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Lsi04G009660 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G009660
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGag-pro-like protein
Genome locationchr04:10144222..10144443
RNA-Seq ExpressionLsi04G009660
SyntenyLsi04G009660
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045605.1 Gag-pro-like protein [Cucumis melo var. makuwa]6.4e-1562.5Show/hide
Query:  EPLIVHYEQKPSIIPCIQMPKIMIVEVPSPFAYKDSRDVPRRYECQFITNSVNSAATGGMTRSG
        +PL++HYE+KPSI+  IQ PK M +E+PSPFAYKD+  VP +YECQFITN+V S    G+TRSG
Subjt:  EPLIVHYEQKPSIIPCIQMPKIMIVEVPSPFAYKDSRDVPRRYECQFITNSVNSAATGGMTRSG

KAA0046608.1 uncharacterized protein E6C27_scaffold114G001540 [Cucumis melo var. makuwa]1.1e-1462.12Show/hide
Query:  MREPLIVHYEQKPSIIPCIQMPKIMIVEVPSPFAYKDSRDVPRRYECQFITNSVNSAATGGMTRSG
        M +PL++HYE+K SI+  IQ PK M VE+P PFAYKD+  VP +YECQFIT++V SA  GG+TRSG
Subjt:  MREPLIVHYEQKPSIIPCIQMPKIMIVEVPSPFAYKDSRDVPRRYECQFITNSVNSAATGGMTRSG

KAA0061241.1 uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa]3.8e-1562.12Show/hide
Query:  MREPLIVHYEQKPSIIPCIQMPKIMIVEVPSPFAYKDSRDVPRRYECQFITNSVNSAATGGMTRSG
        M +P ++HYE+KPSI+  IQ PK M VE+P PFAYKD+  VP +YECQFIT++V SA  GG+TRSG
Subjt:  MREPLIVHYEQKPSIIPCIQMPKIMIVEVPSPFAYKDSRDVPRRYECQFITNSVNSAATGGMTRSG

KAA0065293.1 uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa]5.5e-1460.61Show/hide
Query:  MREPLIVHYEQKPSIIPCIQMPKIMIVEVPSPFAYKDSRDVPRRYECQFITNSVNSAATGGMTRSG
        M +PL++HYE+KPSI+  IQ PK M VE+P PFAYKD+  VP +YECQFIT++V  A   G+TRSG
Subjt:  MREPLIVHYEQKPSIIPCIQMPKIMIVEVPSPFAYKDSRDVPRRYECQFITNSVNSAATGGMTRSG

TYK05801.1 Gag-pro-like protein [Cucumis melo var. makuwa]3.8e-1560.61Show/hide
Query:  MREPLIVHYEQKPSIIPCIQMPKIMIVEVPSPFAYKDSRDVPRRYECQFITNSVNSAATGGMTRSG
        M +PL++HYE+KPSI+  +Q PK M VE+P PFAYKD+  +P +YECQFIT++V SA  GG+TRSG
Subjt:  MREPLIVHYEQKPSIIPCIQMPKIMIVEVPSPFAYKDSRDVPRRYECQFITNSVNSAATGGMTRSG

TrEMBL top hitse value%identityAlignment
A0A5A7TUT4 Uncharacterized protein5.3e-1562.12Show/hide
Query:  MREPLIVHYEQKPSIIPCIQMPKIMIVEVPSPFAYKDSRDVPRRYECQFITNSVNSAATGGMTRSG
        M +PL++HYE+K SI+  IQ PK M VE+P PFAYKD+  VP +YECQFIT++V SA  GG+TRSG
Subjt:  MREPLIVHYEQKPSIIPCIQMPKIMIVEVPSPFAYKDSRDVPRRYECQFITNSVNSAATGGMTRSG

A0A5A7TW53 Gag-pro-like protein3.1e-1562.5Show/hide
Query:  EPLIVHYEQKPSIIPCIQMPKIMIVEVPSPFAYKDSRDVPRRYECQFITNSVNSAATGGMTRSG
        +PL++HYE+KPSI+  IQ PK M +E+PSPFAYKD+  VP +YECQFITN+V S    G+TRSG
Subjt:  EPLIVHYEQKPSIIPCIQMPKIMIVEVPSPFAYKDSRDVPRRYECQFITNSVNSAATGGMTRSG

A0A5A7V681 Retrotrans_gag domain-containing protein1.8e-1562.12Show/hide
Query:  MREPLIVHYEQKPSIIPCIQMPKIMIVEVPSPFAYKDSRDVPRRYECQFITNSVNSAATGGMTRSG
        M +P ++HYE+KPSI+  IQ PK M VE+P PFAYKD+  VP +YECQFIT++V SA  GG+TRSG
Subjt:  MREPLIVHYEQKPSIIPCIQMPKIMIVEVPSPFAYKDSRDVPRRYECQFITNSVNSAATGGMTRSG

A0A5A7VAU5 Uncharacterized protein2.6e-1460.61Show/hide
Query:  MREPLIVHYEQKPSIIPCIQMPKIMIVEVPSPFAYKDSRDVPRRYECQFITNSVNSAATGGMTRSG
        M +PL++HYE+KPSI+  IQ PK M VE+P PFAYKD+  VP +YECQFIT++V  A   G+TRSG
Subjt:  MREPLIVHYEQKPSIIPCIQMPKIMIVEVPSPFAYKDSRDVPRRYECQFITNSVNSAATGGMTRSG

A0A5D3C1I2 Gag-pro-like protein1.8e-1560.61Show/hide
Query:  MREPLIVHYEQKPSIIPCIQMPKIMIVEVPSPFAYKDSRDVPRRYECQFITNSVNSAATGGMTRSG
        M +PL++HYE+KPSI+  +Q PK M VE+P PFAYKD+  +P +YECQFIT++V SA  GG+TRSG
Subjt:  MREPLIVHYEQKPSIIPCIQMPKIMIVEVPSPFAYKDSRDVPRRYECQFITNSVNSAATGGMTRSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAGAGCCATTAATCGTCCATTATGAGCAGAAGCCGAGTATTATTCCATGTATCCAGATGCCTAAGATAATGATCGTTGAAGTACCAAGTCCTTTTGCTTATAAGGA
TAGTCGAGATGTACCAAGGAGGTACGAGTGCCAATTCATTACAAATAGTGTTAATTCTGCAGCGACTGGAGGGATGACTCGTAGTGGAGATGTTATACACCGGATAATCT
GA
mRNA sequenceShow/hide mRNA sequence
ATGCGAGAGCCATTAATCGTCCATTATGAGCAGAAGCCGAGTATTATTCCATGTATCCAGATGCCTAAGATAATGATCGTTGAAGTACCAAGTCCTTTTGCTTATAAGGA
TAGTCGAGATGTACCAAGGAGGTACGAGTGCCAATTCATTACAAATAGTGTTAATTCTGCAGCGACTGGAGGGATGACTCGTAGTGGAGATGTTATACACCGGATAATCT
GA
Protein sequenceShow/hide protein sequence
MREPLIVHYEQKPSIIPCIQMPKIMIVEVPSPFAYKDSRDVPRRYECQFITNSVNSAATGGMTRSGDVIHRII