CuGenDBv2

Gene ID	Lsi04G009360
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	17.8 kDa class I heat shock protein-like
Genome location	chr04:9647758..9648703
RNA-Seq Expression	Lsi04G009360
Synteny	Lsi04G009360
Gene Ontology terms	GO:0006457 - protein folding (biological process) GO:0009408 - response to heat (biological process) GO:0009651 - response to salt stress (biological process) GO:0042542 - response to hydrogen peroxide (biological process) GO:0051259 - protein complex oligomerization (biological process) GO:0043621 - protein self-association (molecular function) GO:0051082 - unfolded protein binding (molecular function)
InterPro domains	IPR002068 - Alpha crystallin/Hsp20 domain IPR008978 - HSP20-like chaperone IPR031107 - Small heat shock protein HSP20

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0051547.1 17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa]

3.7e-30

55.1

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Query:  MSLIRRMTGGRRRSNVYYDPFSLE---------------------ETGSAFMDIRIDWKETPNAHIFKADLPGINK-DVKMEVQESKILEFSGERRKEEE
        M+LI  + GG RRSNV +DPFSL+                        SAF + RIDWKETP AHIFKADLPGINK +VK+EV+E ++L+ SGER KE+E
Subjt:  MSLIRRMTGGRRRSNVYYDPFSLE---------------------ETGSAFMDIRIDWKETPNAHIFKADLPGINK-DVKMEVQESKILEFSGERRKEEE

Query:  EKTEKWYKVERRSGKFLRRFKLPENANVADMNTSMEDGVLTNTPTKL
        EK +KW++VER SGKF+RRF+LPENA V ++  SME+GVLT T  K+
Subjt:  EKTEKWYKVERRSGKFLRRFKLPENANVADMNTSMEDGVLTNTPTKL

XP_004150237.2 18.1 kDa class I heat shock protein [Cucumis sativus]

1.7e-38

68.25

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Query:  MSLIRRMTGGRRRSNVYYDPF------SLEETGSAFMDIRIDWKETPNAHIFKADLPGIN-KDVKMEVQESKILEFSGERRKEEEEKTEKWYKVERRSGK
        MSLIRRMTGGRRR N+++DPF      S EET SAFM  +IDWKETPNAHIFKADLPG+  ++V M+V E+KILE SGER KE +E++E+W++VERRSGK
Subjt:  MSLIRRMTGGRRRSNVYYDPF------SLEETGSAFMDIRIDWKETPNAHIFKADLPGIN-KDVKMEVQESKILEFSGERRKEEEEKTEKWYKVERRSGK

Query:  FLRRFKLPENANVADMNTSMEDGVLT
        FLRRF+LPEN  V D+N SMEDG+LT
Subjt:  FLRRFKLPENANVADMNTSMEDGVLT

XP_023880979.1 18.1 kDa class I heat shock protein-like [Quercus suber]

3.7e-30

55.8

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Query:  MSLIRRMTGGRRRSNVYYDPFSLE------------ETGSAFMDIRIDWKETPNAHIFKADLPGINK-DVKMEVQESKILEFSGERRKEEEEKTEKWYKV
        MSLI  + GG RR+NV +DPFSL+               S+F ++RIDWKETP AH+FKADLPG+ K +VK+EV+E ++L+ SGER KE+EEK EKW++V
Subjt:  MSLIRRMTGGRRRSNVYYDPFSLE------------ETGSAFMDIRIDWKETPNAHIFKADLPGINK-DVKMEVQESKILEFSGERRKEEEEKTEKWYKV

Query:  ERRSGKFLRRFKLPENANVADMNTSMEDGVLTNTPTKL
        ER SGKFLRRF+LP+NA + ++  SME+GVLT T  K+
Subjt:  ERRSGKFLRRFKLPENANVADMNTSMEDGVLTNTPTKL

XP_030922868.1 18.1 kDa class I heat shock protein-like [Quercus lobata]

4.9e-30

55.8

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Query:  MSLIRRMTGGRRRSNVYYDPFSLE------------ETGSAFMDIRIDWKETPNAHIFKADLPGINK-DVKMEVQESKILEFSGERRKEEEEKTEKWYKV
        MSLI  + GG RR+NV +DPFSL+               S+F ++RIDWKETP AH+FKADLPG+ K +VK+EV+E ++L+ SGER KE+EEK EKW++V
Subjt:  MSLIRRMTGGRRRSNVYYDPFSLE------------ETGSAFMDIRIDWKETPNAHIFKADLPGINK-DVKMEVQESKILEFSGERRKEEEEKTEKWYKV

Query:  ERRSGKFLRRFKLPENANVADMNTSMEDGVLTNTPTKL
        ER SGKFLRRF+LP+NA + ++  SME+GVLT T  K+
Subjt:  ERRSGKFLRRFKLPENANVADMNTSMEDGVLTNTPTKL

XP_038892902.1 17.8 kDa class I heat shock protein-like [Benincasa hispida]

1.5e-47

78.79

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Query:  MSLIRRMTGGRRRSNVYYDPFSL------EETGSAFMDIRIDWKETPNAHIFKADLPGINK-DVKMEVQESKILEFSGERRKEEEEKTEKWYKVERRSGK
        MSLIRRMTGGRRRSNVYYDPFSL      EETGSAFMD RIDWKETPNAHIFKADLPG+ K +VKMEV+E +ILE SGERRKE EE++EKWY+VERRSGK
Subjt:  MSLIRRMTGGRRRSNVYYDPFSL------EETGSAFMDIRIDWKETPNAHIFKADLPGINK-DVKMEVQESKILEFSGERRKEEEEKTEKWYKVERRSGK

Query:  FLRRFKLPENANVADMNTSMEDGVLTNTPTKL
        FLRRF+LPEN  V D+NTSMEDGVLT T  K+
Subjt:  FLRRFKLPENANVADMNTSMEDGVLTNTPTKL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KP16 SHSP domain-containing protein

8.1e-39

68.25

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Query:  MSLIRRMTGGRRRSNVYYDPF------SLEETGSAFMDIRIDWKETPNAHIFKADLPGIN-KDVKMEVQESKILEFSGERRKEEEEKTEKWYKVERRSGK
        MSLIRRMTGGRRR N+++DPF      S EET SAFM  +IDWKETPNAHIFKADLPG+  ++V M+V E+KILE SGER KE +E++E+W++VERRSGK
Subjt:  MSLIRRMTGGRRRSNVYYDPF------SLEETGSAFMDIRIDWKETPNAHIFKADLPGIN-KDVKMEVQESKILEFSGERRKEEEEKTEKWYKVERRSGK

Query:  FLRRFKLPENANVADMNTSMEDGVLT
        FLRRF+LPEN  V D+N SMEDG+LT
Subjt:  FLRRFKLPENANVADMNTSMEDGVLT

A0A5A7UAZ9 17.8 kDa class I heat shock protein-like

1.8e-30

55.1

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Query:  MSLIRRMTGGRRRSNVYYDPFSLE---------------------ETGSAFMDIRIDWKETPNAHIFKADLPGINK-DVKMEVQESKILEFSGERRKEEE
        M+LI  + GG RRSNV +DPFSL+                        SAF + RIDWKETP AHIFKADLPGINK +VK+EV+E ++L+ SGER KE+E
Subjt:  MSLIRRMTGGRRRSNVYYDPFSLE---------------------ETGSAFMDIRIDWKETPNAHIFKADLPGINK-DVKMEVQESKILEFSGERRKEEE

Query:  EKTEKWYKVERRSGKFLRRFKLPENANVADMNTSMEDGVLTNTPTKL
        EK +KW++VER SGKF+RRF+LPENA V ++  SME+GVLT T  K+
Subjt:  EKTEKWYKVERRSGKFLRRFKLPENANVADMNTSMEDGVLTNTPTKL

A0A7N2KPJ1 SHSP domain-containing protein

2.4e-30

55.8

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Query:  MSLIRRMTGGRRRSNVYYDPFSLE------------ETGSAFMDIRIDWKETPNAHIFKADLPGINK-DVKMEVQESKILEFSGERRKEEEEKTEKWYKV
        MSLI  + GG RR+NV +DPFSL+               S+F ++RIDWKETP AH+FKADLPG+ K +VK+EV+E ++L+ SGER KE+EEK EKW++V
Subjt:  MSLIRRMTGGRRRSNVYYDPFSLE------------ETGSAFMDIRIDWKETPNAHIFKADLPGINK-DVKMEVQESKILEFSGERRKEEEEKTEKWYKV

Query:  ERRSGKFLRRFKLPENANVADMNTSMEDGVLTNTPTKL
        ER SGKFLRRF+LP+NA + ++  SME+GVLT T  K+
Subjt:  ERRSGKFLRRFKLPENANVADMNTSMEDGVLTNTPTKL

A5B3G4 SHSP domain-containing protein

9.0e-30

52.74

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Query:  MSLIRRMTGGRRRSNVYYDPFSLE---------------------ETGSAFMDIRIDWKETPNAHIFKADLPGINK-DVKMEVQESKILEFSGERRKEEE
        MSLI  + G  RRSN+ +DPFSLE                        SAF + RIDWKETP AH+FKADLPG+ K +VK+EV+E ++L+ SGER KE+E
Subjt:  MSLIRRMTGGRRRSNVYYDPFSLE---------------------ETGSAFMDIRIDWKETPNAHIFKADLPGINK-DVKMEVQESKILEFSGERRKEEE

Query:  EKTEKWYKVERRSGKFLRRFKLPENANVADMNTSMEDGVLTNTPTK
        EK +KW++VER SGKFLRRF+LPENA + ++  S+E+GVLT T  K
Subjt:  EKTEKWYKVERRSGKFLRRFKLPENANVADMNTSMEDGVLTNTPTK

H6TB47 HSP18.1B

5.3e-30

56.08

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Query:  MSLIRRMTGGRRRSNVYYDPFSLE----------------------ETGSAFMDIRIDWKETPNAHIFKADLPGINKD-VKMEVQESKILEFSGERRKEE
        MSLI    GG RRSNV +DPFSL+                      ET SAF + RIDWKETP AHIFKADLPGI KD VK+EV+E ++L+ SGER KE+
Subjt:  MSLIRRMTGGRRRSNVYYDPFSLE----------------------ETGSAFMDIRIDWKETPNAHIFKADLPGINKD-VKMEVQESKILEFSGERRKEE

Query:  EEKTEKWYKVERRSGKFLRRFKLPENANVADMNTSMEDGVLTNTPTKL
        EEK EKW+++ER SGKF+RRF+LPE+A V ++  SME+GVLT T  K+
Subjt:  EEKTEKWYKVERRSGKFLRRFKLPENANVADMNTSMEDGVLTNTPTKL

SwissProt top hits

e value

%identity

Alignment

O82011 17.7 kDa class I heat shock protein

1.7e-30

52.86

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Query:  MSLIRRMTGGRRRSNVYYDPFSLE------ETG---------SAFMDIRIDWKETPNAHIFKADLPGIN-KDVKMEVQESKILEFSGERRKEEEEKTEKW
        MSLI R+ G RR S++ +DPFS++      E G         SAF + RIDWKETP AH+FKADLPG+  ++VK+EV+E ++L+ SGER  E+E+K +KW
Subjt:  MSLIRRMTGGRRRSNVYYDPFSLE------ETG---------SAFMDIRIDWKETPNAHIFKADLPGIN-KDVKMEVQESKILEFSGERRKEEEEKTEKW

Query:  YKVERRSGKFLRRFKLPENANVADMNTSMEDGVLTNTPTK
         +VER SGKF+RRF+LPENA +  +  SME+GVLT T  K
Subjt:  YKVERRSGKFLRRFKLPENANVADMNTSMEDGVLTNTPTK

O82012 17.6 kDa class I heat shock protein

1.7e-30

52.86

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Query:  MSLIRRMTGGRRRSNVYYDPFSLE------ETG---------SAFMDIRIDWKETPNAHIFKADLPGINK-DVKMEVQESKILEFSGERRKEEEEKTEKW
        MSLI R+ G RR ++V +DPFS++      E G         SAF + RIDWKETP AH+FKADLPG+ K +VK+EV+E ++L+ SGER  E+E+K + W
Subjt:  MSLIRRMTGGRRRSNVYYDPFSLE------ETG---------SAFMDIRIDWKETPNAHIFKADLPGINK-DVKMEVQESKILEFSGERRKEEEEKTEKW

Query:  YKVERRSGKFLRRFKLPENANVADMNTSMEDGVLTNTPTK
        ++VER SGKF+RRF+LPENA +  +  SME+GVLT T  K
Subjt:  YKVERRSGKFLRRFKLPENANVADMNTSMEDGVLTNTPTK

P02519 17.3 kDa class I heat shock protein

2.5e-29

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Query:  MSLIRRMTGGRRRSNVYYDPFSLE---------------ETGSAFMDIRIDWKETPNAHIFKADLPGINK-DVKMEVQESKILEFSGERRKEEEEKTEKW
        MSLI    GGRR S   +DPFSL+                  SAF+  R+DWKETP AH+FKAD+PG+ K +VK+E+Q+ ++L+ SGER  E+E+K + W
Subjt:  MSLIRRMTGGRRRSNVYYDPFSLE---------------ETGSAFMDIRIDWKETPNAHIFKADLPGINK-DVKMEVQESKILEFSGERRKEEEEKTEKW

Query:  YKVERRSGKFLRRFKLPENANVADMNTSMEDGVLTNTPTK
        ++VER SGK +RRF+LPENA V  +  SME+GVLT T  K
Subjt:  YKVERRSGKFLRRFKLPENANVADMNTSMEDGVLTNTPTK

P27396 17.8 kDa class I heat shock protein

2.3e-30

50.34

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Query:  MSLIRRMTGGRRRSNVYYDPFSLE-------------------ETGSAFMDIRIDWKETPNAHIFKADLPGINK-DVKMEVQESKILEFSGERRKEEEEK
        MS+I    GG RRSNV +DPFSL+                   +  +AF++  IDWKETP AH+FKADLPG+ K +VK+E++E K+L+ SGER KE+EEK
Subjt:  MSLIRRMTGGRRRSNVYYDPFSLE-------------------ETGSAFMDIRIDWKETPNAHIFKADLPGINK-DVKMEVQESKILEFSGERRKEEEEK

Query:  TEKWYKVERRSGKFLRRFKLPENANVADMNTSMEDGVLTNTPTKLTL
         +KW++VER SGKFLRRF+LPENA V ++  +M +GV+T T  K+ +
Subjt:  TEKWYKVERRSGKFLRRFKLPENANVADMNTSMEDGVLTNTPTKLTL

P30221 17.8 kDa class I heat shock protein

8.6e-30

51.43

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Query:  MSLIRRMTGGRRRSNVYYDPFSLE------ETG---------SAFMDIRIDWKETPNAHIFKADLPGINK-DVKMEVQESKILEFSGERRKEEEEKTEKW
        MSLI R+ G RR S++ +DPFS++      E G         SAF + RIDWKETP  H+FK DLPG+ K +VK+EV+E ++L+ SGER  E+E+K +KW
Subjt:  MSLIRRMTGGRRRSNVYYDPFSLE------ETG---------SAFMDIRIDWKETPNAHIFKADLPGINK-DVKMEVQESKILEFSGERRKEEEEKTEKW

Query:  YKVERRSGKFLRRFKLPENANVADMNTSMEDGVLTNTPTK
        +++ER SGKF+RRF+LPENA +  +  SME+GVLT T  K
Subjt:  YKVERRSGKFLRRFKLPENANVADMNTSMEDGVLTNTPTK

Arabidopsis top hits

e value

%identity

Alignment

AT1G07400.1 HSP20-like chaperones superfamily protein

7.5e-29

48.59

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Query:  MSLIRRMTGGRRRSNVYYDPFSLE----------------ETGSAFMDIRIDWKETPNAHIFKADLPGINK-DVKMEVQESKILEFSGERRKEEEEKTEK
        MSLI    G  RRSN  +DPFSL+                ET SA  + R+DWKET  AH+FKADLPG+ K +VK+E+++  +L+ SGER  E+EEK + 
Subjt:  MSLIRRMTGGRRRSNVYYDPFSLE----------------ETGSAFMDIRIDWKETPNAHIFKADLPGINK-DVKMEVQESKILEFSGERRKEEEEKTEK

Query:  WYKVERRSGKFLRRFKLPENANVADMNTSMEDGVLTNTPTKL
        W++VER SG+F R+FKLPEN  +  +  SME+GVLT T  K+
Subjt:  WYKVERRSGKFLRRFKLPENANVADMNTSMEDGVLTNTPTKL

AT1G53540.1 HSP20-like chaperones superfamily protein

2.0e-29

49.66

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Query:  MSLIRRMTGGRRRSNVYYDPFSLE----------ETG---------SAFMDIRIDWKETPNAHIFKADLPGINK-DVKMEVQESKILEFSGERRKEEEEK
        MSLI  + GG RR+NV +DPFSL+           +G         +AF + ++DW+ETP AH+FKADLPG+ K +VK+EV++  IL+ SGER  E EEK
Subjt:  MSLIRRMTGGRRRSNVYYDPFSLE----------ETG---------SAFMDIRIDWKETPNAHIFKADLPGINK-DVKMEVQESKILEFSGERRKEEEEK

Query:  TEKWYKVERRSGKFLRRFKLPENANVADMNTSMEDGVLTNTPTKL
         +KW++VER SGKF RRF+LPENA + ++  SME+GVL+ T  K+
Subjt:  TEKWYKVERRSGKFLRRFKLPENANVADMNTSMEDGVLTNTPTKL

AT2G29500.1 HSP20-like chaperones superfamily protein

1.7e-28

46.38

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Query:  MSLIRRMTGGRRRSNVY-------YDPF------SLEETGSAFMDIRIDWKETPNAHIFKADLPGINK-DVKMEVQESKILEFSGERRKEEEEKTEKWYK
        MS+I       RRSN++       +DPF      SL    SA ++ R+DW+ETP AH+FKADLPG+ K +VK+E++E  +L+ SGER  E+E+K + W++
Subjt:  MSLIRRMTGGRRRSNVY-------YDPF------SLEETGSAFMDIRIDWKETPNAHIFKADLPGINK-DVKMEVQESKILEFSGERRKEEEEKTEKWYK

Query:  VERRSGKFLRRFKLPENANVADMNTSMEDGVLTNTPTK
        VER SG+F RRF+LPEN  +  +  +ME+GVLT T  K
Subjt:  VERRSGKFLRRFKLPENANVADMNTSMEDGVLTNTPTK

AT3G46230.1 heat shock protein 17.4

2.6e-29

47.92

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Query:  MSLIRRMTGGRRRSNVYYDPFSLE------------------ETGSAFMDIRIDWKETPNAHIFKADLPGINK-DVKMEVQESKILEFSGERRKEEEEKT
        MSL+    GG RR+NV +DPFSL+                  +  +AF + ++DW+ETP AH+FKAD+PG+ K +VK+EV++  IL+ SGER  E EEK+
Subjt:  MSLIRRMTGGRRRSNVYYDPFSLE------------------ETGSAFMDIRIDWKETPNAHIFKADLPGINK-DVKMEVQESKILEFSGERRKEEEEKT

Query:  EKWYKVERRSGKFLRRFKLPENANVADMNTSMEDGVLTNTPTKL
        + W++VER SGKF+RRF+LPENA V ++  SME+GVL+ T  K+
Subjt:  EKWYKVERRSGKFLRRFKLPENANVADMNTSMEDGVLTNTPTKL

AT5G59720.1 heat shock protein 18.2

2.3e-30

50.71

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Query:  MSLIRRMTGGRRRSNVY-------YDPF-------------SLEETGSAFMDIRIDWKETPNAHIFKADLPGINK-DVKMEVQESKILEFSGERRKEEEE
        MSLI  + GG RRSNV+       +DPF             S     +AF + R+DWKETP AH+FKADLPG+ K +VK+EV++  +L+ SGER KE EE
Subjt:  MSLIRRMTGGRRRSNVY-------YDPF-------------SLEETGSAFMDIRIDWKETPNAHIFKADLPGINK-DVKMEVQESKILEFSGERRKEEEE

Query:  KTEKWYKVERRSGKFLRRFKLPENANVADMNTSMEDGVLT
        K +KW++VER SGKF+RRF+LPENA + ++  +ME+GVLT
Subjt:  KTEKWYKVERRSGKFLRRFKLPENANVADMNTSMEDGVLT

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTCACTGATTCGGCGAATGACCGGTGGGCGGCGGCGGAGCAACGTGTACTACGATCCCTTCTCATTGGAAGAAACGGGTTCTGCTTTTATGGACATTCGAATAGACTG
GAAAGAGACGCCAAATGCTCACATCTTCAAGGCGGATCTTCCCGGAATAAATAAAGATGTGAAAATGGAAGTTCAAGAGAGCAAAATTCTGGAGTTTAGTGGGGAGAGAA
GAAAGGAGGAAGAGGAGAAGACCGAAAAGTGGTACAAAGTGGAGCGGAGGAGTGGGAAGTTCTTAAGAAGATTCAAGTTGCCGGAGAATGCCAATGTGGCTGACATGAAT
ACGAGCATGGAGGATGGAGTTTTGACGAACACACCAACAAAGCTCACTTTAGACGATTTATTAAACATACATGTGCAGAGGCAGAACTCAGAACTCCAAGGAACAGTGTG
A

mRNA sequence

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Protein sequence

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MSLIRRMTGGRRRSNVYYDPFSLEETGSAFMDIRIDWKETPNAHIFKADLPGINKDVKMEVQESKILEFSGERRKEEEEKTEKWYKVERRSGKFLRRFKLPENANVADMN
TSMEDGVLTNTPTKLTLDDLLNIHVQRQNSELQGTV

Lsi04G009360 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome