; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G009920 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G009920
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionbinding partner of ACD11 1-like
Genome locationchr04:10845808..10852153
RNA-Seq ExpressionLsi04G009920
SyntenyLsi04G009920
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142266.1 binding partner of ACD11 1 [Cucumis sativus]4.7e-9978.34Show/hide
Query:  MSMRTVKVSNISKVTSERDIKEFFSFSGEILCVEMQRETENTQ-----------------------------------------------DKRPTVTEIA
        MSMRTVKVSNISK+TSERDIKEFFSFSGEIL VEMQRE+ENTQ                                               DKR TVT IA
Subjt:  MSMRTVKVSNISKVTSERDIKEFFSFSGEILCVEMQRETENTQ-----------------------------------------------DKRPTVTEIA

Query:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGTALMS
        PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQV EKTKSALAVAEQKATSAGTALMS
Subjt:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGTALMS

Query:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESLYRERTRIINNFAELHLDEPLPGEPAIVPGRQDD
        NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKES+YRERT II+NFAELHLDEPLPGEPAIVP    D
Subjt:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESLYRERTRIINNFAELHLDEPLPGEPAIVPGRQDD

XP_008452423.1 PREDICTED: binding partner of ACD11 1-like isoform X1 [Cucumis melo]2.7e-9978.34Show/hide
Query:  MSMRTVKVSNISKVTSERDIKEFFSFSGEILCVEMQRETENTQ-----------------------------------------------DKRPTVTEIA
        MSMRTVKVSNISK+TSERDIKEFFSFSGEIL VEMQRE+ENTQ                                               DKR TVT IA
Subjt:  MSMRTVKVSNISKVTSERDIKEFFSFSGEILCVEMQRETENTQ-----------------------------------------------DKRPTVTEIA

Query:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGTALMS
        PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQ TSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGTALMS
Subjt:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGTALMS

Query:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESLYRERTRIINNFAELHLDEPLPGEPAIVPGRQDD
        NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKES+YRERT II+NFAELHLDEPLPGEPAIVP    D
Subjt:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESLYRERTRIINNFAELHLDEPLPGEPAIVPGRQDD

XP_008452424.1 PREDICTED: binding partner of ACD11 1-like isoform X2 [Cucumis melo]2.3e-9878.18Show/hide
Query:  MRTVKVSNISKVTSERDIKEFFSFSGEILCVEMQRETENTQ-----------------------------------------------DKRPTVTEIAPN
        MRTVKVSNISK+TSERDIKEFFSFSGEIL VEMQRE+ENTQ                                               DKR TVT IAPN
Subjt:  MRTVKVSNISKVTSERDIKEFFSFSGEILCVEMQRETENTQ-----------------------------------------------DKRPTVTEIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGTALMSNY
        QAEDVVSTMLAKGFILGKDALNKAKAFDERLQ TSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGTALMSNY
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESLYRERTRIINNFAELHLDEPLPGEPAIVPGRQDD
        YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKES+YRERT II+NFAELHLDEPLPGEPAIVP    D
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESLYRERTRIINNFAELHLDEPLPGEPAIVPGRQDD

XP_022990263.1 binding partner of ACD11 1-like [Cucurbita maxima]2.2e-9676.17Show/hide
Query:  MSMRTVKVSNISKVTSERDIKEFFSFSGEILCVEMQRETENTQ-----------------------------------------------DKRPTVTEIA
        MSMRTVKVSNISK TSERDIKEF SFSG+IL VEMQRETENTQ                                               DKR T T IA
Subjt:  MSMRTVKVSNISKVTSERDIKEFFSFSGEILCVEMQRETENTQ-----------------------------------------------DKRPTVTEIA

Query:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGTALMS
        PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKA++AGTALMS
Subjt:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGTALMS

Query:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESLYRERTRIINNFAELHLDEPLPGEPAIVPGRQDD
        NYYVLTGAAWFSNAVTAVTKAAEEVTQMTK KVEKAEEEK+ES+Y ERT IINNFAE HLDEPLPGEPAIVP    D
Subjt:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESLYRERTRIINNFAELHLDEPLPGEPAIVPGRQDD

XP_038891484.1 binding partner of ACD11 1 [Benincasa hispida]4.2e-10079.06Show/hide
Query:  MSMRTVKVSNISKVTSERDIKEFFSFSGEILCVEMQRETENTQ-----------------------------------------------DKRPTVTEIA
        MSMRTVKVSNISKVTSERDIKEFFSFSGEIL VEMQRETENTQ                                               DK+ TV  IA
Subjt:  MSMRTVKVSNISKVTSERDIKEFFSFSGEILCVEMQRETENTQ-----------------------------------------------DKRPTVTEIA

Query:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGTALMS
        PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGTALMS
Subjt:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGTALMS

Query:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESLYRERTRIINNFAELHLDEPLPGEPAIVPGRQDD
        NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKES+YRERT IINNFAELHLDEPLPGEPAIVP    D
Subjt:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESLYRERTRIINNFAELHLDEPLPGEPAIVPGRQDD

TrEMBL top hitse value%identityAlignment
A0A0A0KIR7 RRM domain-containing protein2.3e-9978.34Show/hide
Query:  MSMRTVKVSNISKVTSERDIKEFFSFSGEILCVEMQRETENTQ-----------------------------------------------DKRPTVTEIA
        MSMRTVKVSNISK+TSERDIKEFFSFSGEIL VEMQRE+ENTQ                                               DKR TVT IA
Subjt:  MSMRTVKVSNISKVTSERDIKEFFSFSGEILCVEMQRETENTQ-----------------------------------------------DKRPTVTEIA

Query:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGTALMS
        PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQV EKTKSALAVAEQKATSAGTALMS
Subjt:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGTALMS

Query:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESLYRERTRIINNFAELHLDEPLPGEPAIVPGRQDD
        NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKES+YRERT II+NFAELHLDEPLPGEPAIVP    D
Subjt:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESLYRERTRIINNFAELHLDEPLPGEPAIVPGRQDD

A0A1S3BT66 binding partner of ACD11 1-like isoform X21.1e-9878.18Show/hide
Query:  MRTVKVSNISKVTSERDIKEFFSFSGEILCVEMQRETENTQ-----------------------------------------------DKRPTVTEIAPN
        MRTVKVSNISK+TSERDIKEFFSFSGEIL VEMQRE+ENTQ                                               DKR TVT IAPN
Subjt:  MRTVKVSNISKVTSERDIKEFFSFSGEILCVEMQRETENTQ-----------------------------------------------DKRPTVTEIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGTALMSNY
        QAEDVVSTMLAKGFILGKDALNKAKAFDERLQ TSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGTALMSNY
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESLYRERTRIINNFAELHLDEPLPGEPAIVPGRQDD
        YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKES+YRERT II+NFAELHLDEPLPGEPAIVP    D
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESLYRERTRIINNFAELHLDEPLPGEPAIVPGRQDD

A0A1S3BUX7 binding partner of ACD11 1-like isoform X11.3e-9978.34Show/hide
Query:  MSMRTVKVSNISKVTSERDIKEFFSFSGEILCVEMQRETENTQ-----------------------------------------------DKRPTVTEIA
        MSMRTVKVSNISK+TSERDIKEFFSFSGEIL VEMQRE+ENTQ                                               DKR TVT IA
Subjt:  MSMRTVKVSNISKVTSERDIKEFFSFSGEILCVEMQRETENTQ-----------------------------------------------DKRPTVTEIA

Query:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGTALMS
        PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQ TSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGTALMS
Subjt:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGTALMS

Query:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESLYRERTRIINNFAELHLDEPLPGEPAIVPGRQDD
        NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKES+YRERT II+NFAELHLDEPLPGEPAIVP    D
Subjt:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESLYRERTRIINNFAELHLDEPLPGEPAIVPGRQDD

A0A5A7UTK1 Binding partner of ACD11 1-like isoform X11.1e-9878.18Show/hide
Query:  MRTVKVSNISKVTSERDIKEFFSFSGEILCVEMQRETENTQ-----------------------------------------------DKRPTVTEIAPN
        MRTVKVSNISK+TSERDIKEFFSFSGEIL VEMQRE+ENTQ                                               DKR TVT IAPN
Subjt:  MRTVKVSNISKVTSERDIKEFFSFSGEILCVEMQRETENTQ-----------------------------------------------DKRPTVTEIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGTALMSNY
        QAEDVVSTMLAKGFILGKDALNKAKAFDERLQ TSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGTALMSNY
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESLYRERTRIINNFAELHLDEPLPGEPAIVPGRQDD
        YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKES+YRERT II+NFAELHLDEPLPGEPAIVP    D
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESLYRERTRIINNFAELHLDEPLPGEPAIVPGRQDD

A0A6J1JSR7 binding partner of ACD11 1-like1.1e-9676.17Show/hide
Query:  MSMRTVKVSNISKVTSERDIKEFFSFSGEILCVEMQRETENTQ-----------------------------------------------DKRPTVTEIA
        MSMRTVKVSNISK TSERDIKEF SFSG+IL VEMQRETENTQ                                               DKR T T IA
Subjt:  MSMRTVKVSNISKVTSERDIKEFFSFSGEILCVEMQRETENTQ-----------------------------------------------DKRPTVTEIA

Query:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGTALMS
        PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKA++AGTALMS
Subjt:  PNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGTALMS

Query:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESLYRERTRIINNFAELHLDEPLPGEPAIVPGRQDD
        NYYVLTGAAWFSNAVTAVTKAAEEVTQMTK KVEKAEEEK+ES+Y ERT IINNFAE HLDEPLPGEPAIVP    D
Subjt:  NYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESLYRERTRIINNFAELHLDEPLPGEPAIVPGRQDD

SwissProt top hitse value%identityAlignment
Q9LFD5 Binding partner of ACD11 13.2e-4242.91Show/hide
Query:  MRTVKVSNISKVTSERDIKEFFSFSGEILCVEMQ----------RETENTQD----------KRPTVTEIAPN---------------------QAEDVV
        +R+VKV N+S   +E DIKEFFSFSGE+  +++Q          +ET+  +            +  + E+APN                     +AEDVV
Subjt:  MRTVKVSNISKVTSERDIKEFFSFSGEILCVEMQ----------RETENTQD----------KRPTVTEIAPN---------------------QAEDVV

Query:  STMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGTALMSNYYVLTGA
        S+MLAKGFILGKDA+ KAKAFDE+   TS A+A VAS+D+K+G+++K+TAGT++VNEK++ +D+ FQVTE+TKS  A AEQ  +SAG+A+M N YVLTG 
Subjt:  STMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGTALMSNYYVLTGA

Query:  AWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESLYRERTRIINNFAELHLDE
        +W + A   V +AA EV Q TK   EK E E+     + + ++   ++ +H  E
Subjt:  AWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESLYRERTRIINNFAELHLDE

Arabidopsis top hitse value%identityAlignment
AT1G67950.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.7e-4444.03Show/hide
Query:  MRTVKVSNISKVTSERDIKEFFSFSGEILCVEMQRETENTQ------------------------DKRPTVT-----EIAP----------------NQA
        ++TVK+SN+S + S++D+KEFFSFSG+I  VEM+ ET+ +Q                        D R ++T     ++ P                 +A
Subjt:  MRTVKVSNISKVTSERDIKEFFSFSGEILCVEMQRETENTQ------------------------DKRPTVT-----EIAP----------------NQA

Query:  EDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGTALMSNYYV
        EDVV+ M+ +G+ LGKDA+ KAKAFD+R  L SNASAT+AS+D KMG++EK++ GT VVNEK+R++DE +QV E TKSALA AE+ A SA TALM+N YV
Subjt:  EDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGTALMSNYYV

Query:  LTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESLYRERTRIINNFAELHLDEPLPGEPAIVP
         +GA+WFSNA  AVTKA +E       KVE   E +KE               + LD   P  PA+VP
Subjt:  LTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESLYRERTRIINNFAELHLDEPLPGEPAIVP

AT1G67950.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.7e-4444.03Show/hide
Query:  MRTVKVSNISKVTSERDIKEFFSFSGEILCVEMQRETENTQ------------------------DKRPTVT-----EIAP----------------NQA
        ++TVK+SN+S + S++D+KEFFSFSG+I  VEM+ ET+ +Q                        D R ++T     ++ P                 +A
Subjt:  MRTVKVSNISKVTSERDIKEFFSFSGEILCVEMQRETENTQ------------------------DKRPTVT-----EIAP----------------NQA

Query:  EDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGTALMSNYYV
        EDVV+ M+ +G+ LGKDA+ KAKAFD+R  L SNASAT+AS+D KMG++EK++ GT VVNEK+R++DE +QV E TKSALA AE+ A SA TALM+N YV
Subjt:  EDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGTALMSNYYV

Query:  LTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESLYRERTRIINNFAELHLDEPLPGEPAIVP
         +GA+WFSNA  AVTKA +E       KVE   E +KE               + LD   P  PA+VP
Subjt:  LTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESLYRERTRIINNFAELHLDEPLPGEPAIVP

AT1G67950.3 RNA-binding (RRM/RBD/RNP motifs) family protein3.5e-4443.87Show/hide
Query:  MRTVKVSNISKVTSERDIKEFFSFSGEILCVEMQRETENTQ------------------------DKRPTVT-----EIAP-----------------NQ
        ++TVK+SN+S + S++D+KEFFSFSG+I  VEM+ ET+ +Q                        D R ++T     ++ P                  +
Subjt:  MRTVKVSNISKVTSERDIKEFFSFSGEILCVEMQRETENTQ------------------------DKRPTVT-----EIAP-----------------NQ

Query:  AEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGTALMSNYY
        AEDVV+ M+ +G+ LGKDA+ KAKAFD+R  L SNASAT+AS+D KMG++EK++ GT VVNEK+R++DE +QV E TKSALA AE+ A SA TALM+N Y
Subjt:  AEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGTALMSNYY

Query:  VLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESLYRERTRIINNFAELHLDEPLPGEPAIVP
        V +GA+WFSNA  AVTKA +E       KVE   E +KE               + LD   P  PA+VP
Subjt:  VLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESLYRERTRIINNFAELHLDEPLPGEPAIVP

AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.3e-5046.62Show/hide
Query:  MSMRTVKVSNISKVTSERDIKEFFSFSGEILCVEMQRETENTQ---------------------------------------------------DKRPTV
        M+M TVKVSN+S   ++RD+KEFFSFSG+IL +E Q ETE T+                                                   +K P  
Subjt:  MSMRTVKVSNISKVTSERDIKEFFSFSGEILCVEMQRETENTQ---------------------------------------------------DKRPTV

Query:  TEIAPNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGT
         +    +AEDVVS+MLAKGFILGKDA+ KAK+ DE+ QLTS ASA VAS D+K+G T+KI  GT VV EKVRE+D+ +QV+EKTKSA+A AEQ  ++AG+
Subjt:  TEIAPNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGT

Query:  ALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESLYRERTRIINNFAELHLDE
        A+M N YVLTGA W + A   V KAAEEV Q  K KV  AEEE K        ++++ FA +HL E
Subjt:  ALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESLYRERTRIINNFAELHLDE

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.3e-4644.81Show/hide
Query:  MSMRTVKVSNISKVTSERDIKEFFSFSGEILCVEMQRETENTQ------------------------DKRPTVT-----EIAPN----------------
        MSM TVKVSN+S   +ERD+KEFFSFSG+I  +E Q E + ++                        D   TVT     ++ P+                
Subjt:  MSMRTVKVSNISKVTSERDIKEFFSFSGEILCVEMQRETENTQ------------------------DKRPTVT-----EIAPN----------------

Query:  ----------QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKAT
                  +AEDVVS M++KGF+LGKDA+ KAK+ DE+ QLTS ASA V S D+++G TEKI  GT VV+EKV+E+D+ FQVTEKTKSA+A AEQ  +
Subjt:  ----------QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKAT

Query:  SAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESLYRERTRIINNFAELHLDE
        +AG+A+M N YVLTGA W + A   V+KAAEEV Q  K KV  AEEE++     E+ ++++  A +HL E
Subjt:  SAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESLYRERTRIINNFAELHLDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATGAGAACTGTCAAAGTCAGCAATATCTCAAAAGTTACTTCTGAGAGAGACATCAAAGAATTCTTTTCATTCTCTGGTGAAATCCTATGTGTTGAAATGCAAAG
AGAAACTGAAAATACTCAGGATAAAAGGCCAACTGTTACTGAGATTGCTCCGAATCAAGCTGAAGACGTTGTAAGTACAATGCTTGCTAAGGGTTTCATCTTGGGGAAGG
ATGCTCTAAACAAAGCAAAAGCGTTCGACGAACGACTCCAATTGACATCGAATGCTTCTGCAACCGTTGCTTCCATTGACCGCAAGATGGGAATAACCGAGAAAATAACT
GCAGGCACAGCAGTGGTGAATGAAAAGGTCAGGGAGATGGATGAAATGTTCCAAGTTACAGAAAAGACGAAATCCGCCCTTGCAGTTGCCGAGCAGAAGGCAACGAGTGC
TGGAACCGCGCTTATGAGCAATTATTATGTGTTAACTGGAGCAGCATGGTTTTCAAATGCTGTAACTGCAGTTACAAAAGCTGCTGAGGAAGTGACCCAAATGACAAAGG
TAAAAGTCGAGAAAGCCGAGGAGGAGAAAAAGGAGAGTTTATACCGCGAAAGAACCAGGATCATCAATAACTTCGCCGAGCTCCATCTCGACGAGCCTTTACCCGGAGAG
CCTGCTATTGTTCCAGGACGCCAAGATGACAACTGCAGCTGCAATAGTTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAAAAAAAAAGTCAACAGTAAAACATTGTCCCTCTCCGGTAGCGCTGGTACTCCAAAACAAAAAAAATGAAAGAAGTTTGTAAAGAAACCGTATCCGTTTCCAA
AACCCCAAAAAAACACTAAATTTCTCTAAACAATTTCTTCTCTTCTATCCGCCGCTGGATCTCTCATCCAATCAACCATTTCATCATCTTCCTTCTTCTCTAAATCTTTC
TTTTGCTTTTCAGAAATGTCGATGAGAACTGTCAAAGTCAGCAATATCTCAAAAGTTACTTCTGAGAGAGACATCAAAGAATTCTTTTCATTCTCTGGTGAAATCCTATG
TGTTGAAATGCAAAGAGAAACTGAAAATACTCAGGATAAAAGGCCAACTGTTACTGAGATTGCTCCGAATCAAGCTGAAGACGTTGTAAGTACAATGCTTGCTAAGGGTT
TCATCTTGGGGAAGGATGCTCTAAACAAAGCAAAAGCGTTCGACGAACGACTCCAATTGACATCGAATGCTTCTGCAACCGTTGCTTCCATTGACCGCAAGATGGGAATA
ACCGAGAAAATAACTGCAGGCACAGCAGTGGTGAATGAAAAGGTCAGGGAGATGGATGAAATGTTCCAAGTTACAGAAAAGACGAAATCCGCCCTTGCAGTTGCCGAGCA
GAAGGCAACGAGTGCTGGAACCGCGCTTATGAGCAATTATTATGTGTTAACTGGAGCAGCATGGTTTTCAAATGCTGTAACTGCAGTTACAAAAGCTGCTGAGGAAGTGA
CCCAAATGACAAAGGTAAAAGTCGAGAAAGCCGAGGAGGAGAAAAAGGAGAGTTTATACCGCGAAAGAACCAGGATCATCAATAACTTCGCCGAGCTCCATCTCGACGAG
CCTTTACCCGGAGAGCCTGCTATTGTTCCAGGACGCCAAGATGACAACTGCAGCTGCAATAGTTGAAGGGAAATAACAAAATTGGACTTTGTCTGAAAGAACCAGCTCTG
CGAAGTTCTTAGCTCGATTCTCCAAATCTGAGTCAGCTCCAGCAGCTTTCAGGTAGAACCTGTGATAATTTTCAAGAAAAGAAAATTAAATAAAGCATGTTATTCGTAGT
AGATTCAAATTGTTAATGGGCGGAAGGAGTTTATTAAAAATGGATGCACGAAGAGGAAAACTTTTTCCCTTCCCACAAATGGTCAAGTTAGTCAAAGGAAGATGTACCAC
AAGAAGTTGTAAACAGTTGGCAAGAAACAATGGAACTTTAGGACTTCTTCAACAAGCCATTCCATGCCAACAACTTCAGGTCTTCTGTACGTGTTGCTCCCTACACGGAT
ATTCCTTTGCTGCACCCTTGAAATGCCCAAAAATAAAACCAATCAGTCCAATCATAGCTTTATAAATATATCCACCAAGCTCGAGACACCCACCAGAGTACATACCTTCT
CAATTCTCAAGCTCTATTTAAT
Protein sequenceShow/hide protein sequence
MSMRTVKVSNISKVTSERDIKEFFSFSGEILCVEMQRETENTQDKRPTVTEIAPNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKIT
AGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKATSAGTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKVKVEKAEEEKKESLYRERTRIINNFAELHLDEPLPGE
PAIVPGRQDDNCSCNS