; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G009650 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G009650
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationchr04:10141485..10142171
RNA-Seq ExpressionLsi04G009650
SyntenyLsi04G009650
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025321.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]4.5e-3445.05Show/hide
Query:  KQPELERERDSLNIEAIQMKKKNNILLRDIAALHNEAATQNEYIKELKQELERMNKIAANFQNALNEPAASSQKIV------------------------
        K+ ELE+E DSLN EAIQ++KKN  LLR+IA LH E   +   I +LK E+E++N I   FQNAL+E A SSQ+                          
Subjt:  KQPELERERDSLNIEAIQMKKKNNILLRDIAALHNEAATQNEYIKELKQELERMNKIAANFQNALNEPAASSQKIV------------------------

Query:  --AEEAVTSVEHQLSMCCNAREVMTNDYVQLKRKYPKMSTNFVIWRDEYRILRLNYDSVREHVEQEAEKLRQIARMVDRFATHATTLRQGIIPIRPGSNE
           ++AV S E QL +C  AREV+T+DY QL  KY +MS +F++W+DEY  LR  YD     +E+ AEKLRQ+A + D+F+  A TLRQG+IP R    E
Subjt:  --AEEAVTSVEHQLSMCCNAREVMTNDYVQLKRKYPKMSTNFVIWRDEYRILRLNYDSVREHVEQEAEKLRQIARMVDRFATHATTLRQGIIPIRPGSNE

Query:  FS
         S
Subjt:  FS

KAA0034829.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]5.3e-2743.75Show/hide
Query:  KQPELERERDSLNIEAIQMKKKNNILLRDIAALHNEAATQNEYIKELKQELERMNKIAANFQNALNEPAASSQKIVAEEAVTSVEHQLSMCCNAREVMTN
        K+ +LE+E DSLN EAIQ++KKN  LLR+IA LH E        K    E+E +      +++ L +    ++    ++AV S E QL +C  A+EV+T+
Subjt:  KQPELERERDSLNIEAIQMKKKNNILLRDIAALHNEAATQNEYIKELKQELERMNKIAANFQNALNEPAASSQKIVAEEAVTSVEHQLSMCCNAREVMTN

Query:  DYVQLKRKYPKMSTNFVIWRDEYRILRLNYDSVREHVEQEAEKLRQIARMVDRFATHATTLRQGIIPIRPGSNEFS
        DY QL  KY +MS +F++W+DEY  LR  YD     +E+ AEKLRQ+A M D+F+  A TLRQG+IP R  + E S
Subjt:  DYVQLKRKYPKMSTNFVIWRDEYRILRLNYDSVREHVEQEAEKLRQIARMVDRFATHATTLRQGIIPIRPGSNEFS

KAA0046606.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]8.2e-2845.45Show/hide
Query:  KQPELERERDSLNIEAIQMKKKNNILLRDIAALHNEAATQNEYIKELKQELERMNKIAANFQNALNEPAASSQKIVAEEAVTSVEHQLSMCCNAREVMTN
        K+ ELE+E DSLN EAIQ++KKN  LLR+IA LH E        K+    +E +      +++ L E  A S+    ++AV S E QL +C  AR+V+T+
Subjt:  KQPELERERDSLNIEAIQMKKKNNILLRDIAALHNEAATQNEYIKELKQELERMNKIAANFQNALNEPAASSQKIVAEEAVTSVEHQLSMCCNAREVMTN

Query:  DYVQLKRKYPKMSTNFVIWRDEYRILRLNYDSVREHVEQEAEKLRQIARMVDRFATHATTLRQGIIPIRPGSNEFS
        DY QL  KY +MS +F++W+DEY  LR  YD     +E+ AEKLRQ+AR+ D+F+  A TLRQG+IP R    E S
Subjt:  DYVQLKRKYPKMSTNFVIWRDEYRILRLNYDSVREHVEQEAEKLRQIARMVDRFATHATTLRQGIIPIRPGSNEFS

KAA0051514.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]2.4e-2746.24Show/hide
Query:  ELERERDSLNIEAIQMKKKNNILLRDIAALHNEAATQNEYIKELKQELERMNKIAANFQNALNEPAASSQKIVAEEAVTSVEHQLSMCCNAREVMTNDYV
        ELE+  DSLN +AIQM+KKN  LLR+IA LH E   +N  +     E+E + +    +++ + E  A  +    +EAV S E QL +C  AR+V TNDY 
Subjt:  ELERERDSLNIEAIQMKKKNNILLRDIAALHNEAATQNEYIKELKQELERMNKIAANFQNALNEPAASSQKIVAEEAVTSVEHQLSMCCNAREVMTNDYV

Query:  QLKRKYPKMSTNFVIWRDEYRILRLNYDSVREHVEQEAEKLRQIARMVDRFATHATTLRQGIIPIRPGSNEFS
        QL   Y +MS +F+IWR+EY  LR  YD  R  +EQ  EKLRQ+ARM D+F   A TL++G+IPIR  + E S
Subjt:  QLKRKYPKMSTNFVIWRDEYRILRLNYDSVREHVEQEAEKLRQIARMVDRFATHATTLRQGIIPIRPGSNEFS

KAA0065294.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]7.0e-3546.04Show/hide
Query:  KQPELERERDSLNIEAIQMKKKNNILLRDIAALHNEAATQNEYIKELKQELERMNKIAANFQNALNEPAASSQKIV------------------------
        K+ ELE+E DSLN EAIQM+KKN  LLR+IA LH E   +   I +LK E+E++N IA  FQNAL+E A SSQ+                          
Subjt:  KQPELERERDSLNIEAIQMKKKNNILLRDIAALHNEAATQNEYIKELKQELERMNKIAANFQNALNEPAASSQKIV------------------------

Query:  --AEEAVTSVEHQLSMCCNAREVMTNDYVQLKRKYPKMSTNFVIWRDEYRILRLNYDSVREHVEQEAEKLRQIARMVDRFATHATTLRQGIIPIRPGSNE
           ++AV S E QL +C  AREV+ +DY QL  KY +MS +F++W+DEY  LR  YD     +E+ AEKLRQ+AR+ D+F+  A TLRQG+IP R    E
Subjt:  --AEEAVTSVEHQLSMCCNAREVMTNDYVQLKRKYPKMSTNFVIWRDEYRILRLNYDSVREHVEQEAEKLRQIARMVDRFATHATTLRQGIIPIRPGSNE

Query:  FS
         S
Subjt:  FS

TrEMBL top hitse value%identityAlignment
A0A5A7SM49 Glial fibrillary acidic protein-like2.2e-3445.05Show/hide
Query:  KQPELERERDSLNIEAIQMKKKNNILLRDIAALHNEAATQNEYIKELKQELERMNKIAANFQNALNEPAASSQKIV------------------------
        K+ ELE+E DSLN EAIQ++KKN  LLR+IA LH E   +   I +LK E+E++N I   FQNAL+E A SSQ+                          
Subjt:  KQPELERERDSLNIEAIQMKKKNNILLRDIAALHNEAATQNEYIKELKQELERMNKIAANFQNALNEPAASSQKIV------------------------

Query:  --AEEAVTSVEHQLSMCCNAREVMTNDYVQLKRKYPKMSTNFVIWRDEYRILRLNYDSVREHVEQEAEKLRQIARMVDRFATHATTLRQGIIPIRPGSNE
           ++AV S E QL +C  AREV+T+DY QL  KY +MS +F++W+DEY  LR  YD     +E+ AEKLRQ+A + D+F+  A TLRQG+IP R    E
Subjt:  --AEEAVTSVEHQLSMCCNAREVMTNDYVQLKRKYPKMSTNFVIWRDEYRILRLNYDSVREHVEQEAEKLRQIARMVDRFATHATTLRQGIIPIRPGSNE

Query:  FS
         S
Subjt:  FS

A0A5A7T0F3 Glial fibrillary acidic protein-like2.6e-2743.75Show/hide
Query:  KQPELERERDSLNIEAIQMKKKNNILLRDIAALHNEAATQNEYIKELKQELERMNKIAANFQNALNEPAASSQKIVAEEAVTSVEHQLSMCCNAREVMTN
        K+ +LE+E DSLN EAIQ++KKN  LLR+IA LH E        K    E+E +      +++ L +    ++    ++AV S E QL +C  A+EV+T+
Subjt:  KQPELERERDSLNIEAIQMKKKNNILLRDIAALHNEAATQNEYIKELKQELERMNKIAANFQNALNEPAASSQKIVAEEAVTSVEHQLSMCCNAREVMTN

Query:  DYVQLKRKYPKMSTNFVIWRDEYRILRLNYDSVREHVEQEAEKLRQIARMVDRFATHATTLRQGIIPIRPGSNEFS
        DY QL  KY +MS +F++W+DEY  LR  YD     +E+ AEKLRQ+A M D+F+  A TLRQG+IP R  + E S
Subjt:  DYVQLKRKYPKMSTNFVIWRDEYRILRLNYDSVREHVEQEAEKLRQIARMVDRFATHATTLRQGIIPIRPGSNEFS

A0A5A7TXA1 Glial fibrillary acidic protein-like4.0e-2845.45Show/hide
Query:  KQPELERERDSLNIEAIQMKKKNNILLRDIAALHNEAATQNEYIKELKQELERMNKIAANFQNALNEPAASSQKIVAEEAVTSVEHQLSMCCNAREVMTN
        K+ ELE+E DSLN EAIQ++KKN  LLR+IA LH E        K+    +E +      +++ L E  A S+    ++AV S E QL +C  AR+V+T+
Subjt:  KQPELERERDSLNIEAIQMKKKNNILLRDIAALHNEAATQNEYIKELKQELERMNKIAANFQNALNEPAASSQKIVAEEAVTSVEHQLSMCCNAREVMTN

Query:  DYVQLKRKYPKMSTNFVIWRDEYRILRLNYDSVREHVEQEAEKLRQIARMVDRFATHATTLRQGIIPIRPGSNEFS
        DY QL  KY +MS +F++W+DEY  LR  YD     +E+ AEKLRQ+AR+ D+F+  A TLRQG+IP R    E S
Subjt:  DYVQLKRKYPKMSTNFVIWRDEYRILRLNYDSVREHVEQEAEKLRQIARMVDRFATHATTLRQGIIPIRPGSNEFS

A0A5A7U875 Glial fibrillary acidic protein-like1.2e-2746.24Show/hide
Query:  ELERERDSLNIEAIQMKKKNNILLRDIAALHNEAATQNEYIKELKQELERMNKIAANFQNALNEPAASSQKIVAEEAVTSVEHQLSMCCNAREVMTNDYV
        ELE+  DSLN +AIQM+KKN  LLR+IA LH E   +N  +     E+E + +    +++ + E  A  +    +EAV S E QL +C  AR+V TNDY 
Subjt:  ELERERDSLNIEAIQMKKKNNILLRDIAALHNEAATQNEYIKELKQELERMNKIAANFQNALNEPAASSQKIVAEEAVTSVEHQLSMCCNAREVMTNDYV

Query:  QLKRKYPKMSTNFVIWRDEYRILRLNYDSVREHVEQEAEKLRQIARMVDRFATHATTLRQGIIPIRPGSNEFS
        QL   Y +MS +F+IWR+EY  LR  YD  R  +EQ  EKLRQ+ARM D+F   A TL++G+IPIR  + E S
Subjt:  QLKRKYPKMSTNFVIWRDEYRILRLNYDSVREHVEQEAEKLRQIARMVDRFATHATTLRQGIIPIRPGSNEFS

A0A5A7VDD9 Glial fibrillary acidic protein-like3.4e-3546.04Show/hide
Query:  KQPELERERDSLNIEAIQMKKKNNILLRDIAALHNEAATQNEYIKELKQELERMNKIAANFQNALNEPAASSQKIV------------------------
        K+ ELE+E DSLN EAIQM+KKN  LLR+IA LH E   +   I +LK E+E++N IA  FQNAL+E A SSQ+                          
Subjt:  KQPELERERDSLNIEAIQMKKKNNILLRDIAALHNEAATQNEYIKELKQELERMNKIAANFQNALNEPAASSQKIV------------------------

Query:  --AEEAVTSVEHQLSMCCNAREVMTNDYVQLKRKYPKMSTNFVIWRDEYRILRLNYDSVREHVEQEAEKLRQIARMVDRFATHATTLRQGIIPIRPGSNE
           ++AV S E QL +C  AREV+ +DY QL  KY +MS +F++W+DEY  LR  YD     +E+ AEKLRQ+AR+ D+F+  A TLRQG+IP R    E
Subjt:  --AEEAVTSVEHQLSMCCNAREVMTNDYVQLKRKYPKMSTNFVIWRDEYRILRLNYDSVREHVEQEAEKLRQIARMVDRFATHATTLRQGIIPIRPGSNE

Query:  FS
         S
Subjt:  FS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACCAATGCTAAGGTTCATGAAGCAATGGAAGCATGGAAAGCAACCAGAGTTGGAGAGGGAAAGAGATTCTTTGAACATCGAAGCAATCCAAATGAAAAAGAAGAA
CAATATATTGTTAAGAGATATTGCTGCTTTGCACAATGAGGCAGCAACACAAAATGAGTACATTAAAGAACTAAAACAAGAGTTGGAGAGAATGAACAAGATTGCAGCAA
ATTTTCAGAATGCCTTAAATGAGCCGGCCGCATCATCCCAGAAAATTGTTGCAGAGGAAGCTGTTACAAGTGTTGAACACCAACTATCGATGTGTTGCAACGCACGAGAG
GTTATGACAAACGACTATGTTCAATTGAAGAGAAAGTATCCAAAAATGTCAACAAATTTTGTGATATGGAGAGATGAGTATAGAATATTGAGGCTAAATTATGACAGCGT
CAGAGAACATGTAGAACAAGAAGCCGAGAAGTTAAGACAGATAGCAAGGATGGTAGATCGGTTCGCAACACATGCCACAACCCTCCGACAAGGCATCATACCCATACGAC
CTGGCAGCAACGAGTTCTCATTTTCTAGGGATCATAGGGCAATACCTGGGGCGTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAACCAATGCTAAGGTTCATGAAGCAATGGAAGCATGGAAAGCAACCAGAGTTGGAGAGGGAAAGAGATTCTTTGAACATCGAAGCAATCCAAATGAAAAAGAAGAA
CAATATATTGTTAAGAGATATTGCTGCTTTGCACAATGAGGCAGCAACACAAAATGAGTACATTAAAGAACTAAAACAAGAGTTGGAGAGAATGAACAAGATTGCAGCAA
ATTTTCAGAATGCCTTAAATGAGCCGGCCGCATCATCCCAGAAAATTGTTGCAGAGGAAGCTGTTACAAGTGTTGAACACCAACTATCGATGTGTTGCAACGCACGAGAG
GTTATGACAAACGACTATGTTCAATTGAAGAGAAAGTATCCAAAAATGTCAACAAATTTTGTGATATGGAGAGATGAGTATAGAATATTGAGGCTAAATTATGACAGCGT
CAGAGAACATGTAGAACAAGAAGCCGAGAAGTTAAGACAGATAGCAAGGATGGTAGATCGGTTCGCAACACATGCCACAACCCTCCGACAAGGCATCATACCCATACGAC
CTGGCAGCAACGAGTTCTCATTTTCTAGGGATCATAGGGCAATACCTGGGGCGTTTTAG
Protein sequenceShow/hide protein sequence
MKPMLRFMKQWKHGKQPELERERDSLNIEAIQMKKKNNILLRDIAALHNEAATQNEYIKELKQELERMNKIAANFQNALNEPAASSQKIVAEEAVTSVEHQLSMCCNARE
VMTNDYVQLKRKYPKMSTNFVIWRDEYRILRLNYDSVREHVEQEAEKLRQIARMVDRFATHATTLRQGIIPIRPGSNEFSFSRDHRAIPGAF