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Lsi04G009290 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G009290
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionThioredoxin
Genome locationchr04:9608199..9609758
RNA-Seq ExpressionLsi04G009290
SyntenyLsi04G009290
Gene Ontology termsGO:0006662 - glycerol ether metabolic process (biological process)
GO:0015035 - protein disulfide oxidoreductase activity (molecular function)
InterPro domainsIPR005746 - Thioredoxin
IPR013766 - Thioredoxin domain
IPR017937 - Thioredoxin, conserved site
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648009.1 hypothetical protein Csa_021401 [Cucumis sativus]1.5e-3184.71Show/hide
Query:  VVVNFTAAWCGPCRAMAPILQELSKKMS-NVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKHVA
        VVVNFTA+WCGPCR MAPIL+EL+KKMS NVIFLKVDIDELMSIA E+GVSS+PSFQF+KNGKLVDKFVGA K LLQNT+SKH A
Subjt:  VVVNFTAAWCGPCRAMAPILQELSKKMS-NVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKHVA

XP_004149944.1 thioredoxin H-type [Cucumis sativus]1.5e-3184.71Show/hide
Query:  VVVNFTAAWCGPCRAMAPILQELSKKMS-NVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKHVA
        VVVNFTA+WCGPCR MAPIL+EL+KKMS NVIFLKVDIDELMSIA E+GVSS+PSFQF+KNGKLVDKFVGA K LLQNT+SKH A
Subjt:  VVVNFTAAWCGPCRAMAPILQELSKKMS-NVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKHVA

XP_022139186.1 thioredoxin H1-like [Momordica charantia]3.1e-3282.14Show/hide
Query:  VVVNFTAAWCGPCRAMAPILQELSKKMSNVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKHVA
        VVV FTA WCGPCRAMAP+L++L+KK SNVIFLKVD+DELMS+ANE GV +IPSFQF KNGKLVDKFVGANKDLL+NTLSKH A
Subjt:  VVVNFTAAWCGPCRAMAPILQELSKKMSNVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKHVA

XP_022139257.1 thioredoxin H1-like [Momordica charantia]2.0e-3180.95Show/hide
Query:  VVVNFTAAWCGPCRAMAPILQELSKKMSNVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKHVA
        VVV FTA WCGPCRAMAP+L++L+KK SNVIFLKVD+DELM +ANE GV +IPSFQF KNGKLVDKFVGANKDLL NTLSKH A
Subjt:  VVVNFTAAWCGPCRAMAPILQELSKKMSNVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKHVA

XP_038893093.1 thioredoxin H1-like [Benincasa hispida]3.1e-3284.52Show/hide
Query:  VVVNFTAAWCGPCRAMAPILQELSKKMSNVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKHVA
        VVVNFTA WCGPCRAMAPI++ELSKKMSNVIFLKVDIDELMSIA E GVSSIPSFQF+KNGK+VDKFVGA KDLL++T++KH A
Subjt:  VVVNFTAAWCGPCRAMAPILQELSKKMSNVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKHVA

TrEMBL top hitse value%identityAlignment
A0A0A0KLS7 Thioredoxin domain-containing protein7.5e-3284.71Show/hide
Query:  VVVNFTAAWCGPCRAMAPILQELSKKMS-NVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKHVA
        VVVNFTA+WCGPCR MAPIL+EL+KKMS NVIFLKVDIDELMSIA E+GVSS+PSFQF+KNGKLVDKFVGA K LLQNT+SKH A
Subjt:  VVVNFTAAWCGPCRAMAPILQELSKKMS-NVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKHVA

A0A1S3CMJ1 thioredoxin H-type-like1.7e-3183.53Show/hide
Query:  VVVNFTAAWCGPCRAMAPILQELSKKMS-NVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKHVA
        VVVNFTA+WCGPCR MAPIL+EL+KKMS NVIFLKVDIDELMSIA E+GVSS+PSFQF+KNGKLVDKFVGA K+LLQ+T+SKH A
Subjt:  VVVNFTAAWCGPCRAMAPILQELSKKMS-NVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKHVA

A0A5A7U8S0 Thioredoxin H1-like1.7e-3183.53Show/hide
Query:  VVVNFTAAWCGPCRAMAPILQELSKKMS-NVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKHVA
        VVVNFTA+WCGPCR MAPIL+EL+KKMS NVIFLKVDIDELMSIA E+GVSS+PSFQF+KNGKLVDKFVGA K+LLQ+T+SKH A
Subjt:  VVVNFTAAWCGPCRAMAPILQELSKKMS-NVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKHVA

A0A6J1CBX5 thioredoxin H1-like1.5e-3282.14Show/hide
Query:  VVVNFTAAWCGPCRAMAPILQELSKKMSNVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKHVA
        VVV FTA WCGPCRAMAP+L++L+KK SNVIFLKVD+DELMS+ANE GV +IPSFQF KNGKLVDKFVGANKDLL+NTLSKH A
Subjt:  VVVNFTAAWCGPCRAMAPILQELSKKMSNVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKHVA

A0A6J1CDG5 thioredoxin H1-like9.7e-3280.95Show/hide
Query:  VVVNFTAAWCGPCRAMAPILQELSKKMSNVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKHVA
        VVV FTA WCGPCRAMAP+L++L+KK SNVIFLKVD+DELM +ANE GV +IPSFQF KNGKLVDKFVGANKDLL NTLSKH A
Subjt:  VVVNFTAAWCGPCRAMAPILQELSKKMSNVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKHVA

SwissProt top hitse value%identityAlignment
P29448 Thioredoxin H18.5e-2557.14Show/hide
Query:  VVVNFTAAWCGPCRAMAPILQELSKKMSNVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKHVA
        VVV+FTA+WCGPCR +AP   +L+KK+ NV+FLKVD DEL S+A+++ + ++P+F F+K GK++DK VGA KD LQ+T++KH+A
Subjt:  VVVNFTAAWCGPCRAMAPILQELSKKMSNVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKHVA

P29449 Thioredoxin H-type 11.6e-2358.33Show/hide
Query:  VVVNFTAAWCGPCRAMAPILQELSKKMSNVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKHVA
        VVV+FTA+WCGPCR +APIL +++KKM +VIFLKVD+DEL +++ E+ V ++P+F F+K+GK VD+ VGA K+ LQ T+ KH A
Subjt:  VVVNFTAAWCGPCRAMAPILQELSKKMSNVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKHVA

Q07090 Thioredoxin H-type 21.6e-2355.95Show/hide
Query:  VVVNFTAAWCGPCRAMAPILQELSKKMSNVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKHVA
        +VV+FTA+WCGPC+ +A    EL+KKM  V FLKVD+DEL S+A ++ V ++P+F F+K GK+VDK VGA KD LQ T++KH++
Subjt:  VVVNFTAAWCGPCRAMAPILQELSKKMSNVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKHVA

Q0D840 Thioredoxin H13.0e-2254.22Show/hide
Query:  VVVNFTAAWCGPCRAMAPILQELSKKMSNVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKHV
        V+++FTA+WCGPCR +AP+  E +KK    +FLKVD+DEL  +A +Y V ++P+F F+K+G   DK VGA KD LQNT+ KHV
Subjt:  VVVNFTAAWCGPCRAMAPILQELSKKMSNVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKHV

Q43636 Thioredoxin H-type1.6e-2660.47Show/hide
Query:  GKVVVNFTAAWCGPCRAMAPILQELSKKMSNVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKHVA
        G +VV+FTA+WCGPCR +AP L EL+KK+ NV FLKVD+DEL ++A+E+ V S+P+F F+K GK++DK VGA KD LQ T++KH+A
Subjt:  GKVVVNFTAAWCGPCRAMAPILQELSKKMSNVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKHVA

Arabidopsis top hitse value%identityAlignment
AT1G19730.1 Thioredoxin superfamily protein6.3e-2356.63Show/hide
Query:  VVVNFTAAWCGPCRAMAPILQELSKK-MSNVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKH
        +V++FTA+WC PCR +API  +L+KK MS+ IF KVD+DEL S+A E+GV ++P+F F+K G++VDK VGANK+ LQ  + KH
Subjt:  VVVNFTAAWCGPCRAMAPILQELSKK-MSNVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKH

AT1G45145.1 thioredoxin H-type 53.1e-2248.78Show/hide
Query:  VVVNFTAAWCGPCRAMAPILQELSKKMSNVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKH
        +V++FTA+WC PCR +AP+  E++KK +NV+F K+D+DEL ++A E+ V ++P+F FMK G ++D+ VGA KD +   L KH
Subjt:  VVVNFTAAWCGPCRAMAPILQELSKKMSNVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKH

AT3G17880.1 tetraticopeptide domain-containing thioredoxin7.2e-1946.34Show/hide
Query:  VVVNFTAAWCGPCRAMAPILQELSKKMSNVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKH
        +++ FTA WCGPCR M+P+   L+ + S V+FLKVDID+   +A  + +SS+P+F F+++GK VDK VGA+K  L+  +++H
Subjt:  VVVNFTAAWCGPCRAMAPILQELSKKMSNVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKH

AT3G17880.2 tetraticopeptide domain-containing thioredoxin7.2e-1946.34Show/hide
Query:  VVVNFTAAWCGPCRAMAPILQELSKKMSNVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKH
        +++ FTA WCGPCR M+P+   L+ + S V+FLKVDID+   +A  + +SS+P+F F+++GK VDK VGA+K  L+  +++H
Subjt:  VVVNFTAAWCGPCRAMAPILQELSKKMSNVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKH

AT3G51030.1 thioredoxin H-type 16.0e-2657.14Show/hide
Query:  VVVNFTAAWCGPCRAMAPILQELSKKMSNVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKHVA
        VVV+FTA+WCGPCR +AP   +L+KK+ NV+FLKVD DEL S+A+++ + ++P+F F+K GK++DK VGA KD LQ+T++KH+A
Subjt:  VVVNFTAAWCGPCRAMAPILQELSKKMSNVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKHVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAAAGTGGTTGTGAACTTTACAGCAGCATGGTGTGGCCCATGTCGTGCCATGGCTCCAATTCTTCAAGAGCTGTCGAAGAAAATGAGTAATGTTATATTCTTGAA
AGTGGATATTGATGAACTCATGAGTATTGCAAATGAGTATGGAGTAAGTTCCATTCCTTCATTTCAATTCATGAAGAATGGGAAGTTGGTGGACAAGTTCGTAGGTGCAA
ACAAAGATTTACTCCAAAACACTCTTTCCAAACATGTAGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCAAAGTGGTTGTGAACTTTACAGCAGCATGGTGTGGCCCATGTCGTGCCATGGCTCCAATTCTTCAAGAGCTGTCGAAGAAAATGAGTAATGTTATATTCTTGAA
AGTGGATATTGATGAACTCATGAGTATTGCAAATGAGTATGGAGTAAGTTCCATTCCTTCATTTCAATTCATGAAGAATGGGAAGTTGGTGGACAAGTTCGTAGGTGCAA
ACAAAGATTTACTCCAAAACACTCTTTCCAAACATGTAGCCTAA
Protein sequenceShow/hide protein sequence
MGKVVVNFTAAWCGPCRAMAPILQELSKKMSNVIFLKVDIDELMSIANEYGVSSIPSFQFMKNGKLVDKFVGANKDLLQNTLSKHVA