; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi04G010030 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G010030
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionEnzymatic polyprotein
Genome locationchr04:11206345..11207346
RNA-Seq ExpressionLsi04G010030
SyntenyLsi04G010030
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056776.1 Enzymatic polyprotein [Cucumis melo var. makuwa]1.3e-3031.18Show/hide
Query:  DMVNQLVYTLMKHFVGRTTVYSNQATEALLKMRCRKMNDFKWYKDVFMACVYNLTSCRDEIWKRKFMEGLPPYIAEKFYQRRSESFEEGQINWNALAYGD
        DMVNQL+YT+ KHF+G T ++ N ATEALL ++C KM+ +KWYKD FMA +Y LT+C  +IWK+KF+EGLP YI++KFYQ  + +    QI+W  L YGD
Subjt:  DMVNQLVYTLMKHFVGRTTVYSNQATEALLKMRCRKMNDFKWYKDVFMACVYNLTSCRDEIWKRKFMEGLPPYIAEKFYQRRSESFEEGQINWNALAYGD

Query:  ITNNIQALC-------------------------------------------------------------------------------------------
        I++ +Q +C                                                                                           
Subjt:  ITNNIQALC-------------------------------------------------------------------------------------------

Query:  -----------LKD---------------------------------------------SSSEAESFDSSQYSDD--AIPCTG-----C---INVLTRDQ
                   LKD                                             SSSE E +  S  SDD  AIPCTG     C   INV+T+DQ
Subjt:  -----------LKD---------------------------------------------SSSEAESFDSSQYSDD--AIPCTG-----C---INVLTRDQ

Query:  EHMLDLIEELPDEASRRTALLKLCNSLEEQKSKAQEFEPI
        E + DLIE++PDE ++RT LLKL  SLEEQ  +     PI
Subjt:  EHMLDLIEELPDEASRRTALLKLCNSLEEQKSKAQEFEPI

KAA0058440.1 hypothetical protein E6C27_scaffold132G00230 [Cucumis melo var. makuwa]2.5e-3133.67Show/hide
Query:  DMVNQLVYTLMKHFVGRTTVYSNQATEALLKMRCRKMNDFKWYKDVFMACVYNLTSCRDEIWKRKFMEGLPPYIAEKFYQRRSESFEEGQINWNALAYGD
        DMVNQL+YT+ KHF+G   ++ N ATEALL ++C KM+ +KWYKD FMA +Y LT+C   IWK KF+EGLP YI++KFYQ  + +    QI+W  L Y D
Subjt:  DMVNQLVYTLMKHFVGRTTVYSNQATEALLKMRCRKMNDFKWYKDVFMACVYNLTSCRDEIWKRKFMEGLPPYIAEKFYQRRSESFEEGQINWNALAYGD

Query:  ITNNIQALC-------------LKD---------------------------------------------------------------------------
        I++ +Q +C             +KD                                                                           
Subjt:  ITNNIQALC-------------LKD---------------------------------------------------------------------------

Query:  -------------------SSSEAESFDSSQYSDD--AIPCTG-----C---INVLTRDQEHMLDLIEELPDEASRRTALLKLCNSLEEQKSKAQEFEPI
                           SSSE E +  S+ SDD  AIPCTG     C   INV+T+DQ+ + DLIE++PD  ++RT LLKL  SLEEQ  +     PI
Subjt:  -------------------SSSEAESFDSSQYSDD--AIPCTG-----C---INVLTRDQEHMLDLIEELPDEASRRTALLKLCNSLEEQKSKAQEFEPI

TYJ96702.1 hypothetical protein E5676_scaffold535G00180 [Cucumis melo var. makuwa]2.5e-3133.67Show/hide
Query:  DMVNQLVYTLMKHFVGRTTVYSNQATEALLKMRCRKMNDFKWYKDVFMACVYNLTSCRDEIWKRKFMEGLPPYIAEKFYQRRSESFEEGQINWNALAYGD
        DMVNQL+YT+ KHF+G   ++ N ATEALL ++C KM+ +KWYKD FMA +Y LT+C   IWK KF+EGLP YI++KFYQ  + +    QI+W  L Y D
Subjt:  DMVNQLVYTLMKHFVGRTTVYSNQATEALLKMRCRKMNDFKWYKDVFMACVYNLTSCRDEIWKRKFMEGLPPYIAEKFYQRRSESFEEGQINWNALAYGD

Query:  ITNNIQALC-------------LKD---------------------------------------------------------------------------
        I++ +Q +C             +KD                                                                           
Subjt:  ITNNIQALC-------------LKD---------------------------------------------------------------------------

Query:  -------------------SSSEAESFDSSQYSDD--AIPCTG-----C---INVLTRDQEHMLDLIEELPDEASRRTALLKLCNSLEEQKSKAQEFEPI
                           SSSE E +  S+ SDD  AIPCTG     C   INV+T+DQ+ + DLIE++PD  ++RT LLKL  SLEEQ  +     PI
Subjt:  -------------------SSSEAESFDSSQYSDD--AIPCTG-----C---INVLTRDQEHMLDLIEELPDEASRRTALLKLCNSLEEQKSKAQEFEPI

TYJ97599.1 Enzymatic polyprotein [Cucumis melo var. makuwa]1.3e-3031.18Show/hide
Query:  DMVNQLVYTLMKHFVGRTTVYSNQATEALLKMRCRKMNDFKWYKDVFMACVYNLTSCRDEIWKRKFMEGLPPYIAEKFYQRRSESFEEGQINWNALAYGD
        DMVNQL+YT+ KHF+G T ++ N ATEALL ++C KM+ +KWYKD FMA +Y LT+C  +IWK+KF+EGLP YI++KFYQ  + +    QI+W  L YGD
Subjt:  DMVNQLVYTLMKHFVGRTTVYSNQATEALLKMRCRKMNDFKWYKDVFMACVYNLTSCRDEIWKRKFMEGLPPYIAEKFYQRRSESFEEGQINWNALAYGD

Query:  ITNNIQALC-------------------------------------------------------------------------------------------
        I++ +Q +C                                                                                           
Subjt:  ITNNIQALC-------------------------------------------------------------------------------------------

Query:  -----------LKD---------------------------------------------SSSEAESFDSSQYSDD--AIPCTG-----C---INVLTRDQ
                   LKD                                             SSSE E +  S  SDD  AIPCTG     C   INV+T+DQ
Subjt:  -----------LKD---------------------------------------------SSSEAESFDSSQYSDD--AIPCTG-----C---INVLTRDQ

Query:  EHMLDLIEELPDEASRRTALLKLCNSLEEQKSKAQEFEPI
        E + DLIE++PDE ++RT LLKL  SLEEQ  +     PI
Subjt:  EHMLDLIEELPDEASRRTALLKLCNSLEEQKSKAQEFEPI

TYK23160.1 hypothetical protein E5676_scaffold142G001850 [Cucumis melo var. makuwa]5.5e-3433.46Show/hide
Query:  VNQLVYTLMKHFVGRTTVYSNQATEALLKMRCRKMNDFKWYKDVFMACVYNLTSCRDEIWKRKFMEGLPPYIAEKFYQRRSESFEEGQINWNALAYGDIT
        VN +VY  +KHFVGRTT+YS+Q+ EALL M+C KM+DFKWYKD FM+ +YN T CRD +WK K++EGL  Y+ EKFY     +     I+W  ++YGDI 
Subjt:  VNQLVYTLMKHFVGRTTVYSNQATEALLKMRCRKMNDFKWYKDVFMACVYNLTSCRDEIWKRKFMEGLPPYIAEKFYQRRSESFEEGQINWNALAYGDIT

Query:  NNIQALC--------------------------------------------------------------------------------------------L
        + IQ +C                                                                                            L
Subjt:  NNIQALC--------------------------------------------------------------------------------------------L

Query:  KDSSSEAESFDSSQYSDDAIPCTGCINVLTRDQEHMLDLIEELPDEASRRTALLKLCNSLEEQKSKAQE
        ++SS E  S ++   +++AIPC+ CINVLT  Q+ +LD+IEE+ DEA R+  LL+LC  LE    K ++
Subjt:  KDSSSEAESFDSSQYSDDAIPCTGCINVLTRDQEHMLDLIEELPDEASRRTALLKLCNSLEEQKSKAQE

TrEMBL top hitse value%identityAlignment
A0A5A7UR29 Enzymatic polyprotein6.1e-3131.18Show/hide
Query:  DMVNQLVYTLMKHFVGRTTVYSNQATEALLKMRCRKMNDFKWYKDVFMACVYNLTSCRDEIWKRKFMEGLPPYIAEKFYQRRSESFEEGQINWNALAYGD
        DMVNQL+YT+ KHF+G T ++ N ATEALL ++C KM+ +KWYKD FMA +Y LT+C  +IWK+KF+EGLP YI++KFYQ  + +    QI+W  L YGD
Subjt:  DMVNQLVYTLMKHFVGRTTVYSNQATEALLKMRCRKMNDFKWYKDVFMACVYNLTSCRDEIWKRKFMEGLPPYIAEKFYQRRSESFEEGQINWNALAYGD

Query:  ITNNIQALC-------------------------------------------------------------------------------------------
        I++ +Q +C                                                                                           
Subjt:  ITNNIQALC-------------------------------------------------------------------------------------------

Query:  -----------LKD---------------------------------------------SSSEAESFDSSQYSDD--AIPCTG-----C---INVLTRDQ
                   LKD                                             SSSE E +  S  SDD  AIPCTG     C   INV+T+DQ
Subjt:  -----------LKD---------------------------------------------SSSEAESFDSSQYSDD--AIPCTG-----C---INVLTRDQ

Query:  EHMLDLIEELPDEASRRTALLKLCNSLEEQKSKAQEFEPI
        E + DLIE++PDE ++RT LLKL  SLEEQ  +     PI
Subjt:  EHMLDLIEELPDEASRRTALLKLCNSLEEQKSKAQEFEPI

A0A5A7UTK4 Uncharacterized protein1.2e-3133.67Show/hide
Query:  DMVNQLVYTLMKHFVGRTTVYSNQATEALLKMRCRKMNDFKWYKDVFMACVYNLTSCRDEIWKRKFMEGLPPYIAEKFYQRRSESFEEGQINWNALAYGD
        DMVNQL+YT+ KHF+G   ++ N ATEALL ++C KM+ +KWYKD FMA +Y LT+C   IWK KF+EGLP YI++KFYQ  + +    QI+W  L Y D
Subjt:  DMVNQLVYTLMKHFVGRTTVYSNQATEALLKMRCRKMNDFKWYKDVFMACVYNLTSCRDEIWKRKFMEGLPPYIAEKFYQRRSESFEEGQINWNALAYGD

Query:  ITNNIQALC-------------LKD---------------------------------------------------------------------------
        I++ +Q +C             +KD                                                                           
Subjt:  ITNNIQALC-------------LKD---------------------------------------------------------------------------

Query:  -------------------SSSEAESFDSSQYSDD--AIPCTG-----C---INVLTRDQEHMLDLIEELPDEASRRTALLKLCNSLEEQKSKAQEFEPI
                           SSSE E +  S+ SDD  AIPCTG     C   INV+T+DQ+ + DLIE++PD  ++RT LLKL  SLEEQ  +     PI
Subjt:  -------------------SSSEAESFDSSQYSDD--AIPCTG-----C---INVLTRDQEHMLDLIEELPDEASRRTALLKLCNSLEEQKSKAQEFEPI

A0A5D3BA08 Uncharacterized protein1.2e-3133.67Show/hide
Query:  DMVNQLVYTLMKHFVGRTTVYSNQATEALLKMRCRKMNDFKWYKDVFMACVYNLTSCRDEIWKRKFMEGLPPYIAEKFYQRRSESFEEGQINWNALAYGD
        DMVNQL+YT+ KHF+G   ++ N ATEALL ++C KM+ +KWYKD FMA +Y LT+C   IWK KF+EGLP YI++KFYQ  + +    QI+W  L Y D
Subjt:  DMVNQLVYTLMKHFVGRTTVYSNQATEALLKMRCRKMNDFKWYKDVFMACVYNLTSCRDEIWKRKFMEGLPPYIAEKFYQRRSESFEEGQINWNALAYGD

Query:  ITNNIQALC-------------LKD---------------------------------------------------------------------------
        I++ +Q +C             +KD                                                                           
Subjt:  ITNNIQALC-------------LKD---------------------------------------------------------------------------

Query:  -------------------SSSEAESFDSSQYSDD--AIPCTG-----C---INVLTRDQEHMLDLIEELPDEASRRTALLKLCNSLEEQKSKAQEFEPI
                           SSSE E +  S+ SDD  AIPCTG     C   INV+T+DQ+ + DLIE++PD  ++RT LLKL  SLEEQ  +     PI
Subjt:  -------------------SSSEAESFDSSQYSDD--AIPCTG-----C---INVLTRDQEHMLDLIEELPDEASRRTALLKLCNSLEEQKSKAQEFEPI

A0A5D3BEY3 Enzymatic polyprotein6.1e-3131.18Show/hide
Query:  DMVNQLVYTLMKHFVGRTTVYSNQATEALLKMRCRKMNDFKWYKDVFMACVYNLTSCRDEIWKRKFMEGLPPYIAEKFYQRRSESFEEGQINWNALAYGD
        DMVNQL+YT+ KHF+G T ++ N ATEALL ++C KM+ +KWYKD FMA +Y LT+C  +IWK+KF+EGLP YI++KFYQ  + +    QI+W  L YGD
Subjt:  DMVNQLVYTLMKHFVGRTTVYSNQATEALLKMRCRKMNDFKWYKDVFMACVYNLTSCRDEIWKRKFMEGLPPYIAEKFYQRRSESFEEGQINWNALAYGD

Query:  ITNNIQALC-------------------------------------------------------------------------------------------
        I++ +Q +C                                                                                           
Subjt:  ITNNIQALC-------------------------------------------------------------------------------------------

Query:  -----------LKD---------------------------------------------SSSEAESFDSSQYSDD--AIPCTG-----C---INVLTRDQ
                   LKD                                             SSSE E +  S  SDD  AIPCTG     C   INV+T+DQ
Subjt:  -----------LKD---------------------------------------------SSSEAESFDSSQYSDD--AIPCTG-----C---INVLTRDQ

Query:  EHMLDLIEELPDEASRRTALLKLCNSLEEQKSKAQEFEPI
        E + DLIE++PDE ++RT LLKL  SLEEQ  +     PI
Subjt:  EHMLDLIEELPDEASRRTALLKLCNSLEEQKSKAQEFEPI

A0A5D3DIF5 Uncharacterized protein2.7e-3433.46Show/hide
Query:  VNQLVYTLMKHFVGRTTVYSNQATEALLKMRCRKMNDFKWYKDVFMACVYNLTSCRDEIWKRKFMEGLPPYIAEKFYQRRSESFEEGQINWNALAYGDIT
        VN +VY  +KHFVGRTT+YS+Q+ EALL M+C KM+DFKWYKD FM+ +YN T CRD +WK K++EGL  Y+ EKFY     +     I+W  ++YGDI 
Subjt:  VNQLVYTLMKHFVGRTTVYSNQATEALLKMRCRKMNDFKWYKDVFMACVYNLTSCRDEIWKRKFMEGLPPYIAEKFYQRRSESFEEGQINWNALAYGDIT

Query:  NNIQALC--------------------------------------------------------------------------------------------L
        + IQ +C                                                                                            L
Subjt:  NNIQALC--------------------------------------------------------------------------------------------L

Query:  KDSSSEAESFDSSQYSDDAIPCTGCINVLTRDQEHMLDLIEELPDEASRRTALLKLCNSLEEQKSKAQE
        ++SS E  S ++   +++AIPC+ CINVLT  Q+ +LD+IEE+ DEA R+  LL+LC  LE    K ++
Subjt:  KDSSSEAESFDSSQYSDDAIPCTGCINVLTRDQEHMLDLIEELPDEASRRTALLKLCNSLEEQKSKAQE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACAAACTGGACATGGTCAATCAATTGGTGTACACCTTAATGAAGCATTTTGTAGGACGTACAACCGTATATTCCAATCAAGCCACAGAGGCTCTCTTGAAAAT
GAGATGTCGAAAGATGAACGACTTCAAGTGGTATAAAGACGTCTTTATGGCTTGTGTTTATAATCTCACTTCCTGTAGAGATGAAATCTGGAAGCGAAAGTTCATGGAAG
GATTACCCCCTTACATTGCAGAGAAGTTTTATCAAAGAAGGTCCGAAAGTTTTGAAGAAGGACAGATCAATTGGAATGCCCTCGCCTACGGGGACATTACCAACAATATC
CAGGCATTATGCTTAAAAGATTCCTCCTCTGAAGCAGAATCTTTCGACTCCTCCCAATATTCAGACGATGCAATACCATGCACCGGTTGTATAAATGTTCTAACAAGAGA
TCAGGAACATATGCTTGATCTTATAGAAGAACTTCCAGACGAAGCCTCCCGAAGAACAGCCCTTCTTAAGCTTTGCAACTCTCTCGAAGAACAAAAGTCGAAAGCTCAAG
AATTCGAGCCAATATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAACAAACTGGACATGGTCAATCAATTGGTGTACACCTTAATGAAGCATTTTGTAGGACGTACAACCGTATATTCCAATCAAGCCACAGAGGCTCTCTTGAAAAT
GAGATGTCGAAAGATGAACGACTTCAAGTGGTATAAAGACGTCTTTATGGCTTGTGTTTATAATCTCACTTCCTGTAGAGATGAAATCTGGAAGCGAAAGTTCATGGAAG
GATTACCCCCTTACATTGCAGAGAAGTTTTATCAAAGAAGGTCCGAAAGTTTTGAAGAAGGACAGATCAATTGGAATGCCCTCGCCTACGGGGACATTACCAACAATATC
CAGGCATTATGCTTAAAAGATTCCTCCTCTGAAGCAGAATCTTTCGACTCCTCCCAATATTCAGACGATGCAATACCATGCACCGGTTGTATAAATGTTCTAACAAGAGA
TCAGGAACATATGCTTGATCTTATAGAAGAACTTCCAGACGAAGCCTCCCGAAGAACAGCCCTTCTTAAGCTTTGCAACTCTCTCGAAGAACAAAAGTCGAAAGCTCAAG
AATTCGAGCCAATATAA
Protein sequenceShow/hide protein sequence
MENKLDMVNQLVYTLMKHFVGRTTVYSNQATEALLKMRCRKMNDFKWYKDVFMACVYNLTSCRDEIWKRKFMEGLPPYIAEKFYQRRSESFEEGQINWNALAYGDITNNI
QALCLKDSSSEAESFDSSQYSDDAIPCTGCINVLTRDQEHMLDLIEELPDEASRRTALLKLCNSLEEQKSKAQEFEPI