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Lsi04G010300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi04G010300
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr04:11790513..11790740
RNA-Seq ExpressionLsi04G010300
SyntenyLsi04G010300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599948.1 hypothetical protein SDJN03_05181, partial [Cucurbita argyrosperma subsp. sororia]3.2e-1769.33Show/hide
Query:  MIRIKDLLLLFLFVF-FVLGAGVCSSACRLPCHRVAVVGAQKH-EEMGDGSLDDDSKDNDPYRMYGDVPSPGVGH
        +IRI+ LLLL L VF FVL A VC++ACR PC+ VAV  AQ+H E+M +G+LDD++KDNDPYRMYGDVPSPGVGH
Subjt:  MIRIKDLLLLFLFVF-FVLGAGVCSSACRLPCHRVAVVGAQKH-EEMGDGSLDDDSKDNDPYRMYGDVPSPGVGH
KGN50727.1 hypothetical protein Csa_005780 [Cucumis sativus]2.6e-2784Show/hide
Query:  MKMIRIKDLLLLFLFVFFVLGAGVCSSACRLPCHRVAVVGAQKHEEMGDGSLDDDSKDNDPYRMYGDVPSPGVGH
        +KMIRIK+LLLL L +FFV G GVCSSACRLPCHRVA+  AQ+HEE+GDGSLDDDSKDNDPYRMYGDVPSPGVGH
Subjt:  MKMIRIKDLLLLFLFVFFVLGAGVCSSACRLPCHRVAVVGAQKHEEMGDGSLDDDSKDNDPYRMYGDVPSPGVGH
TrEMBL top hitse value%identityAlignment
A0A0A0KQN4 Uncharacterized protein1.3e-2784Show/hide
Query:  MKMIRIKDLLLLFLFVFFVLGAGVCSSACRLPCHRVAVVGAQKHEEMGDGSLDDDSKDNDPYRMYGDVPSPGVGH
        +KMIRIK+LLLL L +FFV G GVCSSACRLPCHRVA+  AQ+HEE+GDGSLDDDSKDNDPYRMYGDVPSPGVGH
Subjt:  MKMIRIKDLLLLFLFVFFVLGAGVCSSACRLPCHRVAVVGAQKHEEMGDGSLDDDSKDNDPYRMYGDVPSPGVGH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATGATCAGAATCAAAGACCTTCTTCTTCTTTTTCTCTTCGTCTTCTTTGTTCTCGGTGCCGGAGTTTGCAGCTCTGCCTGTCGTTTGCCGTGCCATCGTGTAGC
GGTCGTCGGAGCTCAAAAACATGAAGAAATGGGAGATGGGTCATTGGATGATGATTCAAAGGATAATGATCCTTATAGAATGTATGGTGATGTTCCAAGCCCTGGTGTTG
GCCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGATGATCAGAATCAAAGACCTTCTTCTTCTTTTTCTCTTCGTCTTCTTTGTTCTCGGTGCCGGAGTTTGCAGCTCTGCCTGTCGTTTGCCGTGCCATCGTGTAGC
GGTCGTCGGAGCTCAAAAACATGAAGAAATGGGAGATGGGTCATTGGATGATGATTCAAAGGATAATGATCCTTATAGAATGTATGGTGATGTTCCAAGCCCTGGTGTTG
GCCACTGA
Protein sequenceShow/hide protein sequence
MKMIRIKDLLLLFLFVFFVLGAGVCSSACRLPCHRVAVVGAQKHEEMGDGSLDDDSKDNDPYRMYGDVPSPGVGH