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Lsi04G008600 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G008600
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDUF674 family protein
Genome locationchr04:8407772..8409007
RNA-Seq ExpressionLsi04G008600
SyntenyLsi04G008600
Gene Ontology termsNA
InterPro domainsIPR007750 - Protein of unknown function DUF674


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601015.1 60S ribosomal protein L23a, partial [Cucurbita argyrosperma subsp. sororia]3.3e-0565.79Show/hide
Query:  TKGQRVLFGEADKTVVDFLFHLLALPLGTGVELLKASL
        +KG+RV+FGEADK V+DFLFHLL+LPLGT  +LL+  +
Subjt:  TKGQRVLFGEADKTVVDFLFHLLALPLGTGVELLKASL

XP_004147725.1 uncharacterized protein LOC101208014 [Cucumis sativus]3.6e-0474.29Show/hide
Query:  TKGQRVLFGEADKTVVDFLFHLLALPLGTGVELLK
        TK QRVLFGEADK  +DF+F+LL+LPLGT V LLK
Subjt:  TKGQRVLFGEADKTVVDFLFHLLALPLGTGVELLK

XP_022138964.1 uncharacterized protein LOC111010013 [Momordica charantia]1.3e-0474.29Show/hide
Query:  TKGQRVLFGEADKTVVDFLFHLLALPLGTGVELLK
        +K QRVLFGEADK V+DFLF+LL+LPLGT + LLK
Subjt:  TKGQRVLFGEADKTVVDFLFHLLALPLGTGVELLK

XP_022957255.1 uncharacterized protein LOC111458695 [Cucurbita moschata]3.3e-0565.79Show/hide
Query:  TKGQRVLFGEADKTVVDFLFHLLALPLGTGVELLKASL
        +KG+RV+FGEADK V+DFLFHLL+LPLGT  +LL+  +
Subjt:  TKGQRVLFGEADKTVVDFLFHLLALPLGTGVELLKASL

XP_023548481.1 uncharacterized protein LOC111807128 [Cucurbita pepo subsp. pepo]3.3e-0565.79Show/hide
Query:  TKGQRVLFGEADKTVVDFLFHLLALPLGTGVELLKASL
        +KG+RV+FGEADK V+DFLFHLL+LPLGT  +LL+  +
Subjt:  TKGQRVLFGEADKTVVDFLFHLLALPLGTGVELLKASL

TrEMBL top hitse value%identityAlignment
A0A0A0KLL7 Uncharacterized protein3.0e-0463.16Show/hide
Query:  TKGQRVLFGEADKTVVDFLFHLLALPLGTGVELLKASL
        +K +RVLFGEADK ++DFLF+LL+LPLGT + LLK  +
Subjt:  TKGQRVLFGEADKTVVDFLFHLLALPLGTGVELLKASL

A0A1E5UIM8 Uncharacterized protein (Fragment)3.0e-0476.47Show/hide
Query:  TKGQRVLFGEADKTVVDFLFHLLALPLGTGVELL
        TKG RVL+ EA K VVDFLF LLALP+GT VELL
Subjt:  TKGQRVLFGEADKTVVDFLFHLLALPLGTGVELL

A0A392Q251 DUF674 family protein (Fragment)2.3e-0473.53Show/hide
Query:  TKGQRVLFGEADKTVVDFLFHLLALPLGTGVELL
        TK ++VLF EA K VVDFLFH+LALPLGT V+LL
Subjt:  TKGQRVLFGEADKTVVDFLFHLLALPLGTGVELL

A0A6J1CBJ8 uncharacterized protein LOC1110100136.1e-0574.29Show/hide
Query:  TKGQRVLFGEADKTVVDFLFHLLALPLGTGVELLK
        +K QRVLFGEADK V+DFLF+LL+LPLGT + LLK
Subjt:  TKGQRVLFGEADKTVVDFLFHLLALPLGTGVELLK

A0A6J1H015 uncharacterized protein LOC1114586951.6e-0565.79Show/hide
Query:  TKGQRVLFGEADKTVVDFLFHLLALPLGTGVELLKASL
        +KG+RV+FGEADK V+DFLFHLL+LPLGT  +LL+  +
Subjt:  TKGQRVLFGEADKTVVDFLFHLLALPLGTGVELLKASL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACGAAAGGGCAAAGAGTTCTATTTGGTGAAGCAGACAAAACTGTGGTGGATTTCCTTTTCCATCTACTTGCTCTCCCACTTGGAACTGGTGTGGAACTGCTAAAAGCCTC
TCTGCGATCCAAGACTGTTCTTACAGATGTATTCCTTTCAGATTATTAG
mRNA sequenceShow/hide mRNA sequence
ACGAAAGGGCAAAGAGTTCTATTTGGTGAAGCAGACAAAACTGTGGTGGATTTCCTTTTCCATCTACTTGCTCTCCCACTTGGAACTGGTGTGGAACTGCTAAAAGCCTC
TCTGCGATCCAAGACTGTTCTTACAGATGTATTCCTTTCAGATTATTAG
Protein sequenceShow/hide protein sequence
TKGQRVLFGEADKTVVDFLFHLLALPLGTGVELLKASLRSKTVLTDVFLSDY