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Lsi04G009710 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G009710
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein yippee-like
Genome locationchr04:10237442..10239996
RNA-Seq ExpressionLsi04G009710
SyntenyLsi04G009710
Gene Ontology termsNA
InterPro domainsIPR034751 - Yippee domain
IPR039058 - Yippee family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149238.1 protein yippee-like isoform X3 [Cucumis sativus]5.0e-2451.09Show/hide
Query:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKV---------------------------------------------
        MGRLFVVNLEGQIYSCK+CRTHLALY+DIISK        SFHSRHGKAYLFNKV                                             
Subjt:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKV---------------------------------------------

Query:  ----------FKVVGPDESSHWVSHEADAGGSEGDDV
                  FKV+GPDESSHWVSHEAD GGSEGDDV
Subjt:  ----------FKVVGPDESSHWVSHEADAGGSEGDDV

XP_008463228.1 PREDICTED: protein yippee-like [Cucumis melo]1.9e-2352.17Show/hide
Query:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKV---------------------------------------------
        MGRLFVVNLEGQIYSCK+CRTHLALYEDIISK        SFHSRHGKAYLFNKV                                             
Subjt:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKV---------------------------------------------

Query:  ----------FKVVGPDESSHW-VSHEADAGGSEGDDV
                  FKV+GPDESSHW VSHEADAGGSEGDDV
Subjt:  ----------FKVVGPDESSHW-VSHEADAGGSEGDDV

XP_031740893.1 protein yippee-like isoform X1 [Cucumis sativus]1.0e-2141.95Show/hide
Query:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGL-------------------------------------SFHSRHGKAYLFNKV--------
        MGRLFVVNLEGQIYSCK+CRTHLALY+DIISKE G K                                        SFHSRHGKAYLFNKV        
Subjt:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGL-------------------------------------SFHSRHGKAYLFNKV--------

Query:  -----------------------------------------------FKVVGPDESSHWVSHEADAGGSEGDDV
                                                       FKV+GPDESSHWVSHEAD GGSEGDDV
Subjt:  -----------------------------------------------FKVVGPDESSHWVSHEADAGGSEGDDV

XP_038893239.1 protein yippee-like isoform X1 [Benincasa hispida]1.3e-2755.47Show/hide
Query:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKV---------------------------------------------
        MGRLFVVNLEGQIYSCKYCRTHLALY+DIISKEP TKGGLSFHSRHGKAYLFNKV                                             
Subjt:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKV---------------------------------------------

Query:  ----------FKVVGPDESSHWVSHEADAGGSEGDDV
                  FKV+GPDE+SH VSHEADAGGS GDDV
Subjt:  ----------FKVVGPDESSHWVSHEADAGGSEGDDV

XP_038893240.1 protein yippee-like isoform X2 [Benincasa hispida]5.2e-2150.36Show/hide
Query:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKV---------------------------------------------
        MGRLFVVNLEGQIYSCKYCRTHLALY+DIISK        SFHSRHGKAYLFNKV                                             
Subjt:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKV---------------------------------------------

Query:  ----------FKVVGPDESSHWVSHEADAGGSEGDDV
                  FKV+GPDE+SH VSHEADAGGS GDDV
Subjt:  ----------FKVVGPDESSHWVSHEADAGGSEGDDV

TrEMBL top hitse value%identityAlignment
A0A0A0KQH0 Yippee domain-containing protein2.4e-2451.09Show/hide
Query:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKV---------------------------------------------
        MGRLFVVNLEGQIYSCK+CRTHLALY+DIISK        SFHSRHGKAYLFNKV                                             
Subjt:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKV---------------------------------------------

Query:  ----------FKVVGPDESSHWVSHEADAGGSEGDDV
                  FKV+GPDESSHWVSHEAD GGSEGDDV
Subjt:  ----------FKVVGPDESSHWVSHEADAGGSEGDDV

A0A1S4E425 Protein yippee-like9.2e-2452.17Show/hide
Query:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKV---------------------------------------------
        MGRLFVVNLEGQIYSCK+CRTHLALYEDIISK        SFHSRHGKAYLFNKV                                             
Subjt:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKV---------------------------------------------

Query:  ----------FKVVGPDESSHW-VSHEADAGGSEGDDV
                  FKV+GPDESSHW VSHEADAGGSEGDDV
Subjt:  ----------FKVVGPDESSHW-VSHEADAGGSEGDDV

A0A2C9VMI3 Protein yippee-like8.9e-1943.8Show/hide
Query:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKV---------------------------------------------
        MGRLFVVNLEG++YSCK+CRTHLALYEDI+SK        SFH RHGKAYLFNKV                                             
Subjt:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKV---------------------------------------------

Query:  ----------FKVVGPDESSHWVSHEADAGGSEGDDV
                  FKV GPD SS+WV+HEA  GGS+ D+V
Subjt:  ----------FKVVGPDESSHWVSHEADAGGSEGDDV

A0A5D3BCE7 Protein yippee-like9.2e-2452.17Show/hide
Query:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKV---------------------------------------------
        MGRLFVVNLEGQIYSCK+CRTHLALYEDIISK        SFHSRHGKAYLFNKV                                             
Subjt:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKV---------------------------------------------

Query:  ----------FKVVGPDESSHW-VSHEADAGGSEGDDV
                  FKV+GPDESSHW VSHEADAGGSEGDDV
Subjt:  ----------FKVVGPDESSHW-VSHEADAGGSEGDDV

A0A6A6N3A2 Protein yippee-like4.0e-1943.8Show/hide
Query:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKV---------------------------------------------
        MG+LFVVNLEG+IYSCK+CRTHLALYEDI+SK        +FHSRHGKAYLFNKV                                             
Subjt:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKV---------------------------------------------

Query:  ----------FKVVGPDESSHWVSHEADAGGSEGDDV
                  FKV GPD SS+W++HEA  GGS+ DDV
Subjt:  ----------FKVVGPDESSHWVSHEADAGGSEGDDV

SwissProt top hitse value%identityAlignment
P59234 Protein yippee-like2.0e-1536.5Show/hide
Query:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKV---------------------------------------------
        MGRLFV+ LEG+IYSCK+C THLAL E+I+SK        SFH +HGKAYLF+KV                                             
Subjt:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKV---------------------------------------------

Query:  ----------FKVVGPDESSHWVSHEADAGGSEGDDV
                  FK+ GPD S +W SH+    GS+ DDV
Subjt:  ----------FKVVGPDESSHWVSHEADAGGSEGDDV

Q9C777 Protein yippee-like At3g112301.4e-1362.07Show/hide
Query:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKVFKV
        MGRLF+VNLEG+ YSCK+C+T+LAL +D++SK        SF SRHGKAYLF+KV  V
Subjt:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKVFKV

Q9FN32 Protein yippee-like At5g539401.7e-1151.56Show/hide
Query:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKVFKV-VGPDE
        MGR+F V LEG+ Y C++CRTHLAL +D++S+        SFH R GKAYLFN+   + +GP E
Subjt:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKVFKV-VGPDE

Q9LY56 Protein yippee-like At3g558907.3e-1051.56Show/hide
Query:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKVFKV-VGPDE
        MGR+F+V+LEG IY CK C+THL+  +DI+SK        SF  ++G+AYLFN V  V VG  E
Subjt:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKVFKV-VGPDE

Q9SR97 Protein yippee-like At3g089904.1e-1357.81Show/hide
Query:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKVFKV-VGPDE
        MGRLFV++LEG +YSCKYC+TH A+  DIISK        SFH +HG+AYLF+ V  V VG  E
Subjt:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKVFKV-VGPDE

Arabidopsis top hitse value%identityAlignment
AT2G40110.1 Yippee family putative zinc-binding protein4.4e-1872.41Show/hide
Query:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKVFKV
        MGRLFVVNLEG+IYSCK+C+THLA YEDIISK        SFH +HGKAYLFNKV  V
Subjt:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKVFKV

AT2G40110.2 Yippee family putative zinc-binding protein4.4e-1872.41Show/hide
Query:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKVFKV
        MGRLFVVNLEG+IYSCK+C+THLA YEDIISK        SFH +HGKAYLFNKV  V
Subjt:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKVFKV

AT3G08990.1 Yippee family putative zinc-binding protein2.9e-1457.81Show/hide
Query:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKVFKV-VGPDE
        MGRLFV++LEG +YSCKYC+TH A+  DIISK        SFH +HG+AYLF+ V  V VG  E
Subjt:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKVFKV-VGPDE

AT3G11230.1 Yippee family putative zinc-binding protein1.0e-1462.07Show/hide
Query:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKVFKV
        MGRLF+VNLEG+ YSCK+C+T+LAL +D++SK        SF SRHGKAYLF+KV  V
Subjt:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKVFKV

AT3G11230.2 Yippee family putative zinc-binding protein1.0e-1462.07Show/hide
Query:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKVFKV
        MGRLF+VNLEG+ YSCK+C+T+LAL +D++SK        SF SRHGKAYLF+KV  V
Subjt:  MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKVFKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGATTGTTCGTGGTGAATCTGGAAGGGCAGATCTATAGCTGCAAGTACTGCCGGACCCATCTTGCTCTTTACGAAGATATCATTTCCAAGGAACCTGGAACAAA
AGGGGGTCTGTCCTTCCACTCCAGGCATGGAAAAGCTTACCTCTTCAATAAGGTGTTCAAGGTTGTGGGACCTGATGAAAGCAGTCACTGGGTCAGTCATGAAGCAGATG
CTGGTGGAAGTGAAGGAGATGATGTTTGA
mRNA sequenceShow/hide mRNA sequence
GTAGGTTTCTCGTTACAAAAATTCATATCTCGAGTCCCCTGCCCTTCTCTTCTCCCTCTATCTGAACAAGATTTTGTTGGCATATGCGCATCTCAGTAAAAGGATCATCC
AACATTCATAGACGGGACAATGGAAGTTTCACGAATAATGTAGCCAACCATTCTGATTTTGACACAAACTCCTTCATTATCTTCATTCGTCTCCATCTCCAACCCCTTTT
TCTTTAAATTTCGTTTCATTTCAATACCTTTCACAATTCAGAACAAGGGGCTTTACATTCGAATCGTCTTTAGAACTGGGCTTCTTCGCAAAATATAATCAGTGGGAAGT
TTAAGCTTCGAAGCTATGGGGAGATTGTTCGTGGTGAATCTGGAAGGGCAGATCTATAGCTGCAAGTACTGCCGGACCCATCTTGCTCTTTACGAAGATATCATTTCCAA
GGAACCTGGAACAAAAGGGGGTCTGTCCTTCCACTCCAGGCATGGAAAAGCTTACCTCTTCAATAAGGTGTTCAAGGTTGTGGGACCTGATGAAAGCAGTCACTGGGTCA
GTCATGAAGCAGATGCTGGTGGAAGTGAAGGAGATGATGTTTGATTCTGTATTTACTCAATTGTAAATTCTGTAAAACCCTAAAAATATTATAGTTTGAACTTGAATTCT
AAAGATGGTATTACTTCTACTTCATTTCCCCCACCTAAAAATCCTTGATGTTTCATGTTGGGATGAGAATTGAACAATAGTTATTATATCTCCTAGGATAAGTGATGTTG
TAATATTAATACTTTGTGAAGAACATAATATTGTAAAGGTTGCTCTCAATGTTTTACATTTTTTTTTAATGTTGCTTCTA
Protein sequenceShow/hide protein sequence
MGRLFVVNLEGQIYSCKYCRTHLALYEDIISKEPGTKGGLSFHSRHGKAYLFNKVFKVVGPDESSHWVSHEADAGGSEGDDV