLASLG R 
Subjt:  MITSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARR

Query:  GGSRSASATPPQGPQPGSNGGGPRTTSPAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHNDIYSKNFDVFCDEQKLG-----Y
          S + + +P QGP+ G+        +P   GNH QWYYP+G        Q HQ VPFYGY PS  Y+A ++++N               QK+G     Y
Subjt:  GGSRSASATPPQGPQPGSNGGGPRTTSPAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHNDIYSKNFDVFCDEQKLG-----Y

Query:  MNGHYTQMYP------------------GQAMVG-ANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFA-AVPPTS
        MNG+Y QM P                  G+ MVG A+ ++P Y +Y YHQS A+G       P P+ + P + + PP S
Subjt:  MNGHYTQMYP------------------GQAMVG-ANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFA-AVPPTS

Arabidopsis top hitse value%identityAlignment
AT1G22910.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.8e-3742.8Show/hide
Query:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQG
        GDTT TKVFVGGLAWET KE M+ HFE+FG+ILEAV+I+DK +GRSKGYGFVTF++AE+A+ AC D+ P+I+GRRANCNLASLG +    RS  +TP   
Subjt:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQG

Query:  PQPGSNGGGPRTTSPAAPGNHVQWYY--PAGTHPTPFHHQPHQPVPFYGYSP-SPTY--IATDISYNHNDIYSKNFDVFCDEQK----LGYMNGHYTQMY
            ++GGG R  +     + +Q  +  P    P  F H PH P+  +GYSP SP Y    T++   +       + V+ +       L       T  Y
Subjt:  PQPGSNGGGPRTTSPAAPGNHVQWYY--PAGTHPTPFHHQPHQPVPFYGYSP-SPTY--IATDISYNHNDIYSKNFDVFCDEQK----LGYMNGHYTQMY

Query:  PGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPS
        P     G        P YH+  S+    P H  PP+
Subjt:  PGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPS

AT1G22910.2 RNA-binding (RRM/RBD/RNP motifs) family protein5.8e-3742.8Show/hide
Query:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQG
        GDTT TKVFVGGLAWET KE M+ HFE+FG+ILEAV+I+DK +GRSKGYGFVTF++AE+A+ AC D+ P+I+GRRANCNLASLG +    RS  +TP   
Subjt:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQG

Query:  PQPGSNGGGPRTTSPAAPGNHVQWYY--PAGTHPTPFHHQPHQPVPFYGYSP-SPTY--IATDISYNHNDIYSKNFDVFCDEQK----LGYMNGHYTQMY
            ++GGG R  +     + +Q  +  P    P  F H PH P+  +GYSP SP Y    T++   +       + V+ +       L       T  Y
Subjt:  PQPGSNGGGPRTTSPAAPGNHVQWYY--PAGTHPTPFHHQPHQPVPFYGYSP-SPTY--IATDISYNHNDIYSKNFDVFCDEQK----LGYMNGHYTQMY

Query:  PGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPS
        P     G        P YH+  S+    P H  PP+
Subjt:  PGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPS

AT1G22910.3 RNA-binding (RRM/RBD/RNP motifs) family protein5.8e-3742.8Show/hide
Query:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQG
        GDTT TKVFVGGLAWET KE M+ HFE+FG+ILEAV+I+DK +GRSKGYGFVTF++AE+A+ AC D+ P+I+GRRANCNLASLG +    RS  +TP   
Subjt:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQG

Query:  PQPGSNGGGPRTTSPAAPGNHVQWYY--PAGTHPTPFHHQPHQPVPFYGYSP-SPTY--IATDISYNHNDIYSKNFDVFCDEQK----LGYMNGHYTQMY
            ++GGG R  +     + +Q  +  P    P  F H PH P+  +GYSP SP Y    T++   +       + V+ +       L       T  Y
Subjt:  PQPGSNGGGPRTTSPAAPGNHVQWYY--PAGTHPTPFHHQPHQPVPFYGYSP-SPTY--IATDISYNHNDIYSKNFDVFCDEQK----LGYMNGHYTQMY

Query:  PGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPS
        P     G        P YH+  S+    P H  PP+
Subjt:  PGQAMVGANTLMPMYPLYHYHQSHAMGMPAHIFPPS

AT3G54770.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.6e-5750.9Show/hide
Query:  MITSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARR
        M TSNN N  G FGDT LTKVFVGGLAW+T KEAM DHF K+GDILEAVIISDKLT RSKGYGFVTFKDA++A +ACEDS PIINGRRANCNLASLG R 
Subjt:  MITSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARR

Query:  GGSRSASATPPQGPQPGSNGGGPRTTSPAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHNDIYSKNFDVFCDEQKLG-----Y
          S + + +P QGP+ G+        +P   GNH QWYYP+G        Q HQ VPFYGY PS  Y+A ++++N               QK+G     Y
Subjt:  GGSRSASATPPQGPQPGSNGGGPRTTSPAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHNDIYSKNFDVFCDEQKLG-----Y

Query:  MNGHYTQMYP------------------GQAMVG-ANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFA-AVPPTS
        MNG+Y QM P                  G+ MVG A+ ++P Y +Y YHQS A+G       P P+ + P + + PP S
Subjt:  MNGHYTQMYP------------------GQAMVG-ANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFA-AVPPTS

AT3G54770.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.3e-4146.12Show/hide
Query:  MRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQGPQPGSNGGGPRTTSPAAPGNH
        M DHF K+GDILEAVIISDKLT RSKGYGFVTFKDA++A +ACEDS PIINGRRANCNLASLG R        ATPP                    GNH
Subjt:  MRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASATPPQGPQPGSNGGGPRTTSPAAPGNH

Query:  VQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHNDIYSKNFDVFCDEQKLG-----YMNGHYTQMYP------------------GQAMVG
         QWYYP+G        Q HQ VPFYGY PS  Y+A ++++N               QK+G     YMNG+Y QM P                  G+ MVG
Subjt:  VQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHNDIYSKNFDVFCDEQKLG-----YMNGHYTQMYP------------------GQAMVG

Query:  -ANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFA-AVPPTS
         A+ ++P Y +Y YHQS A+G       P P+ + P + + PP S
Subjt:  -ANTLMPMYPLYHYHQSHAMGMPAHIFPPSPTSAGPFA-AVPPTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCATGATCACCAGCAATAATACTAATAATGCAGGTTTGTTCGGCGACACCACCTTGACGAAGGTCTTCGTTGGGGGATTAGCTTGGGAGACTCCAAAGGAAGCCAT
GAGAGATCACTTCGAGAAGTTTGGTGACATTCTGGAGGCGGTTATCATTTCCGATAAACTCACCGGCAGATCCAAGGGCTATGGATTCGTTACATTCAAGGACGCGGAAT
CGGCCAAGAAAGCTTGTGAGGATTCGGCTCCGATCATCAATGGCCGTCGAGCTAACTGTAATCTGGCTTCGCTTGGAGCTCGGCGCGGCGGCTCTAGGTCGGCTTCGGCT
ACTCCTCCCCAAGGTCCTCAACCAGGATCCAACGGTGGAGGACCGAGGACGACGTCACCAGCCGCACCGGGAAATCACGTGCAGTGGTACTACCCGGCGGGGACTCATCC
CACGCCGTTTCATCATCAGCCTCATCAGCCCGTCCCTTTCTATGGATACTCCCCAAGCCCCACTTACATCGCCACCGATATCAGTTACAACCACAATGATATATATAGTA
AAAACTTCGACGTTTTTTGTGATGAACAGAAGCTGGGGTATATGAACGGGCATTACACGCAGATGTATCCAGGGCAGGCTATGGTAGGGGCGAACACATTGATGCCAATG
TACCCGCTGTATCATTACCATCAATCACACGCGATGGGGATGCCGGCCCACATTTTCCCTCCTAGTCCCACGTCGGCGGGCCCATTCGCCGCAGTCCCACCTACTTCCAT
TATGTCCAAACCGGCCTCCGTTGGTCCCAACCCAGGTCCATTTTACTCGTACCTTACGTGGATGTTTGGGTCTGATTTTAAAAGCGTCTCCTCCCCCACTGCCAACTGGC
TTCACTGGGTCCCACGTGGCCAGCTTGATTCGCCGGTCGTACAGTTGGAGGAGGATGCAGGGGATGATGATGATGATGATGGTAAAAGAAGAGCAGAGAAGAATTAA
mRNA sequenceShow/hide mRNA sequence
TGATGATAGCCTTGGGCAATTGCCTATCTGTCAGCCTCTCTGTCTCTCTGTCTTCTTCCATTTCTTTATTTCCATACCACTCTGTTTCTTCACAACACTTCCCTTCTTCT
TATTTAACCTTCTTCTTCTCTTTCCCATCACCATTTTTCTCCTTCACTTACTTATATAATTAATTACTTCAACCTTTTCCTTCAATTTCTCTTTCGATTTCATTCAACTT
GCTGTTTTGTTGGATTCCGCTGCAAAACTCCCACACTATGACCATGATCACCAGCAATAATACTAATAATGCAGGTTTGTTCGGCGACACCACCTTGACGAAGGTCTTCG
TTGGGGGATTAGCTTGGGAGACTCCAAAGGAAGCCATGAGAGATCACTTCGAGAAGTTTGGTGACATTCTGGAGGCGGTTATCATTTCCGATAAACTCACCGGCAGATCC
AAGGGCTATGGATTCGTTACATTCAAGGACGCGGAATCGGCCAAGAAAGCTTGTGAGGATTCGGCTCCGATCATCAATGGCCGTCGAGCTAACTGTAATCTGGCTTCGCT
TGGAGCTCGGCGCGGCGGCTCTAGGTCGGCTTCGGCTACTCCTCCCCAAGGTCCTCAACCAGGATCCAACGGTGGAGGACCGAGGACGACGTCACCAGCCGCACCGGGAA
ATCACGTGCAGTGGTACTACCCGGCGGGGACTCATCCCACGCCGTTTCATCATCAGCCTCATCAGCCCGTCCCTTTCTATGGATACTCCCCAAGCCCCACTTACATCGCC
ACCGATATCAGTTACAACCACAATGATATATATAGTAAAAACTTCGACGTTTTTTGTGATGAACAGAAGCTGGGGTATATGAACGGGCATTACACGCAGATGTATCCAGG
GCAGGCTATGGTAGGGGCGAACACATTGATGCCAATGTACCCGCTGTATCATTACCATCAATCACACGCGATGGGGATGCCGGCCCACATTTTCCCTCCTAGTCCCACGT
CGGCGGGCCCATTCGCCGCAGTCCCACCTACTTCCATTATGTCCAAACCGGCCTCCGTTGGTCCCAACCCAGGTCCATTTTACTCGTACCTTACGTGGATGTTTGGGTCT
GATTTTAAAAGCGTCTCCTCCCCCACTGCCAACTGGCTTCACTGGGTCCCACGTGGCCAGCTTGATTCGCCGGTCGTACAGTTGGAGGAGGATGCAGGGGATGATGATGA
TGATGATGGTAAAAGAAGAGCAGAGAAGAATTAAGTATAAAAAGGGGCCAGGCAGGCAGGCTAAGAGGGATTCTATTTTTTTTTTTTTTTTTAATTTTTAATCTGAACAT
CTCATTCTCTTAGTACATGGCAGGCAAGAAAAAAAACGGAAAAAAAAAAAGAAGAAAAATAACAGAGACAATGTGAAGCTGGTTGGGGGGCTGCTCAGAACTACATTATT
TTAGGCTGATCTGTTGTAGCTCTTTATTTATTTCTTTCTTCTTTTAATTATAAACTAATTTTATTGTTATTTCCCT
Protein sequenceShow/hide protein sequence
MTMITSNNTNNAGLFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIISDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRGGSRSASA
TPPQGPQPGSNGGGPRTTSPAAPGNHVQWYYPAGTHPTPFHHQPHQPVPFYGYSPSPTYIATDISYNHNDIYSKNFDVFCDEQKLGYMNGHYTQMYPGQAMVGANTLMPM
YPLYHYHQSHAMGMPAHIFPPSPTSAGPFAAVPPTSIMSKPASVGPNPGPFYSYLTWMFGSDFKSVSSPTANWLHWVPRGQLDSPVVQLEEDAGDDDDDDGKRRAEKN