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Lsi04G009300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G009300
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionthioredoxin H1-like
Genome locationchr04:9612602..9613442
RNA-Seq ExpressionLsi04G009300
SyntenyLsi04G009300
Gene Ontology termsNA
InterPro domainsIPR013766 - Thioredoxin domain
IPR017937 - Thioredoxin, conserved site
IPR036249 - Thioredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051550.1 thioredoxin H1-like [Cucumis melo var. makuwa]1.3e-4986.84Show/hide
Query:  MGDMGKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVG
        M DMGKVVSCH+V SWKQQLLKAKQYNKLVVVNFTATWC PCR MAP+L+D+A+KMS NNVI LKVDVDELM VANE GVGALPSFQFFKNGKLVDKFVG
Subjt:  MGDMGKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVG

Query:  ARKDILHNTVSKHV
        ARKD+LH TVSKHV
Subjt:  ARKDILHNTVSKHV

XP_004149943.1 thioredoxin H1 [Cucumis sativus]4.8e-4986.09Show/hide
Query:  MGDMGKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVG
        M DMGKVVSCH+V SWKQQLLKAKQ NKLVVVNFTATWC PCR MAP+LED+A+KMS NNV FLKVDVDELM VA+E GVGALPSFQFFKNGKLVDKFVG
Subjt:  MGDMGKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVG

Query:  ARKDILHNTVSKHVA
        ARKD+LH TVSKHVA
Subjt:  ARKDILHNTVSKHVA

XP_008464900.1 PREDICTED: thioredoxin H1-like [Cucumis melo]4.4e-5086.96Show/hide
Query:  MGDMGKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVG
        M DMGKVVSCH+V SWKQQLLKAKQYNKLVVVNFTATWC PCR MAP+L+D+A+KMS NNVI LKVDVDELM VANE GVGALPSFQFFKNGKLVDKFVG
Subjt:  MGDMGKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVG

Query:  ARKDILHNTVSKHVA
        ARKD+LH TVSKHVA
Subjt:  ARKDILHNTVSKHVA

XP_022139257.1 thioredoxin H1-like [Momordica charantia]7.7e-4783.48Show/hide
Query:  MGDMGKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVG
        M +MGKVVSC SV SWKQQLLKAK+YNKLVVV FTATWCGPCRAMAP+LED+A K S  NVIFLKVDVDELM VANELGVGA+PSFQFFKNGKLVDKFVG
Subjt:  MGDMGKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVG

Query:  ARKDILHNTVSKHVA
        A KD+L NT+SKH A
Subjt:  ARKDILHNTVSKHVA

XP_038893273.1 thioredoxin H1-like [Benincasa hispida]2.5e-5389.47Show/hide
Query:  MGDMGKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVG
        M DMGKVVSCH+V SWKQQLLKAKQYNKLVVVNFTATWCGPCR MAP+LED+ASKM NN+V+FLKVDVDELM VANELGVGALPSFQFFKNGKLVDKFVG
Subjt:  MGDMGKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVG

Query:  ARKDILHNTVSKHV
        ARKD+LH+TVSKHV
Subjt:  ARKDILHNTVSKHV

TrEMBL top hitse value%identityAlignment
A0A0A0KSB1 Thioredoxin domain-containing protein2.3e-4986.09Show/hide
Query:  MGDMGKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVG
        M DMGKVVSCH+V SWKQQLLKAKQ NKLVVVNFTATWC PCR MAP+LED+A+KMS NNV FLKVDVDELM VA+E GVGALPSFQFFKNGKLVDKFVG
Subjt:  MGDMGKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVG

Query:  ARKDILHNTVSKHVA
        ARKD+LH TVSKHVA
Subjt:  ARKDILHNTVSKHVA

A0A1S3CMM6 thioredoxin H1-like2.1e-5086.96Show/hide
Query:  MGDMGKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVG
        M DMGKVVSCH+V SWKQQLLKAKQYNKLVVVNFTATWC PCR MAP+L+D+A+KMS NNVI LKVDVDELM VANE GVGALPSFQFFKNGKLVDKFVG
Subjt:  MGDMGKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVG

Query:  ARKDILHNTVSKHVA
        ARKD+LH TVSKHVA
Subjt:  ARKDILHNTVSKHVA

A0A5A7U8S0 Thioredoxin H1-like6.1e-5086.84Show/hide
Query:  MGDMGKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVG
        M DMGKVVSCH+V SWKQQLLKAKQYNKLVVVNFTATWC PCR MAP+L+D+A+KMS NNVI LKVDVDELM VANE GVGALPSFQFFKNGKLVDKFVG
Subjt:  MGDMGKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVG

Query:  ARKDILHNTVSKHV
        ARKD+LH TVSKHV
Subjt:  ARKDILHNTVSKHV

A0A5D3DCH1 Thioredoxin H1-like2.1e-5086.96Show/hide
Query:  MGDMGKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVG
        M DMGKVVSCH+V SWKQQLLKAKQYNKLVVVNFTATWC PCR MAP+L+D+A+KMS NNVI LKVDVDELM VANE GVGALPSFQFFKNGKLVDKFVG
Subjt:  MGDMGKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVG

Query:  ARKDILHNTVSKHVA
        ARKD+LH TVSKHVA
Subjt:  ARKDILHNTVSKHVA

A0A6J1CDG5 thioredoxin H1-like3.7e-4783.48Show/hide
Query:  MGDMGKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVG
        M +MGKVVSC SV SWKQQLLKAK+YNKLVVV FTATWCGPCRAMAP+LED+A K S  NVIFLKVDVDELM VANELGVGA+PSFQFFKNGKLVDKFVG
Subjt:  MGDMGKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVG

Query:  ARKDILHNTVSKHVA
        A KD+L NT+SKH A
Subjt:  ARKDILHNTVSKHVA

SwissProt top hitse value%identityAlignment
P29448 Thioredoxin H16.2e-3153.15Show/hide
Query:  GKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVGARKD
        G+V++CH+V +W +QL KA +   LVVV+FTA+WCGPCR +AP   D+A K+   NV+FLKVD DEL  VA++  + A+P+F F K GK++DK VGA+KD
Subjt:  GKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVGARKD

Query:  ILHNTVSKHVA
         L +T++KH+A
Subjt:  ILHNTVSKHVA

P29449 Thioredoxin H-type 12.2e-2855.86Show/hide
Query:  GKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVGARKD
        G+V  CH V  W +   K  +  KLVVV+FTA+WCGPCR +APIL DIA KM   +VIFLKVDVDEL  V+ E  V A+P+F F K+GK VD+ VGA+K+
Subjt:  GKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVGARKD

Query:  ILHNTVSKHVA
         L  T+ KH A
Subjt:  ILHNTVSKHVA

Q39239 Thioredoxin H41.1e-2753.21Show/hide
Query:  GKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVGARKD
        G+V+ CH+   W  QL KAK+ NKL+V++FTA+WC PCR +API  D+A K   ++ IF KVDVDEL  VA E GV A+P+F F K G++VDK VGA K+
Subjt:  GKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVGARKD

Query:  ILHNTVSKH
         L   + KH
Subjt:  ILHNTVSKH

Q39362 Thioredoxin H-type 21.2e-2954.13Show/hide
Query:  GKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVGARKD
        G+V+ CH +  W  QL  AKQ NKL+V++FTA+WC PCR +AP+  D+A K   ++ IF KVDVDEL  VA E GV A+P+F   K+G +VDK VGARK+
Subjt:  GKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVGARKD

Query:  ILHNTVSKH
         LH T++KH
Subjt:  ILHNTVSKH

Q43636 Thioredoxin H-type8.9e-3053.15Show/hide
Query:  GKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVGARKD
        G+V+ CH+V +W +QL K      L+VV+FTA+WCGPCR +AP L ++A K+   NV FLKVDVDEL  VA+E  V ++P+F F K GK++DK VGA+KD
Subjt:  GKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVGARKD

Query:  ILHNTVSKHVA
         L  T++KH+A
Subjt:  ILHNTVSKHVA

Arabidopsis top hitse value%identityAlignment
AT1G19730.1 Thioredoxin superfamily protein7.7e-2953.21Show/hide
Query:  GKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVGARKD
        G+V+ CH+   W  QL KAK+ NKL+V++FTA+WC PCR +API  D+A K   ++ IF KVDVDEL  VA E GV A+P+F F K G++VDK VGA K+
Subjt:  GKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVGARKD

Query:  ILHNTVSKH
         L   + KH
Subjt:  ILHNTVSKH

AT1G45145.1 thioredoxin H-type 51.2e-2643.36Show/hide
Query:  MGDMGKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVG
        M   G+V++CH++  W +++  A +  KL+V++FTA+WC PCR +AP+  ++A K +  NV+F K+DVDEL  VA E  V A+P+F F K G ++D+ VG
Subjt:  MGDMGKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVG

Query:  ARKDILHNTVSKH
        A KD ++  + KH
Subjt:  ARKDILHNTVSKH

AT3G17880.1 tetraticopeptide domain-containing thioredoxin1.2e-2141.28Show/hide
Query:  GKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVGARKD
        G+V+S HS S  + +   AK+ ++L+++ FTATWCGPCR M+P+  ++A++  ++ V+FLKVD+D+   VA    + ++P+F F ++GK VDK VGA K 
Subjt:  GKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVGARKD

Query:  ILHNTVSKH
         L   +++H
Subjt:  ILHNTVSKH

AT3G51030.1 thioredoxin H-type 14.4e-3253.15Show/hide
Query:  GKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVGARKD
        G+V++CH+V +W +QL KA +   LVVV+FTA+WCGPCR +AP   D+A K+   NV+FLKVD DEL  VA++  + A+P+F F K GK++DK VGA+KD
Subjt:  GKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVGARKD

Query:  ILHNTVSKHVA
         L +T++KH+A
Subjt:  ILHNTVSKHVA

AT5G42980.1 thioredoxin 38.8e-2545.13Show/hide
Query:  MGDMGKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVG
        M   G+V++CH+V  W ++L  A +  KL+V++FTATWC PCR +AP+  D+A K  + +V+F KVDVDEL  VA E  V A+P+F F K G++ +  VG
Subjt:  MGDMGKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVG

Query:  ARKDILHNTVSKH
        A K+ +   + KH
Subjt:  ARKDILHNTVSKH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGATATGGGGAAAGTAGTTTCATGCCACAGTGTTAGTTCATGGAAGCAACAGCTCCTCAAAGCCAAACAATACAATAAATTGGTCGTCGTGAATTTTACCGCAAC
ATGGTGCGGCCCGTGTCGTGCCATGGCTCCAATTCTTGAAGACATAGCAAGTAAAATGAGTAATAACAATGTTATATTTTTAAAAGTGGACGTTGATGAACTCATGGGTG
TTGCCAATGAGTTGGGAGTGGGAGCTCTGCCCTCGTTTCAATTCTTCAAGAATGGAAAGTTAGTGGACAAGTTCGTGGGGGCAAGAAAAGATATATTACACAACACTGTA
TCCAAACATGTTGCATGA
mRNA sequenceShow/hide mRNA sequence
CGTATATTTTATTTCCTTCTAAAATAAACAAAACCCTTTAGCTCATTTTTCCCTTTGCCTTTTCTTCTAATAAGGTATTGGAAAAATGGGTGATATGGGGAAAGTAGTTT
CATGCCACAGTGTTAGTTCATGGAAGCAACAGCTCCTCAAAGCCAAACAATACAATAAATTGGTCGTCGTGAATTTTACCGCAACATGGTGCGGCCCGTGTCGTGCCATG
GCTCCAATTCTTGAAGACATAGCAAGTAAAATGAGTAATAACAATGTTATATTTTTAAAAGTGGACGTTGATGAACTCATGGGTGTTGCCAATGAGTTGGGAGTGGGAGC
TCTGCCCTCGTTTCAATTCTTCAAGAATGGAAAGTTAGTGGACAAGTTCGTGGGGGCAAGAAAAGATATATTACACAACACTGTATCCAAACATGTTGCATGAAGCTGCT
TTTTGGATCCAAAGTAATATTTGGATGCAGTTTACATTGCGTCAATTTTCATGCTTTCTTTTTAATCATAAAGGAAAATATATTTTTTTCAAAAAAAAAATTGTCATGTT
GTAACCTGTGATTATGCACTTGGATGGTCTTAAAGATGCACCCAAGTATTTTTCAATTAAGCAAAATCAAATGTTGAGT
Protein sequenceShow/hide protein sequence
MGDMGKVVSCHSVSSWKQQLLKAKQYNKLVVVNFTATWCGPCRAMAPILEDIASKMSNNNVIFLKVDVDELMGVANELGVGALPSFQFFKNGKLVDKFVGARKDILHNTV
SKHVA